RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 GNB1LQ9BYB4 327 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 TMEM126AQ9H061 195 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 NDUFB11Q9NX14 153 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 A0A1W2PNN7 141 aa2.48□□□□□ -2.01
BRCA1-217ENST00000487825 S100A8P05109 93 aa2.48□□□□□ -2.01
BRCA1-217ENST00000487825 IAPPP10997 89 aa2.48□□□□□ -2.01
BRCA1-217ENST00000487825 REG3AQ06141 175 aa2.48□□□□□ -2.01
BRCA1-217ENST00000487825 IL15RAQ13261 267 aa2.48□□□□□ -2.01
BRCA1-217ENST00000487825 PDE6HQ13956 83 aa2.48□□□□□ -2.01
BRCA1-217ENST00000487825 C8orf59Q8N0T1 100 aaPredicted RBP2.48□□□□□ -2.01
BRCA1-217ENST00000487825 EXOC3-AS1Q8N2X6 119 aa2.48□□□□□ -2.01
BRCA1-217ENST00000487825 PLEKHB2Q96CS7 222 aa2.48□□□□□ -2.01
BRCA1-217ENST00000487825 RNASE7Q9H1E1 156 aaKnown RBP2.48□□□□□ -2.01
BRCA1-217ENST00000487825 NAA60Q9H7X0 242 aa2.48□□□□□ -2.01
BRCA1-217ENST00000487825 LENEPQ9Y5L5 61 aa2.48□□□□□ -2.01
BRCA1-217ENST00000487825 GVQW2A0A096LPI5 108 aaPredicted RBP2.47□□□□□ -2.01
BRCA1-217ENST00000487825 CCDC160A6NGH7 325 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 A8MWV9 139 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 COX7A2P2O60397 106 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 FGF6P10767 208 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 UBE2D3P61077 147 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 UBE2D2P62837 147 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 GNG5P63218 68 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 EIF5AP63241 154 aaKnown RBP2.47□□□□□ -2.01
BRCA1-217ENST00000487825 SLC38A11Q08AI6 406 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 KIAA0087Q14695 138 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 C6orf99Q4VX62 202 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 CENPWQ5EE01 88 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 RNASE10Q5GAN6 216 aaKnown RBP2.47□□□□□ -2.01
BRCA1-217ENST00000487825 C10orf113Q5VZT2 155 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 PHF5AQ7RTV0 110 aaKnown RBP2.47□□□□□ -2.01
BRCA1-217ENST00000487825 LINC00337Q8N6G1 96 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 RAB2BQ8WUD1 216 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 KCNS1Q96KK3 526 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 HSPB8Q9UJY1 196 aa2.47□□□□□ -2.01
BRCA1-217ENST00000487825 TRBV7-3A0A075B6L6 115 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 IGHV6-1A0A0B4J1U7 121 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 TRAV21A0A0B4J279 112 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 TRBV10-1A0A0K0K1A3 114 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 RBAKDNA6NC62 111 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 TMEM250H0YL14 139 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 H3BP45 60 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 J3KT08 172 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 K7ERU9 68 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 NDUFC2O95298 119 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 METTL15P1P0C7V9 234 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 TAS2R19P59542 299 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 RRAS2P62070 204 aaPredicted RBP2.46□□□□□ -2.02
BRCA1-217ENST00000487825 GNGT1P63211 74 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 IFITM3Q01628 133 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 IZUMO2Q6UXV1 221 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 OR5A1Q8NGJ0 315 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 TERB2Q8NHR7 220 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 TSKUQ8WUA8 353 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 S100A16Q96FQ6 103 aaKnown RBP2.46□□□□□ -2.02
BRCA1-217ENST00000487825 C14orf144Q96I85 54 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 CIB3Q96Q77 187 aaPredicted RBP2.46□□□□□ -2.02
BRCA1-217ENST00000487825 EIF5A2Q9GZV4 153 aaKnown RBP2.46□□□□□ -2.02
BRCA1-217ENST00000487825 VCXQ9H320 206 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 UQCC1Q9NVA1 299 aa2.46□□□□□ -2.02
BRCA1-217ENST00000487825 TXNL4BQ9NX01 149 aaKnown RBP2.46□□□□□ -2.02
BRCA1-217ENST00000487825 SMIM26A0A096LP01 95 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 LOC389332A0A1B0GUA5 103 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 FNDC10F2Z333 226 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 INMT-MINDY4F8WBC2 141 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-217ENST00000487825 RGS5O15539 181 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 RNASE3P12724 160 aaKnown RBP2.45□□□□□ -2.02
BRCA1-217ENST00000487825 ZNF25P17030 456 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-217ENST00000487825 SDC2P34741 201 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 RAB5CP51148 216 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 JOSD1Q15040 202 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-217ENST00000487825 SS18Q15532 418 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 C9orf116Q5BN46 136 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-217ENST00000487825 COA6Q5JTJ3 125 aaKnown RBP2.45□□□□□ -2.02
BRCA1-217ENST00000487825 UBE2NLQ5JXB2 153 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 SPANXN5Q5MJ07 72 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 DNLZQ5SXM8 178 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 FP248Q71RG6 208 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-217ENST00000487825 LYZL2Q7Z4W2 148 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 TMEM252Q8N6L7 170 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 LINC00304Q8N9R0 145 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 C20orf203Q8NBC4 194 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 CARD19Q96LW7 228 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 NPVFQ9HCQ7 196 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 SCN3BQ9NY72 215 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 TMEM14CQ9P0S9 112 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 RBM12B-AS1Q9P1G2 102 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 COMMD3Q9UBI1 195 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 TIMM9Q9Y5J7 89 aa2.45□□□□□ -2.02
BRCA1-217ENST00000487825 SYNGR2O43760 224 aa2.44□□□□□ -2.02
BRCA1-217ENST00000487825 PYYP10082 97 aa2.44□□□□□ -2.02
BRCA1-217ENST00000487825 HERVK_113P61574 105 aa2.44□□□□□ -2.02
BRCA1-217ENST00000487825 NTM-AS1Q6ZSK4 140 aa2.44□□□□□ -2.02
BRCA1-217ENST00000487825 NUP35Q8NFH5 326 aa2.44□□□□□ -2.02
BRCA1-217ENST00000487825 MBD3L1Q8WWY6 194 aa2.44□□□□□ -2.02
BRCA1-217ENST00000487825 LINC00846Q9NV44 126 aa2.44□□□□□ -2.02
BRCA1-217ENST00000487825 IGKV2-28A0A075B6P5 120 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 LOC107984640A0A0U1RRK4 108 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 F6UZH7 168 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms