RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RASL11AQ6T310 242 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 C15orf56Q8N910 161 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 FER1L6-AS1Q8NA97 138 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 SFT2D1Q8WV19 159 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 NIT2Q9NQR4 276 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 LINC00474Q9P2X8 69 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 PKIGQ9Y2B9 76 aa2.43□□□□□ -2.02
SNRNP40-205ENST00000486941 GVQW2A0A096LPI5 108 aaPredicted RBP2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 IGKV2-24A0A0C4DH68 120 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 XKRY2A2RUG3 117 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 LINC00587B1AMM8 73 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 G3V3Q6 166 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 TRGC1P0CF51 173 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 VPREB1P12018 145 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 RPL35P42766 123 aaKnown RBP2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 COTL1Q14019 142 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 C9orf62Q8N4C0 152 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 KCNRGQ8N5I3 272 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 OR2D3Q8NGH3 330 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 LYPD6BQ8NI32 183 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 CHCHD10Q8WYQ3 142 aaPredicted RBP2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 SMIM12Q96EX1 92 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 TPPP3Q9BW30 176 aa2.42□□□□□ -2.02
SNRNP40-205ENST00000486941 A0A096LNI7 61 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 IGKV3OR2-268A0A0C4DH90 116 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 C19orf71A6NCJ1 209 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 F8W036 122 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 ARPC5O15511 151 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 SCO1O75880 301 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 NCR2O95944 276 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 IFNA1P01562 189 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 NTF3P20783 257 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 CCL20P78556 96 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 ZNF345Q14585 488 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 CLLU1Q5K131 121 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 AMMECR1LQ6DCA0 310 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 LYZL1Q6UWQ5 148 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 FAM213BQ8TBF2 198 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 C11orf52Q96A22 123 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 BIN3Q9NQY0 253 aa2.41□□□□□ -2.02
SNRNP40-205ENST00000486941 TRAV1-1A0A0B4J248 108 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 IGHV1-58A0A0C4DH39 117 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 A0A1B0GV50 99 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 FGF6P10767 208 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 ZNF25P17030 456 aaPredicted RBP2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 CTRLP40313 264 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 GNG4P50150 75 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 EIF5AP63241 154 aaKnown RBP2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 CENPWQ5EE01 88 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 RNASEKQ6P5S7 137 aaKnown RBP2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 TEX261Q6UWH6 196 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 GATD1Q8NB37 220 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 OR5A1Q8NGJ0 315 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 CNFNQ9BYD5 112 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 MANBALQ9NQG1 85 aa2.4□□□□□ -2.03
SNRNP40-205ENST00000486941 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 TRAV26-2A0A0B4J265 109 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 LOC107984640A0A0U1RRK4 108 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 LINC00959A0A1B0GUT2 108 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 IGKV2-29A2NJV5 120 aaPredicted RBP2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 RAB19A4D1S5 217 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 FAM231BA6NCW3 169 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 SDHAF1A6NFY7 115 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 HMSDA8MTL9 139 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 I3L3M4 83 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 CCL25O15444 150 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 PDE6DO43924 150 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 APCSP02743 223 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 ESDP10768 282 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 XCL1P47992 114 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 MEF2BQ02080 365 aaPredicted RBP2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 SYCNQ0VAF6 134 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 SS18Q15532 418 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 CD164L2Q6UWJ8 174 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 ZNF664Q8N3J9 261 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 ISOC2Q96AB3 205 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 RPL39LQ96EH5 51 aaKnown RBP2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 TMEM101Q96IK0 257 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 BTF3L4Q96K17 158 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 CARD19Q96LW7 228 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 C12orf57Q99622 126 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 GNG13Q9P2W3 67 aa2.39□□□□□ -2.03
SNRNP40-205ENST00000486941 TRBV20OR9-2A0A075B6H5 130 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 IGLV4-69A0A075B6H9 119 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 TRBV6-5A0A0K0K1A5 114 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 A0A1W2PNN7 141 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 KANTRA0A1W2PQU2 76 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 C1orf196B1AJZ1 125 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 SMLR1H3BR10 107 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 TEX46H3BTG2 121 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 PMCHP20382 165 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 EIF5AL1Q6IS14 154 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 SMIM15Q7Z3B0 74 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 MRPL52Q86TS9 123 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 LINC00526Q96FQ7 95 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 RPP21Q9H633 154 aaKnown RBP2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 CDC42SE2Q9NRR3 84 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 PSORS1C2Q9UIG4 136 aa2.38□□□□□ -2.03
SNRNP40-205ENST00000486941 TRBV27A0A0K0K1C4 114 aa2.37□□□□□ -2.03
SNRNP40-205ENST00000486941 APOMO95445 188 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms