RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 VCYO14598 125 aa7.89□□□□□ -1.15
SREBF1-215ENST00000487401 PPP1R17O96001 155 aa7.89□□□□□ -1.15
SREBF1-215ENST00000487401 FCER1GP30273 86 aa7.89□□□□□ -1.15
SREBF1-215ENST00000487401 POLR2KP53803 58 aaKnown RBP7.89□□□□□ -1.15
SREBF1-215ENST00000487401 COX19Q49B96 90 aa7.89□□□□□ -1.15
SREBF1-215ENST00000487401 Q6ZRU5 148 aa7.89□□□□□ -1.15
SREBF1-215ENST00000487401 PRSS3P2Q8NHM4 247 aa7.89□□□□□ -1.15
SREBF1-215ENST00000487401 TMEM18Q96B42 140 aa7.89□□□□□ -1.15
SREBF1-215ENST00000487401 V9GYV3 84 aa7.89□□□□□ -1.15
SREBF1-215ENST00000487401 TRBV27A0A0K0K1C4 114 aa7.88□□□□□ -1.15
SREBF1-215ENST00000487401 SMAGPQ0VAQ4 97 aa7.88□□□□□ -1.15
SREBF1-215ENST00000487401 MRPL52Q86TS9 123 aaKnown RBP7.88□□□□□ -1.15
SREBF1-215ENST00000487401 ZNF664Q8N3J9 261 aa7.88□□□□□ -1.15
SREBF1-215ENST00000487401 NUP35Q8NFH5 326 aa7.88□□□□□ -1.15
SREBF1-215ENST00000487401 CDC42SE2Q9NRR3 84 aa7.88□□□□□ -1.15
SREBF1-215ENST00000487401 PKIGQ9Y2B9 76 aa7.88□□□□□ -1.15
SREBF1-215ENST00000487401 SMKR1H3BMG3 65 aa7.87□□□□□ -1.15
SREBF1-215ENST00000487401 CD164L2Q6UWJ8 174 aa7.87□□□□□ -1.15
SREBF1-215ENST00000487401 STPG4Q8N801 248 aa7.87□□□□□ -1.15
SREBF1-215ENST00000487401 LINC00474Q9P2X8 69 aa7.87□□□□□ -1.15
SREBF1-215ENST00000487401 NAT8BQ9UHF3 227 aa7.87□□□□□ -1.15
SREBF1-215ENST00000487401 PLA2G2DQ9UNK4 145 aa7.87□□□□□ -1.15
SREBF1-215ENST00000487401 ZNF561-AS1K7EIQ3 104 aa7.86□□□□□ -1.15
SREBF1-215ENST00000487401 KIR2DL4Q99706 377 aa7.86□□□□□ -1.15
SREBF1-215ENST00000487401 GNB1LQ9BYB4 327 aa7.86□□□□□ -1.15
SREBF1-215ENST00000487401 MRPL18Q9H0U6 180 aaKnown RBP7.86□□□□□ -1.15
SREBF1-215ENST00000487401 SMIM27A0A1W2PRY6 76 aa7.85□□□□□ -1.15
SREBF1-215ENST00000487401 MT-ND6P03923 174 aa7.85□□□□□ -1.15
SREBF1-215ENST00000487401 MALP21145 153 aa7.85□□□□□ -1.15
SREBF1-215ENST00000487401 SUMO2P61956 95 aaKnown RBP7.85□□□□□ -1.15
SREBF1-215ENST00000487401 LINC00526Q96FQ7 95 aa7.85□□□□□ -1.15
SREBF1-215ENST00000487401 CARD19Q96LW7 228 aa7.85□□□□□ -1.15
SREBF1-215ENST00000487401 A0A096LNI7 61 aa7.84□□□□□ -1.15
SREBF1-215ENST00000487401 SYCNQ0VAF6 134 aa7.84□□□□□ -1.15
SREBF1-215ENST00000487401 NRACQ8N912 160 aa7.84□□□□□ -1.15
SREBF1-215ENST00000487401 A0A1B0GW15 77 aa7.83□□□□□ -1.16
SREBF1-215ENST00000487401 TSTD3H0UI37 97 aa7.83□□□□□ -1.16
SREBF1-215ENST00000487401 COX7A2LO14548 114 aa7.83□□□□□ -1.16
SREBF1-215ENST00000487401 CAMPP49913 170 aa7.83□□□□□ -1.16
SREBF1-215ENST00000487401 MRPL51Q4U2R6 128 aaKnown RBP7.83□□□□□ -1.16
SREBF1-215ENST00000487401 FAM104BQ5XKR9 115 aa7.83□□□□□ -1.16
SREBF1-215ENST00000487401 TMEM136Q6ZRR5 245 aa7.83□□□□□ -1.16
SREBF1-215ENST00000487401 CSDC2Q9Y534 153 aaKnown RBP7.83□□□□□ -1.16
SREBF1-215ENST00000487401 TRAV13-1A0A0B4J241 112 aa7.82□□□□□ -1.16
SREBF1-215ENST00000487401 NUPR1O60356 82 aa7.82□□□□□ -1.16
SREBF1-215ENST00000487401 CKS2P33552 79 aa7.82□□□□□ -1.16
SREBF1-215ENST00000487401 C20orf78Q9BR46 151 aa7.82□□□□□ -1.16
SREBF1-215ENST00000487401 UBE2D4Q9Y2X8 147 aa7.82□□□□□ -1.16
SREBF1-215ENST00000487401 TCAPO15273 167 aa7.81□□□□□ -1.16
SREBF1-215ENST00000487401 MT1HL1P0DM35 61 aa7.81□□□□□ -1.16
SREBF1-215ENST00000487401 DDTP30046 118 aa7.81□□□□□ -1.16
SREBF1-215ENST00000487401 PRR3P79522 188 aaKnown RBP7.81□□□□□ -1.16
SREBF1-215ENST00000487401 RNASE13Q5GAN3 156 aaKnown RBP7.81□□□□□ -1.16
SREBF1-215ENST00000487401 IGLV4-69A0A075B6H9 119 aa7.8□□□□□ -1.16
SREBF1-215ENST00000487401 GAGE2BQ13066 116 aa7.8□□□□□ -1.16
SREBF1-215ENST00000487401 TIMM21Q9BVV7 248 aa7.8□□□□□ -1.16
SREBF1-215ENST00000487401 PRO1933Q9H354 126 aa7.8□□□□□ -1.16
SREBF1-215ENST00000487401 UBR4Q5T4S7 5183 aa7.79□□□□□ -1.16
SREBF1-215ENST00000487401 LOC107984640A0A0U1RRK4 108 aa7.79□□□□□ -1.16
SREBF1-215ENST00000487401 SERF1AO75920 110 aa7.79□□□□□ -1.16
SREBF1-215ENST00000487401 APOMO95445 188 aa7.79□□□□□ -1.16
SREBF1-215ENST00000487401 LINC00310P59036 64 aa7.79□□□□□ -1.16
SREBF1-215ENST00000487401 RPL32P62910 135 aaKnown RBP7.79□□□□□ -1.16
SREBF1-215ENST00000487401 Q6ZUT4 128 aa7.79□□□□□ -1.16
SREBF1-215ENST00000487401 C5orf38Q86SI9 138 aa7.79□□□□□ -1.16
SREBF1-215ENST00000487401 BAGE3Q86Y29 109 aa7.79□□□□□ -1.16
SREBF1-215ENST00000487401 CAMK2N2Q96S95 79 aa7.79□□□□□ -1.16
SREBF1-215ENST00000487401 TNFRSF6BO95407 300 aa7.78□□□□□ -1.16
SREBF1-215ENST00000487401 SCGB1D1O95968 90 aa7.78□□□□□ -1.16
SREBF1-215ENST00000487401 PTTG1IPP53801 180 aa7.78□□□□□ -1.16
SREBF1-215ENST00000487401 HBBP68871 147 aa7.78□□□□□ -1.16
SREBF1-215ENST00000487401 MRPL54Q6P161 138 aaKnown RBP7.78□□□□□ -1.16
SREBF1-215ENST00000487401 C14orf144Q96I85 54 aa7.78□□□□□ -1.16
SREBF1-215ENST00000487401 C2orf48Q96LS8 159 aa7.78□□□□□ -1.16
SREBF1-215ENST00000487401 D6R8Y8 96 aa7.77□□□□□ -1.17
SREBF1-215ENST00000487401 Q6ZRP5 223 aa7.77□□□□□ -1.17
SREBF1-215ENST00000487401 ATP5L2Q7Z4Y8 100 aa7.77□□□□□ -1.17
SREBF1-215ENST00000487401 PPBPP02775 128 aa7.76□□□□□ -1.17
SREBF1-215ENST00000487401 RPL39P62891 51 aaKnown RBP7.76□□□□□ -1.17
SREBF1-215ENST00000487401 SPAG11BQ08648 103 aa7.76□□□□□ -1.17
SREBF1-215ENST00000487401 SPINK6Q6UWN8 80 aa7.76□□□□□ -1.17
SREBF1-215ENST00000487401 SMIM2Q9BVW6 85 aa7.76□□□□□ -1.17
SREBF1-215ENST00000487401 SPANXA1Q9NS26 97 aa7.76□□□□□ -1.17
SREBF1-215ENST00000487401 TNXBP22105 4242 aa7.76□□□□□ -1.17
SREBF1-215ENST00000487401 A0A1B0GXF2 115 aa7.75□□□□□ -1.17
SREBF1-215ENST00000487401 KIAA1644Q3SXP7 199 aa7.75□□□□□ -1.17
SREBF1-215ENST00000487401 REG3GQ6UW15 175 aa7.75□□□□□ -1.17
SREBF1-215ENST00000487401 LINC01600Q96MT4 127 aa7.75□□□□□ -1.17
SREBF1-215ENST00000487401 NPYP01303 97 aa7.74□□□□□ -1.17
SREBF1-215ENST00000487401 MRPS36P82909 103 aaKnown RBP7.74□□□□□ -1.17
SREBF1-215ENST00000487401 RPL18AQ02543 176 aaKnown RBP7.74□□□□□ -1.17
SREBF1-215ENST00000487401 LBHQ53QV2 105 aaPredicted RBP7.74□□□□□ -1.17
SREBF1-215ENST00000487401 TEX43Q6ZNM6 134 aa7.74□□□□□ -1.17
SREBF1-215ENST00000487401 ORMDL3Q8N138 153 aa7.74□□□□□ -1.17
SREBF1-215ENST00000487401 OPRPNQ99935 248 aaPredicted RBP7.74□□□□□ -1.17
SREBF1-215ENST00000487401 A0A1W2PNN7 141 aa7.73□□□□□ -1.17
SREBF1-215ENST00000487401 F8WDY8 70 aa7.73□□□□□ -1.17
SREBF1-215ENST00000487401 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.73□□□□□ -1.17
SREBF1-215ENST00000487401 RNF151Q2KHN1 245 aa7.73□□□□□ -1.17
SREBF1-215ENST00000487401 ORAOV1Q8WV07 137 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms