RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, human

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC22C-215	ENST00000487701	FAT1	Q14517	4588 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	DNAH8	Q96JB1	4490 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	TRAV8-4	A0A0B4J246	113 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	TCAP	O15273	167 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	PRSS1	P07477	247 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	XG	P55808	180 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	RPL39	P62891	51 aa	Known RBP	4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	HAMP	P81172	84 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	RHEB	Q15382	184 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	OR5A1	Q8NGJ0	315 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	FAM104A	Q969W3	186 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	KIR2DL4	Q99706	377 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	CDC42SE2	Q9NRR3	84 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	UBE2D4	Q9Y2X8	147 aa		4.18	□□□□□ -1.74
SEC22C-215	ENST00000487701	FLG2	Q5D862	2391 aa	Predicted RBP	4.17	□□□□□ -1.74
SEC22C-215	ENST00000487701	TRAV9-1	A0A075B6T8	112 aa		4.17	□□□□□ -1.74
SEC22C-215	ENST00000487701	KIAA1644	Q3SXP7	199 aa		4.17	□□□□□ -1.74
SEC22C-215	ENST00000487701	RNASE13	Q5GAN3	156 aa	Known RBP	4.17	□□□□□ -1.74
SEC22C-215	ENST00000487701		Q6ZUT4	128 aa		4.17	□□□□□ -1.74
SEC22C-215	ENST00000487701	ZNF664	Q8N3J9	261 aa		4.17	□□□□□ -1.74
SEC22C-215	ENST00000487701	C15orf56	Q8N910	161 aa		4.17	□□□□□ -1.74
SEC22C-215	ENST00000487701	TMEM101	Q96IK0	257 aa		4.17	□□□□□ -1.74
SEC22C-215	ENST00000487701	RPS10P5	Q9NQ39	176 aa		4.17	□□□□□ -1.74
SEC22C-215	ENST00000487701	CSDC2	Q9Y534	153 aa	Known RBP	4.17	□□□□□ -1.74
SEC22C-215	ENST00000487701	ABCA13	Q86UQ4	5058 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701	SRRM2	Q9UQ35	2752 aa	Known RBP	4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701	LOC389332	A0A1B0GUA5	103 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701	LINC00959	A0A1B0GUT2	108 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701	APOC3	P02656	99 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701	S100P	P25815	95 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701	C14orf177	Q52M58	125 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701		Q6ZSA8	131 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701		Q8N8P6	123 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701	TIMM21	Q9BVV7	248 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701	MAP1LC3A	Q9H492	121 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701	LAMTOR2	Q9Y2Q5	125 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701	PCLO	Q9Y6V0	5065 aa		4.16	□□□□□ -1.74
SEC22C-215	ENST00000487701	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.15	□□□□□ -1.75
SEC22C-215	ENST00000487701	CCL25	O15444	150 aa		4.15	□□□□□ -1.75
SEC22C-215	ENST00000487701	XCL1	P47992	114 aa		4.15	□□□□□ -1.75
SEC22C-215	ENST00000487701	OPRPN	Q99935	248 aa	Predicted RBP	4.15	□□□□□ -1.75
SEC22C-215	ENST00000487701	GNB1L	Q9BYB4	327 aa		4.15	□□□□□ -1.75
SEC22C-215	ENST00000487701	TRAV13-1	A0A0B4J241	112 aa		4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	SNAPIN	O95295	136 aa		4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	RAB5A	P20339	215 aa		4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	IFI27	P40305	119 aa	Predicted RBP	4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	CNBP	P62633	177 aa	Known RBP	4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	MRPS36	P82909	103 aa	Known RBP	4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	SS18	Q15532	418 aa		4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	HIGD2B	Q4VC39	106 aa		4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	PAPPA-AS1	Q5QFB9	102 aa		4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	SERTAD4-AS1	Q5TG53	156 aa		4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	SLC7A5P1	Q8MH63	180 aa		4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	SVBP	Q8N300	66 aa		4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	YPEL4	Q96NS1	127 aa		4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	SPANXA1	Q9NS26	97 aa		4.14	□□□□□ -1.75
SEC22C-215	ENST00000487701	IGLV4-3	A0A075B6K6	122 aa		4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	PANO1	I0J062	215 aa		4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	SMR3B	P02814	79 aa	Predicted RBP	4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	MT-ND6	P03923	174 aa		4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	SMAGP	Q0VAQ4	97 aa		4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	NDUFA5	Q16718	116 aa		4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	CD164L2	Q6UWJ8	174 aa		4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	C2orf66	Q6UXQ4	117 aa		4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	SCX	Q7RTU7	201 aa		4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	C9orf163	Q8N9P6	203 aa		4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	LINC00526	Q96FQ7	95 aa		4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	NXT2	Q9NPJ8	142 aa	Known RBP	4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	PYGO1	Q9Y3Y4	419 aa		4.13	□□□□□ -1.75
SEC22C-215	ENST00000487701	IGIP	A6NJ69	53 aa		4.12	□□□□□ -1.75
SEC22C-215	ENST00000487701	C1orf196	B1AJZ1	125 aa		4.12	□□□□□ -1.75
SEC22C-215	ENST00000487701		K7EMI3	77 aa		4.12	□□□□□ -1.75
SEC22C-215	ENST00000487701	FABP9	Q0Z7S8	132 aa		4.12	□□□□□ -1.75
SEC22C-215	ENST00000487701	COX19	Q49B96	90 aa		4.12	□□□□□ -1.75
SEC22C-215	ENST00000487701	ORMDL2	Q53FV1	153 aa		4.12	□□□□□ -1.75
SEC22C-215	ENST00000487701	ZC2HC1B	Q5TFG8	222 aa		4.12	□□□□□ -1.75
SEC22C-215	ENST00000487701	SDIM1	Q6ZPB5	146 aa		4.12	□□□□□ -1.75
SEC22C-215	ENST00000487701	LINC00173	Q6ZV60	143 aa		4.12	□□□□□ -1.75
SEC22C-215	ENST00000487701	CBLN2	Q8IUK8	224 aa		4.12	□□□□□ -1.75
SEC22C-215	ENST00000487701	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701	IGHV1-58	A0A0C4DH39	117 aa		4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701	LINC01546	A6NGU7	62 aa		4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701	COX7A2L	O14548	114 aa		4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701		Q5VSD8	79 aa		4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701	C5orf38	Q86SI9	138 aa		4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701	CIRBP-AS1	Q8TBR5	109 aa		4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701	TMEM141	Q96I45	108 aa		4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701	CHAC1	Q9BUX1	264 aa		4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701	CYSLTR1	Q9Y271	337 aa		4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701	TRAPPC1	Q9Y5R8	145 aa		4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.11	□□□□□ -1.75
SEC22C-215	ENST00000487701	EPM2A	B3EWF7	344 aa		4.1	□□□□□ -1.75
SEC22C-215	ENST00000487701	CHTF8	P0CG12	524 aa		4.1	□□□□□ -1.75
SEC22C-215	ENST00000487701	UBE2D1	P51668	147 aa		4.1	□□□□□ -1.75
SEC22C-215	ENST00000487701	COX6A2	Q02221	97 aa		4.1	□□□□□ -1.75
SEC22C-215	ENST00000487701	LINC00242	Q5T6M2	205 aa		4.1	□□□□□ -1.75
SEC22C-215	ENST00000487701	SMIM29	Q86T20	159 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms