RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
COL6A1-204ENST00000486023 MRPS36P82909 103 aaKnown RBP11.15□□□□□ -0.62
COL6A1-204ENST00000486023 SPAG11BQ08648 103 aa11.14□□□□□ -0.63
COL6A1-204ENST00000486023 KIAA1644Q3SXP7 199 aa11.14□□□□□ -0.63
COL6A1-204ENST00000486023 COMMD7Q86VX2 200 aa11.14□□□□□ -0.63
COL6A1-204ENST00000486023 Q8N8P6 123 aa11.14□□□□□ -0.63
COL6A1-204ENST00000486023 ORAOV1Q8WV07 137 aa11.14□□□□□ -0.63
COL6A1-204ENST00000486023 LAMTOR2Q9Y2Q5 125 aa11.14□□□□□ -0.63
COL6A1-204ENST00000486023 A0A0J9YXV3 536 aa11.13□□□□□ -0.63
COL6A1-204ENST00000486023 LINC00474Q9P2X8 69 aa11.13□□□□□ -0.63
COL6A1-204ENST00000486023 PKIGQ9Y2B9 76 aa11.13□□□□□ -0.63
COL6A1-204ENST00000486023 IGLV4-3A0A075B6K6 122 aa11.12□□□□□ -0.63
COL6A1-204ENST00000486023 ZC2HC1BQ5TFG8 222 aa11.12□□□□□ -0.63
COL6A1-204ENST00000486023 IMMP2LQ96T52 175 aa11.12□□□□□ -0.63
COL6A1-204ENST00000486023 FAT3Q8TDW7 4589 aa11.12□□□□□ -0.63
COL6A1-204ENST00000486023 LOC107984640A0A0U1RRK4 108 aa11.11□□□□□ -0.63
COL6A1-204ENST00000486023 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
COL6A1-204ENST00000486023 RPL18AQ02543 176 aaKnown RBP11.11□□□□□ -0.63
COL6A1-204ENST00000486023 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
COL6A1-204ENST00000486023 CYSLTR1Q9Y271 337 aa11.11□□□□□ -0.63
COL6A1-204ENST00000486023 TGIF2-C20orf24A0A0A6YYL0 155 aa11.1□□□□□ -0.63
COL6A1-204ENST00000486023 IGHV3OR16-9A0A0B4J2B5 98 aa11.1□□□□□ -0.63
COL6A1-204ENST00000486023 S100PP25815 95 aa11.1□□□□□ -0.63
COL6A1-204ENST00000486023 ORMDL2Q53FV1 153 aa11.1□□□□□ -0.63
COL6A1-204ENST00000486023 C2orf66Q6UXQ4 117 aa11.1□□□□□ -0.63
COL6A1-204ENST00000486023 TEX43Q6ZNM6 134 aa11.1□□□□□ -0.63
COL6A1-204ENST00000486023 C2orf48Q96LS8 159 aa11.1□□□□□ -0.63
COL6A1-204ENST00000486023 SEC11CQ9BY50 192 aa11.1□□□□□ -0.63
COL6A1-204ENST00000486023 PYGO1Q9Y3Y4 419 aa11.1□□□□□ -0.63
COL6A1-204ENST00000486023 PKHD1L1Q86WI1 4243 aa11.1□□□□□ -0.63
COL6A1-204ENST00000486023 OXTP01178 125 aa11.09□□□□□ -0.63
COL6A1-204ENST00000486023 PTTG1IPP53801 180 aa11.09□□□□□ -0.63
COL6A1-204ENST00000486023 Q6ZN92 141 aa11.09□□□□□ -0.63
COL6A1-204ENST00000486023 OR10D4PQ8NGN7 298 aa11.09□□□□□ -0.63
COL6A1-204ENST00000486023 VCX2Q9H322 139 aa11.09□□□□□ -0.63
COL6A1-204ENST00000486023 LINC00242Q5T6M2 205 aa11.08□□□□□ -0.64
COL6A1-204ENST00000486023 C2orf88Q9BSF0 95 aa11.08□□□□□ -0.64
COL6A1-204ENST00000486023 NXT2Q9NPJ8 142 aaKnown RBP11.07□□□□□ -0.64
COL6A1-204ENST00000486023 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
COL6A1-204ENST00000486023 RPS10P5Q9NQ39 176 aa11.06□□□□□ -0.64
COL6A1-204ENST00000486023 A0A1W2PNN7 141 aa11.05□□□□□ -0.64
COL6A1-204ENST00000486023 NDUFA1O15239 70 aa11.05□□□□□ -0.64
COL6A1-204ENST00000486023 UBE2D1P51668 147 aa11.05□□□□□ -0.64
COL6A1-204ENST00000486023 C10orf25Q5T742 122 aa11.05□□□□□ -0.64
COL6A1-204ENST00000486023 UNQ6190/PRO20217Q6UXQ8 127 aa11.05□□□□□ -0.64
COL6A1-204ENST00000486023 TRAV9-1A0A075B6T8 112 aa11.04□□□□□ -0.64
COL6A1-204ENST00000486023 A0A087WZ39 114 aa11.03□□□□□ -0.64
COL6A1-204ENST00000486023 K7EMI3 77 aa11.03□□□□□ -0.64
COL6A1-204ENST00000486023 PRR3P79522 188 aaKnown RBP11.03□□□□□ -0.64
COL6A1-204ENST00000486023 C9orf116Q5BN46 136 aaPredicted RBP11.03□□□□□ -0.64
COL6A1-204ENST00000486023 IGIPA6NJ69 53 aa11.02□□□□□ -0.65
COL6A1-204ENST00000486023 FABP9Q0Z7S8 132 aa11.02□□□□□ -0.65
COL6A1-204ENST00000486023 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
COL6A1-204ENST00000486023 LINC00173Q6ZV60 143 aa11.02□□□□□ -0.65
COL6A1-204ENST00000486023 GNB1LQ9BYB4 327 aa11.02□□□□□ -0.65
COL6A1-204ENST00000486023 MRPL35Q9NZE8 188 aaKnown RBP11.02□□□□□ -0.65
COL6A1-204ENST00000486023 TOMM7Q9P0U1 55 aa11.02□□□□□ -0.65
COL6A1-204ENST00000486023 G0S2P27469 103 aa11.01□□□□□ -0.65
COL6A1-204ENST00000486023 GAGE2EQ4V326 116 aa11.01□□□□□ -0.65
COL6A1-204ENST00000486023 C2orf82Q6UX34 121 aa11.01□□□□□ -0.65
COL6A1-204ENST00000486023 SCGB3A1Q96QR1 104 aa11.01□□□□□ -0.65
COL6A1-204ENST00000486023 AMELXQ99217 191 aa11.01□□□□□ -0.65
COL6A1-204ENST00000486023 C6orf48Q9UBA6 75 aa11.01□□□□□ -0.65
COL6A1-204ENST00000486023 GAGE2DQ9UEU5 116 aa11.01□□□□□ -0.65
COL6A1-204ENST00000486023 ALKBH7Q9BT30 221 aaPredicted RBP11□□□□□ -0.65
COL6A1-204ENST00000486023 MRPL18Q9H0U6 180 aaKnown RBP11□□□□□ -0.65
COL6A1-204ENST00000486023 F8WDY8 70 aa10.99□□□□□ -0.65
COL6A1-204ENST00000486023 PRSS2P07478 247 aa10.99□□□□□ -0.65
COL6A1-204ENST00000486023 KIAA0087Q14695 138 aa10.99□□□□□ -0.65
COL6A1-204ENST00000486023 PAPPA-AS1Q5QFB9 102 aa10.99□□□□□ -0.65
COL6A1-204ENST00000486023 Q6ZRP5 223 aa10.99□□□□□ -0.65
COL6A1-204ENST00000486023 PHF5AQ7RTV0 110 aaKnown RBP10.99□□□□□ -0.65
COL6A1-204ENST00000486023 TOMM6Q96B49 74 aa10.99□□□□□ -0.65
COL6A1-204ENST00000486023 RHEBQ15382 184 aa10.98□□□□□ -0.65
COL6A1-204ENST00000486023 C10orf91Q5T1B1 145 aa10.98□□□□□ -0.65
COL6A1-204ENST00000486023 PACRGQ96M98 296 aaPredicted RBP10.98□□□□□ -0.65
COL6A1-204ENST00000486023 GEMIN7Q9H840 131 aaKnown RBP10.98□□□□□ -0.65
COL6A1-204ENST00000486023 CARHSP1Q9Y2V2 147 aaKnown RBP10.98□□□□□ -0.65
COL6A1-204ENST00000486023 FAM168BA1KXE4 195 aa10.97□□□□□ -0.65
COL6A1-204ENST00000486023 APOC3P02656 99 aa10.97□□□□□ -0.65
COL6A1-204ENST00000486023 COX19Q49B96 90 aa10.97□□□□□ -0.65
COL6A1-204ENST00000486023 C6orf226Q5I0X4 101 aa10.97□□□□□ -0.65
COL6A1-204ENST00000486023 FA2HQ7L5A8 372 aa10.97□□□□□ -0.65
COL6A1-204ENST00000486023 SMCO4Q9NRQ5 59 aa10.97□□□□□ -0.65
COL6A1-204ENST00000486023 NPSP0C0P6 89 aa10.96□□□□□ -0.65
COL6A1-204ENST00000486023 CKS1BP61024 79 aa10.96□□□□□ -0.65
COL6A1-204ENST00000486023 ERASQ7Z444 233 aa10.96□□□□□ -0.65
COL6A1-204ENST00000486023 TIMM17AQ99595 171 aa10.96□□□□□ -0.65
COL6A1-204ENST00000486023 CDKN2A-AS1Q9UH64 79 aa10.96□□□□□ -0.65
COL6A1-204ENST00000486023 MT-ND6P03923 174 aa10.95□□□□□ -0.66
COL6A1-204ENST00000486023 HERVK_113P63121 156 aa10.95□□□□□ -0.66
COL6A1-204ENST00000486023 SERTAD4-AS1Q5TG53 156 aa10.95□□□□□ -0.66
COL6A1-204ENST00000486023 FAM19A5Q7Z5A7 132 aaPredicted RBP10.95□□□□□ -0.66
COL6A1-204ENST00000486023 SEC11AP67812 179 aa10.94□□□□□ -0.66
COL6A1-204ENST00000486023 LINC01561Q8N1V8 128 aa10.94□□□□□ -0.66
COL6A1-204ENST00000486023 TRAPPC1Q9Y5R8 145 aa10.94□□□□□ -0.66
COL6A1-204ENST00000486023 LINC00469Q8N7U9 141 aa10.93□□□□□ -0.66
COL6A1-204ENST00000486023 PSORS1C2Q9UIG4 136 aa10.93□□□□□ -0.66
COL6A1-204ENST00000486023 TRBV30A0A0K0K1B3 111 aa10.92□□□□□ -0.66
COL6A1-204ENST00000486023 TLX1NBP0CAT3 122 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms