RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 H0Y8G0 127 aa4.97□□□□□ -1.61
HOXA9-204ENST00000487384 K7EN84 100 aa4.97□□□□□ -1.61
HOXA9-204ENST00000487384 M0QXV9 152 aa4.97□□□□□ -1.61
HOXA9-204ENST00000487384 POLR2KP53803 58 aaKnown RBP4.97□□□□□ -1.61
HOXA9-204ENST00000487384 RNF151Q2KHN1 245 aa4.97□□□□□ -1.61
HOXA9-204ENST00000487384 KRTAP7-1Q8IUC3 87 aa4.97□□□□□ -1.61
HOXA9-204ENST00000487384 ORAOV1Q8WV07 137 aa4.97□□□□□ -1.61
HOXA9-204ENST00000487384 IMMP2LQ96T52 175 aa4.97□□□□□ -1.61
HOXA9-204ENST00000487384 BATF3Q9NR55 127 aa4.97□□□□□ -1.61
HOXA9-204ENST00000487384 KANTRA0A1W2PQU2 76 aa4.96□□□□□ -1.62
HOXA9-204ENST00000487384 PDE6DO43924 150 aa4.96□□□□□ -1.62
HOXA9-204ENST00000487384 FCER1GP30273 86 aa4.96□□□□□ -1.62
HOXA9-204ENST00000487384 ZNF345Q14585 488 aa4.96□□□□□ -1.62
HOXA9-204ENST00000487384 RGS21Q2M5E4 152 aa4.96□□□□□ -1.62
HOXA9-204ENST00000487384 UNQ6190/PRO20217Q6UXQ8 127 aa4.96□□□□□ -1.62
HOXA9-204ENST00000487384 Q6ZUT4 128 aa4.96□□□□□ -1.62
HOXA9-204ENST00000487384 OCC1Q8TAD7 63 aa4.96□□□□□ -1.62
HOXA9-204ENST00000487384 MRPL35Q9NZE8 188 aaKnown RBP4.96□□□□□ -1.62
HOXA9-204ENST00000487384 UBE2D4Q9Y2X8 147 aa4.96□□□□□ -1.62
HOXA9-204ENST00000487384 TRBV27A0A0K0K1C4 114 aa4.95□□□□□ -1.62
HOXA9-204ENST00000487384 SMKR1H3BMG3 65 aa4.95□□□□□ -1.62
HOXA9-204ENST00000487384 NDUFA1O15239 70 aa4.95□□□□□ -1.62
HOXA9-204ENST00000487384 XP32Q5T750 250 aa4.95□□□□□ -1.62
HOXA9-204ENST00000487384 OR10D4PQ8NGN7 298 aa4.95□□□□□ -1.62
HOXA9-204ENST00000487384 RETNLBQ9BQ08 111 aa4.95□□□□□ -1.62
HOXA9-204ENST00000487384 C6orf48Q9UBA6 75 aa4.95□□□□□ -1.62
HOXA9-204ENST00000487384 CARHSP1Q9Y2V2 147 aaKnown RBP4.95□□□□□ -1.62
HOXA9-204ENST00000487384 A0A087X002 238 aa4.94□□□□□ -1.62
HOXA9-204ENST00000487384 LOC105371267A0A1B0GV96 52 aa4.94□□□□□ -1.62
HOXA9-204ENST00000487384 GATCO43716 136 aaKnown RBP4.94□□□□□ -1.62
HOXA9-204ENST00000487384 SLC51BQ86UW2 128 aa4.94□□□□□ -1.62
HOXA9-204ENST00000487384 SMDT1Q9H4I9 107 aa4.94□□□□□ -1.62
HOXA9-204ENST00000487384 CSDC2Q9Y534 153 aaKnown RBP4.94□□□□□ -1.62
HOXA9-204ENST00000487384 TEX46H3BTG2 121 aa4.93□□□□□ -1.62
HOXA9-204ENST00000487384 VCYO14598 125 aa4.93□□□□□ -1.62
HOXA9-204ENST00000487384 ZNF861PO60384 105 aa4.93□□□□□ -1.62
HOXA9-204ENST00000487384 TLX1NBP0CAT3 122 aa4.93□□□□□ -1.62
HOXA9-204ENST00000487384 RAB4AP20338 218 aa4.93□□□□□ -1.62
HOXA9-204ENST00000487384 TMEM241Q24JQ0 296 aa4.93□□□□□ -1.62
HOXA9-204ENST00000487384 AMN1Q8IY45 258 aa4.93□□□□□ -1.62
HOXA9-204ENST00000487384 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
HOXA9-204ENST00000487384 IGHV3OR16-9A0A0B4J2B5 98 aa4.92□□□□□ -1.62
HOXA9-204ENST00000487384 HMSDA8MTL9 139 aa4.92□□□□□ -1.62
HOXA9-204ENST00000487384 A8MWL6 223 aa4.92□□□□□ -1.62
HOXA9-204ENST00000487384 RPL39P62891 51 aaKnown RBP4.92□□□□□ -1.62
HOXA9-204ENST00000487384 SMAGPQ0VAQ4 97 aa4.92□□□□□ -1.62
HOXA9-204ENST00000487384 C9orf129Q5T035 196 aaKnown RBP4.92□□□□□ -1.62
HOXA9-204ENST00000487384 TYMSOSQ8TAI1 123 aa4.92□□□□□ -1.62
HOXA9-204ENST00000487384 BORCS7Q96B45 105 aa4.92□□□□□ -1.62
HOXA9-204ENST00000487384 TMEM191AQ9H0A3 160 aa4.92□□□□□ -1.62
HOXA9-204ENST00000487384 A0A1B0GUT8 65 aa4.91□□□□□ -1.62
HOXA9-204ENST00000487384 F8WDY8 70 aa4.91□□□□□ -1.62
HOXA9-204ENST00000487384 SUMO2P61956 95 aaKnown RBP4.91□□□□□ -1.62
HOXA9-204ENST00000487384 NDUFA5Q16718 116 aa4.91□□□□□ -1.62
HOXA9-204ENST00000487384 C2orf82Q6UX34 121 aa4.91□□□□□ -1.62
HOXA9-204ENST00000487384 KIR2DL4Q99706 377 aa4.91□□□□□ -1.62
HOXA9-204ENST00000487384 ANAPC11Q9NYG5 84 aa4.91□□□□□ -1.62
HOXA9-204ENST00000487384 HIGD1CA8MV81 97 aa4.9□□□□□ -1.63
HOXA9-204ENST00000487384 CRYGAP11844 174 aa4.9□□□□□ -1.63
HOXA9-204ENST00000487384 NRACQ8N912 160 aa4.9□□□□□ -1.63
HOXA9-204ENST00000487384 FAM104AQ969W3 186 aa4.9□□□□□ -1.63
HOXA9-204ENST00000487384 TMEM18Q96B42 140 aa4.9□□□□□ -1.63
HOXA9-204ENST00000487384 TIMM21Q9BVV7 248 aa4.9□□□□□ -1.63
HOXA9-204ENST00000487384 IFITM10A6NMD0 228 aa4.89□□□□□ -1.63
HOXA9-204ENST00000487384 NDUFC2-KCTD14E9PQ53 114 aa4.89□□□□□ -1.63
HOXA9-204ENST00000487384 CEBPGP53567 150 aa4.89□□□□□ -1.63
HOXA9-204ENST00000487384 KIAA0087Q14695 138 aa4.89□□□□□ -1.63
HOXA9-204ENST00000487384 FAM231DQ6ZW35 169 aa4.89□□□□□ -1.63
HOXA9-204ENST00000487384 CTDSP1Q9GZU7 261 aa4.89□□□□□ -1.63
HOXA9-204ENST00000487384 TGIF2-C20orf24A0A0A6YYL0 155 aa4.88□□□□□ -1.63
HOXA9-204ENST00000487384 NUPR1O60356 82 aa4.88□□□□□ -1.63
HOXA9-204ENST00000487384 LINC00242Q5T6M2 205 aa4.88□□□□□ -1.63
HOXA9-204ENST00000487384 PACRGQ96M98 296 aaPredicted RBP4.88□□□□□ -1.63
HOXA9-204ENST00000487384 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
HOXA9-204ENST00000487384 C22orf24Q9Y442 160 aa4.88□□□□□ -1.63
HOXA9-204ENST00000487384 IGLV7-46A0A075B6I9 117 aa4.87□□□□□ -1.63
HOXA9-204ENST00000487384 TRBV30A0A0K0K1B3 111 aa4.87□□□□□ -1.63
HOXA9-204ENST00000487384 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
HOXA9-204ENST00000487384 PPP1R2P9O14990 202 aa4.87□□□□□ -1.63
HOXA9-204ENST00000487384 PPP1R17O96001 155 aa4.87□□□□□ -1.63
HOXA9-204ENST00000487384 HBBP68871 147 aa4.87□□□□□ -1.63
HOXA9-204ENST00000487384 TPRXLQ17RH7 258 aa4.87□□□□□ -1.63
HOXA9-204ENST00000487384 MRPL51Q4U2R6 128 aaKnown RBP4.87□□□□□ -1.63
HOXA9-204ENST00000487384 KRTAP13-2Q52LG2 175 aa4.87□□□□□ -1.63
HOXA9-204ENST00000487384 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
HOXA9-204ENST00000487384 XAGE1AQ9HD64 81 aa4.87□□□□□ -1.63
HOXA9-204ENST00000487384 RPL28P46779 137 aaKnown RBP4.86□□□□□ -1.63
HOXA9-204ENST00000487384 RIGQ13278 110 aa4.86□□□□□ -1.63
HOXA9-204ENST00000487384 LINC00173Q6ZV60 143 aa4.86□□□□□ -1.63
HOXA9-204ENST00000487384 LINC00304Q8N9R0 145 aa4.86□□□□□ -1.63
HOXA9-204ENST00000487384 VCX2Q9H322 139 aa4.86□□□□□ -1.63
HOXA9-204ENST00000487384 SPANXA1Q9NS26 97 aa4.86□□□□□ -1.63
HOXA9-204ENST00000487384 RPL37AP8A6NKH3 93 aa4.85□□□□□ -1.63
HOXA9-204ENST00000487384 ZNF727A8MUV8 499 aa4.85□□□□□ -1.63
HOXA9-204ENST00000487384 TCAPO15273 167 aa4.85□□□□□ -1.63
HOXA9-204ENST00000487384 BCE1O60756 84 aa4.85□□□□□ -1.63
HOXA9-204ENST00000487384 MRPS36P82909 103 aaKnown RBP4.85□□□□□ -1.63
HOXA9-204ENST00000487384 LBHQ53QV2 105 aaPredicted RBP4.85□□□□□ -1.63
HOXA9-204ENST00000487384 FAM104BQ5XKR9 115 aa4.85□□□□□ -1.63
HOXA9-204ENST00000487384 TOMM7Q9P0U1 55 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms