RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TRAV13-1A0A0B4J241 112 aa4.59□□□□□ -1.67
UBE4B-209ENST00000487244 KIAA1644Q3SXP7 199 aa4.59□□□□□ -1.67
UBE4B-209ENST00000487244 C10orf91Q5T1B1 145 aa4.59□□□□□ -1.67
UBE4B-209ENST00000487244 DGAT2L7PQ6IED9 249 aa4.59□□□□□ -1.67
UBE4B-209ENST00000487244 SDIM1Q6ZPB5 146 aa4.59□□□□□ -1.67
UBE4B-209ENST00000487244 IMMP2LQ96T52 175 aa4.59□□□□□ -1.67
UBE4B-209ENST00000487244 TIMM21Q9BVV7 248 aa4.59□□□□□ -1.67
UBE4B-209ENST00000487244 CSDC2Q9Y534 153 aaKnown RBP4.59□□□□□ -1.67
UBE4B-209ENST00000487244 DNAH8Q96JB1 4490 aa4.58□□□□□ -1.68
UBE4B-209ENST00000487244 CHTF8P0CG12 524 aa4.58□□□□□ -1.68
UBE4B-209ENST00000487244 SS18Q15532 418 aa4.58□□□□□ -1.68
UBE4B-209ENST00000487244 CD164L2Q6UWJ8 174 aa4.58□□□□□ -1.68
UBE4B-209ENST00000487244 CTDSP1Q9GZU7 261 aa4.58□□□□□ -1.68
UBE4B-209ENST00000487244 MAP1LC3AQ9H492 121 aa4.58□□□□□ -1.68
UBE4B-209ENST00000487244 CARHSP1Q9Y2V2 147 aaKnown RBP4.58□□□□□ -1.68
UBE4B-209ENST00000487244 DMBT1Q9UGM3 2413 aaPredicted RBP4.57□□□□□ -1.68
UBE4B-209ENST00000487244 IGHV3-64A0A075B6Q5 118 aa4.57□□□□□ -1.68
UBE4B-209ENST00000487244 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
UBE4B-209ENST00000487244 RAB5AP20339 215 aa4.57□□□□□ -1.68
UBE4B-209ENST00000487244 KRTAP10-4P60372 401 aaPredicted RBP4.57□□□□□ -1.68
UBE4B-209ENST00000487244 CFAP161Q6P656 301 aa4.57□□□□□ -1.68
UBE4B-209ENST00000487244 TMEM18Q96B42 140 aa4.57□□□□□ -1.68
UBE4B-209ENST00000487244 SPANXA1Q9NS26 97 aa4.57□□□□□ -1.68
UBE4B-209ENST00000487244 LAMTOR2Q9Y2Q5 125 aa4.57□□□□□ -1.68
UBE4B-209ENST00000487244 IGLV4-3A0A075B6K6 122 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 TRAV9-1A0A075B6T8 112 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 IGHV1-58A0A0C4DH39 117 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 C1orf196B1AJZ1 125 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 INAFM2P0DMQ5 153 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 IFI27P40305 119 aaPredicted RBP4.56□□□□□ -1.68
UBE4B-209ENST00000487244 MRPS36P82909 103 aaKnown RBP4.56□□□□□ -1.68
UBE4B-209ENST00000487244 COX6A2Q02221 97 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 SMAGPQ0VAQ4 97 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 CIRBPQ14011 172 aaKnown RBP4.56□□□□□ -1.68
UBE4B-209ENST00000487244 RHEBQ15382 184 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 ZC2HC1BQ5TFG8 222 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 C5orf38Q86SI9 138 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 Q8N8P6 123 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 RPS10P5Q9NQ39 176 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 MYCBP2O75592 4640 aa4.56□□□□□ -1.68
UBE4B-209ENST00000487244 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.55□□□□□ -1.68
UBE4B-209ENST00000487244 TGIF2-C20orf24A0A0A6YYL0 155 aa4.55□□□□□ -1.68
UBE4B-209ENST00000487244 IFITM10A6NMD0 228 aa4.55□□□□□ -1.68
UBE4B-209ENST00000487244 COX7A2LO14548 114 aa4.55□□□□□ -1.68
UBE4B-209ENST00000487244 APOC3P02656 99 aa4.55□□□□□ -1.68
UBE4B-209ENST00000487244 S100PP25815 95 aa4.55□□□□□ -1.68
UBE4B-209ENST00000487244 C2orf66Q6UXQ4 117 aa4.55□□□□□ -1.68
UBE4B-209ENST00000487244 LINC00173Q6ZV60 143 aa4.55□□□□□ -1.68
UBE4B-209ENST00000487244 PRSS3P2Q8NHM4 247 aa4.55□□□□□ -1.68
UBE4B-209ENST00000487244 SPACA4Q8TDM5 124 aa4.55□□□□□ -1.68
UBE4B-209ENST00000487244 IGLV4-69A0A075B6H9 119 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 A0A096LNI7 61 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 IGHV3OR16-9A0A0B4J2B5 98 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 IGKV2-24A0A0C4DH68 120 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 MALP21145 153 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 Q6ZRU5 148 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 TMEM141Q96I45 108 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 CARD19Q96LW7 228 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 ALKBH7Q9BT30 221 aaPredicted RBP4.54□□□□□ -1.68
UBE4B-209ENST00000487244 GNB1LQ9BYB4 327 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 NXT2Q9NPJ8 142 aaKnown RBP4.54□□□□□ -1.68
UBE4B-209ENST00000487244 CYSLTR1Q9Y271 337 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 PYGO1Q9Y3Y4 419 aa4.54□□□□□ -1.68
UBE4B-209ENST00000487244 A0A087WYN8 130 aa4.53□□□□□ -1.68
UBE4B-209ENST00000487244 IGIPA6NJ69 53 aa4.53□□□□□ -1.68
UBE4B-209ENST00000487244 SPAG11BQ08648 103 aa4.53□□□□□ -1.68
UBE4B-209ENST00000487244 SYCNQ0VAF6 134 aa4.53□□□□□ -1.68
UBE4B-209ENST00000487244 ORMDL2Q53FV1 153 aa4.53□□□□□ -1.68
UBE4B-209ENST00000487244 LINC00242Q5T6M2 205 aa4.53□□□□□ -1.68
UBE4B-209ENST00000487244 A0A0J9YXV3 536 aa4.52□□□□□ -1.69
UBE4B-209ENST00000487244 UBE2D1P51668 147 aa4.52□□□□□ -1.69
UBE4B-209ENST00000487244 HNRNPA3P51991 378 aaKnown RBP4.52□□□□□ -1.69
UBE4B-209ENST00000487244 FABP9Q0Z7S8 132 aa4.52□□□□□ -1.69
UBE4B-209ENST00000487244 MAJINQ3KP22 176 aa4.52□□□□□ -1.69
UBE4B-209ENST00000487244 TEX43Q6ZNM6 134 aa4.52□□□□□ -1.69
UBE4B-209ENST00000487244 SVBPQ8N300 66 aa4.52□□□□□ -1.69
UBE4B-209ENST00000487244 ORAOV1Q8WV07 137 aa4.52□□□□□ -1.69
UBE4B-209ENST00000487244 AMELXQ99217 191 aa4.52□□□□□ -1.69
UBE4B-209ENST00000487244 LINC01546A6NGU7 62 aa4.51□□□□□ -1.69
UBE4B-209ENST00000487244 K7EMI3 77 aa4.51□□□□□ -1.69
UBE4B-209ENST00000487244 SNAPINO95295 136 aa4.51□□□□□ -1.69
UBE4B-209ENST00000487244 MT-ND6P03923 174 aa4.51□□□□□ -1.69
UBE4B-209ENST00000487244 RPL37AP61513 92 aaKnown RBP4.51□□□□□ -1.69
UBE4B-209ENST00000487244 C10orf25Q5T742 122 aa4.51□□□□□ -1.69
UBE4B-209ENST00000487244 TOMM6Q96B49 74 aa4.51□□□□□ -1.69
UBE4B-209ENST00000487244 DPH3Q96FX2 82 aa4.51□□□□□ -1.69
UBE4B-209ENST00000487244 YPEL4Q96NS1 127 aa4.51□□□□□ -1.69
UBE4B-209ENST00000487244 CAMK2N2Q96S95 79 aa4.51□□□□□ -1.69
UBE4B-209ENST00000487244 PLAC8Q9NZF1 115 aa4.51□□□□□ -1.69
UBE4B-209ENST00000487244 A0A087WZ39 114 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.5□□□□□ -1.69
UBE4B-209ENST00000487244 APOMO95445 188 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 NDUFA5Q16718 116 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 COX19Q49B96 90 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 UNQ6190/PRO20217Q6UXQ8 127 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 Q6ZN92 141 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 CBLN2Q8IUK8 224 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 SLC7A5P1Q8MH63 180 aa4.5□□□□□ -1.69
UBE4B-209ENST00000487244 STPG4Q8N801 248 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms