RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TCAPO15273 167 aa15.21■□□□□ 0.03
LIME1-206ENST00000487026 APOMO95445 188 aa15.21■□□□□ 0.03
LIME1-206ENST00000487026 SPAG11BQ08648 103 aa15.21■□□□□ 0.03
LIME1-206ENST00000487026 SPINK6Q6UWN8 80 aa15.21■□□□□ 0.03
LIME1-206ENST00000487026 F8W036 122 aa15.2■□□□□ 0.02
LIME1-206ENST00000487026 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.2■□□□□ 0.02
LIME1-206ENST00000487026 SRSF9Q13242 221 aaKnown RBP eCLIP15.2■□□□□ 0.02
LIME1-206ENST00000487026 S100A8P05109 93 aa15.19■□□□□ 0.02
LIME1-206ENST00000487026 RPL18AQ02543 176 aaKnown RBP15.19■□□□□ 0.02
LIME1-206ENST00000487026 SPANXA1Q9NS26 97 aa15.18■□□□□ 0.02
LIME1-206ENST00000487026 C9orf116Q5BN46 136 aaPredicted RBP15.17■□□□□ 0.02
LIME1-206ENST00000487026 ORAOV1Q8WV07 137 aa15.16■□□□□ 0.02
LIME1-206ENST00000487026 IGHV3OR16-9A0A0B4J2B5 98 aa15.15■□□□□ 0.02
LIME1-206ENST00000487026 MRPS36P82909 103 aaKnown RBP15.15■□□□□ 0.02
LIME1-206ENST00000487026 REG3GQ6UW15 175 aa15.15■□□□□ 0.02
LIME1-206ENST00000487026 OR10D4PQ8NGN7 298 aa15.15■□□□□ 0.02
LIME1-206ENST00000487026 IFITM10A6NMD0 228 aa15.14■□□□□ 0.01
LIME1-206ENST00000487026 PPBPP02775 128 aa15.14■□□□□ 0.01
LIME1-206ENST00000487026 KRTAP10-8P60410 259 aa15.14■□□□□ 0.01
LIME1-206ENST00000487026 TMEM136Q6ZRR5 245 aa15.14■□□□□ 0.01
LIME1-206ENST00000487026 TMEM218A2RU14 115 aa15.13■□□□□ 0.01
LIME1-206ENST00000487026 PNRC1Q12796 327 aaPredicted RBP15.13■□□□□ 0.01
LIME1-206ENST00000487026 RNF151Q2KHN1 245 aa15.13■□□□□ 0.01
LIME1-206ENST00000487026 PHF5AQ7RTV0 110 aaKnown RBP15.13■□□□□ 0.01
LIME1-206ENST00000487026 ORMDL3Q8N138 153 aa15.13■□□□□ 0.01
LIME1-206ENST00000487026 C10orf25Q5T742 122 aa15.12■□□□□ 0.01
LIME1-206ENST00000487026 PRELID3AQ96N28 172 aa15.12■□□□□ 0.01
LIME1-206ENST00000487026 PSORS1C2Q9UIG4 136 aa15.12■□□□□ 0.01
LIME1-206ENST00000487026 RAB5AP20339 215 aa15.11■□□□□ 0.01
LIME1-206ENST00000487026 LRP2P98164 4655 aa15.11■□□□□ 0.01
LIME1-206ENST00000487026 UNQ6190/PRO20217Q6UXQ8 127 aa15.1■□□□□ 0.01
LIME1-206ENST00000487026 MRPL35Q9NZE8 188 aaKnown RBP15.1■□□□□ 0.01
LIME1-206ENST00000487026 LOC389332A0A1B0GUA5 103 aa15.09■□□□□ 0.01
LIME1-206ENST00000487026 MT-ND6P03923 174 aa15.09■□□□□ 0.01
LIME1-206ENST00000487026 NDUFA5Q16718 116 aa15.09■□□□□ 0.01
LIME1-206ENST00000487026 ATP5L2Q7Z4Y8 100 aa15.09■□□□□ 0.01
LIME1-206ENST00000487026 SEC11CQ9BY50 192 aa15.09■□□□□ 0.01
LIME1-206ENST00000487026 NDUFA1O15239 70 aa15.08■□□□□ 0
LIME1-206ENST00000487026 IFI27P40305 119 aaPredicted RBP15.08■□□□□ 0
LIME1-206ENST00000487026 FAM168BA1KXE4 195 aa15.07■□□□□ 0
LIME1-206ENST00000487026 IMMP2LQ96T52 175 aa15.07■□□□□ 0
LIME1-206ENST00000487026 IGLV4-3A0A075B6K6 122 aa15.06■□□□□ 0
LIME1-206ENST00000487026 TGIF2-C20orf24A0A0A6YYL0 155 aa15.06■□□□□ 0
LIME1-206ENST00000487026 F8WDY8 70 aa15.06■□□□□ 0
LIME1-206ENST00000487026 C1orf137Q5JT78 98 aa15.06■□□□□ 0
LIME1-206ENST00000487026 C6orf48Q9UBA6 75 aa15.06■□□□□ 0
LIME1-206ENST00000487026 LINC00242Q5T6M2 205 aa15.05■□□□□ -0
LIME1-206ENST00000487026 PYGO1Q9Y3Y4 419 aa15.05■□□□□ -0
LIME1-206ENST00000487026 MT-ND4LP03901 98 aa15.04■□□□□ -0
LIME1-206ENST00000487026 A0A087WZ39 114 aa15.03■□□□□ -0
LIME1-206ENST00000487026 KIAA0087Q14695 138 aa15.03■□□□□ -0
LIME1-206ENST00000487026 GAGE2EQ4V326 116 aa15.03■□□□□ -0
LIME1-206ENST00000487026 ZC2HC1BQ5TFG8 222 aa15.03■□□□□ -0
LIME1-206ENST00000487026 TMEM141Q96I45 108 aa15.03■□□□□ -0
LIME1-206ENST00000487026 GAGE2DQ9UEU5 116 aa15.03■□□□□ -0
LIME1-206ENST00000487026 PRSS47A8MTI9 375 aa15.02■□□□□ -0
LIME1-206ENST00000487026 ANAPC16Q96DE5 110 aa15.02■□□□□ -0
LIME1-206ENST00000487026 TLX1NBP0CAT3 122 aa15.01□□□□□ -0.01
LIME1-206ENST00000487026 KRTAP11-1Q8IUC1 163 aa15.01□□□□□ -0.01
LIME1-206ENST00000487026 MAP1LC3AQ9H492 121 aa15.01□□□□□ -0.01
LIME1-206ENST00000487026 ADCYAP1P18509 176 aa15□□□□□ -0.01
LIME1-206ENST00000487026 C10orf91Q5T1B1 145 aa15□□□□□ -0.01
LIME1-206ENST00000487026 C2orf82Q6UX34 121 aa15□□□□□ -0.01
LIME1-206ENST00000487026 FAM19A5Q7Z5A7 132 aaPredicted RBP15□□□□□ -0.01
LIME1-206ENST00000487026 TEX43Q6ZNM6 134 aa14.99□□□□□ -0.01
LIME1-206ENST00000487026 LAMTOR2Q9Y2Q5 125 aa14.99□□□□□ -0.01
LIME1-206ENST00000487026 CARHSP1Q9Y2V2 147 aaKnown RBP14.99□□□□□ -0.01
LIME1-206ENST00000487026 UBE2D1P51668 147 aa14.98□□□□□ -0.01
LIME1-206ENST00000487026 C2orf66Q6UXQ4 117 aa14.98□□□□□ -0.01
LIME1-206ENST00000487026 Q8N8P6 123 aa14.98□□□□□ -0.01
LIME1-206ENST00000487026 KRTAP7-1Q8IUC3 87 aa14.97□□□□□ -0.01
LIME1-206ENST00000487026 CYSLTR1Q9Y271 337 aa14.97□□□□□ -0.01
LIME1-206ENST00000487026 IGLV7-43P04211 117 aa14.96□□□□□ -0.01
LIME1-206ENST00000487026 CTDSP1Q9GZU7 261 aa14.96□□□□□ -0.01
LIME1-206ENST00000487026 LINC00173Q6ZV60 143 aa14.95□□□□□ -0.02
LIME1-206ENST00000487026 SLC7A5P1Q8MH63 180 aa14.94□□□□□ -0.02
LIME1-206ENST00000487026 SVBPQ8N300 66 aa14.94□□□□□ -0.02
LIME1-206ENST00000487026 C2orf88Q9BSF0 95 aa14.94□□□□□ -0.02
LIME1-206ENST00000487026 VCX2Q9H322 139 aa14.94□□□□□ -0.02
LIME1-206ENST00000487026 TRBV30A0A0K0K1B3 111 aa14.93□□□□□ -0.02
LIME1-206ENST00000487026 APOC3P02656 99 aa14.93□□□□□ -0.02
LIME1-206ENST00000487026 RHEBQ15382 184 aa14.93□□□□□ -0.02
LIME1-206ENST00000487026 Q6ZN92 141 aa14.93□□□□□ -0.02
LIME1-206ENST00000487026 AMELXQ99217 191 aa14.93□□□□□ -0.02
LIME1-206ENST00000487026 RNF213Q63HN8 5207 aa14.93□□□□□ -0.02
LIME1-206ENST00000487026 SNAPINO95295 136 aa14.92□□□□□ -0.02
LIME1-206ENST00000487026 ORMDL2Q53FV1 153 aa14.92□□□□□ -0.02
LIME1-206ENST00000487026 PACRGQ96M98 296 aaPredicted RBP14.92□□□□□ -0.02
LIME1-206ENST00000487026 LINC01561Q8N1V8 128 aa14.91□□□□□ -0.02
LIME1-206ENST00000487026 DIRC1Q969H9 104 aa14.91□□□□□ -0.02
LIME1-206ENST00000487026 IGIPA6NJ69 53 aa14.9□□□□□ -0.02
LIME1-206ENST00000487026 NDUFC2-KCTD14E9PQ53 114 aa14.9□□□□□ -0.02
LIME1-206ENST00000487026 M0QXV9 152 aa14.9□□□□□ -0.02
LIME1-206ENST00000487026 C9orf129Q5T035 196 aaKnown RBP14.9□□□□□ -0.02
LIME1-206ENST00000487026 TOMM7Q9P0U1 55 aa14.9□□□□□ -0.02
LIME1-206ENST00000487026 PRR26Q8N8Z3 221 aa14.89□□□□□ -0.03
LIME1-206ENST00000487026 UBE2BP63146 152 aa14.88□□□□□ -0.03
LIME1-206ENST00000487026 RPS10P5Q9NQ39 176 aa14.88□□□□□ -0.03
LIME1-206ENST00000487026 PRSS2P07478 247 aa14.87□□□□□ -0.03
LIME1-206ENST00000487026 S100PP25815 95 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms