RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 IGKV3OR2-268A0A0C4DH90 116 aa4.46□□□□□ -1.7
VPS50-218ENST00000485994 D6R8Y8 96 aa4.46□□□□□ -1.7
VPS50-218ENST00000485994 MRPS36P82909 103 aaKnown RBP4.46□□□□□ -1.7
VPS50-218ENST00000485994 TMEM136Q6ZRR5 245 aa4.46□□□□□ -1.7
VPS50-218ENST00000485994 ORMDL3Q8N138 153 aa4.46□□□□□ -1.7
VPS50-218ENST00000485994 FAM104AQ969W3 186 aa4.46□□□□□ -1.7
VPS50-218ENST00000485994 SMIM2Q9BVW6 85 aa4.46□□□□□ -1.7
VPS50-218ENST00000485994 PLAC8Q9NZF1 115 aa4.46□□□□□ -1.7
VPS50-218ENST00000485994 PKIGQ9Y2B9 76 aa4.46□□□□□ -1.7
VPS50-218ENST00000485994 PYGO1Q9Y3Y4 419 aa4.46□□□□□ -1.7
VPS50-218ENST00000485994 FAT3Q8TDW7 4589 aa4.45□□□□□ -1.7
VPS50-218ENST00000485994 F8WDY8 70 aa4.45□□□□□ -1.7
VPS50-218ENST00000485994 PANO1I0J062 215 aa4.45□□□□□ -1.7
VPS50-218ENST00000485994 K7EMI3 77 aa4.45□□□□□ -1.7
VPS50-218ENST00000485994 OXTP01178 125 aa4.45□□□□□ -1.7
VPS50-218ENST00000485994 XCL1P47992 114 aa4.45□□□□□ -1.7
VPS50-218ENST00000485994 MRPL54Q6P161 138 aaKnown RBP4.45□□□□□ -1.7
VPS50-218ENST00000485994 SPACA4Q8TDM5 124 aa4.45□□□□□ -1.7
VPS50-218ENST00000485994 CTDSP1Q9GZU7 261 aa4.45□□□□□ -1.7
VPS50-218ENST00000485994 SPANXA1Q9NS26 97 aa4.45□□□□□ -1.7
VPS50-218ENST00000485994 LINC00474Q9P2X8 69 aa4.45□□□□□ -1.7
VPS50-218ENST00000485994 LRP1Q07954 4544 aaKnown RBP4.45□□□□□ -1.7
VPS50-218ENST00000485994 A0A087WYN8 130 aa4.44□□□□□ -1.7
VPS50-218ENST00000485994 NPYP01303 97 aa4.44□□□□□ -1.7
VPS50-218ENST00000485994 NPSP0C0P6 89 aa4.44□□□□□ -1.7
VPS50-218ENST00000485994 COX6A2Q02221 97 aa4.44□□□□□ -1.7
VPS50-218ENST00000485994 RNF151Q2KHN1 245 aa4.44□□□□□ -1.7
VPS50-218ENST00000485994 PRSS3P2Q8NHM4 247 aa4.44□□□□□ -1.7
VPS50-218ENST00000485994 C2orf48Q96LS8 159 aa4.44□□□□□ -1.7
VPS50-218ENST00000485994 PRELID3AQ96N28 172 aa4.44□□□□□ -1.7
VPS50-218ENST00000485994 YPEL4Q96NS1 127 aa4.44□□□□□ -1.7
VPS50-218ENST00000485994 TRAV9-1A0A075B6T8 112 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 IGHV3OR16-9A0A0B4J2B5 98 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 ZNF561-AS1K7EIQ3 104 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 COX7A2LO14548 114 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 APOMO95445 188 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 APOC3P02656 99 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 RAB5AP20339 215 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 RPL37AP61513 92 aaKnown RBP4.43□□□□□ -1.7
VPS50-218ENST00000485994 RPL39P62891 51 aaKnown RBP4.43□□□□□ -1.7
VPS50-218ENST00000485994 SYCNQ0VAF6 134 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 RHEBQ15382 184 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 HIGD2BQ4VC39 106 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 DPH3Q96FX2 82 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 RPS10P5Q9NQ39 176 aa4.43□□□□□ -1.7
VPS50-218ENST00000485994 IGLV4-69A0A075B6H9 119 aa4.42□□□□□ -1.7
VPS50-218ENST00000485994 TRAV13-1A0A0B4J241 112 aa4.42□□□□□ -1.7
VPS50-218ENST00000485994 MALP21145 153 aa4.42□□□□□ -1.7
VPS50-218ENST00000485994 G0S2P27469 103 aa4.42□□□□□ -1.7
VPS50-218ENST00000485994 NDUFA5Q16718 116 aa4.42□□□□□ -1.7
VPS50-218ENST00000485994 Q6ZRU5 148 aa4.42□□□□□ -1.7
VPS50-218ENST00000485994 LINC01561Q8N1V8 128 aa4.42□□□□□ -1.7
VPS50-218ENST00000485994 SVBPQ8N300 66 aa4.42□□□□□ -1.7
VPS50-218ENST00000485994 Q8N8P6 123 aa4.42□□□□□ -1.7
VPS50-218ENST00000485994 OR10D4PQ8NGN7 298 aa4.42□□□□□ -1.7
VPS50-218ENST00000485994 SNAPINO95295 136 aa4.41□□□□□ -1.7
VPS50-218ENST00000485994 CHTF8P0CG12 524 aa4.41□□□□□ -1.7
VPS50-218ENST00000485994 IFI27P40305 119 aaPredicted RBP4.41□□□□□ -1.7
VPS50-218ENST00000485994 COX19Q49B96 90 aa4.41□□□□□ -1.7
VPS50-218ENST00000485994 ORMDL2Q53FV1 153 aa4.41□□□□□ -1.7
VPS50-218ENST00000485994 Q6ZUT4 128 aa4.41□□□□□ -1.7
VPS50-218ENST00000485994 FAM19A3Q7Z5A8 133 aa4.41□□□□□ -1.7
VPS50-218ENST00000485994 CARD19Q96LW7 228 aa4.41□□□□□ -1.7
VPS50-218ENST00000485994 MAP1LC3AQ9H492 121 aa4.41□□□□□ -1.7
VPS50-218ENST00000485994 NXT2Q9NPJ8 142 aaKnown RBP4.41□□□□□ -1.7
VPS50-218ENST00000485994 A0A087WZ39 114 aa4.4□□□□□ -1.71
VPS50-218ENST00000485994 A0A096LNI7 61 aa4.4□□□□□ -1.71
VPS50-218ENST00000485994 TGIF2-C20orf24A0A0A6YYL0 155 aa4.4□□□□□ -1.71
VPS50-218ENST00000485994 LOC107984640A0A0U1RRK4 108 aa4.4□□□□□ -1.71
VPS50-218ENST00000485994 LINC01549A6NIU2 74 aa4.4□□□□□ -1.71
VPS50-218ENST00000485994 MAJINQ3KP22 176 aa4.4□□□□□ -1.71
VPS50-218ENST00000485994 C5orf38Q86SI9 138 aa4.4□□□□□ -1.71
VPS50-218ENST00000485994 STPG4Q8N801 248 aa4.4□□□□□ -1.71
VPS50-218ENST00000485994 TMEM141Q96I45 108 aa4.4□□□□□ -1.71
VPS50-218ENST00000485994 AMELXQ99217 191 aa4.4□□□□□ -1.71
VPS50-218ENST00000485994 OPRPNQ99935 248 aaPredicted RBP4.4□□□□□ -1.71
VPS50-218ENST00000485994 GNB1LQ9BYB4 327 aa4.4□□□□□ -1.71
VPS50-218ENST00000485994 MRPL35Q9NZE8 188 aaKnown RBP4.4□□□□□ -1.71
VPS50-218ENST00000485994 IGLV4-3A0A075B6K6 122 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 LINC01546A6NGU7 62 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 IGIPA6NJ69 53 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 TLX1NBP0CAT3 122 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 PTTG1IPP53801 180 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 RNASE13Q5GAN3 156 aaKnown RBP4.39□□□□□ -1.71
VPS50-218ENST00000485994 PAPPA-AS1Q5QFB9 102 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 LINC00242Q5T6M2 205 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 SERTAD4-AS1Q5TG53 156 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 C2orf66Q6UXQ4 117 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 C7orf33Q8WU49 177 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 CAMK2N2Q96S95 79 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 CYSLTR1Q9Y271 337 aa4.39□□□□□ -1.71
VPS50-218ENST00000485994 LOC389332A0A1B0GUA5 103 aa4.38□□□□□ -1.71
VPS50-218ENST00000485994 IFITM10A6NMD0 228 aa4.38□□□□□ -1.71
VPS50-218ENST00000485994 S100PP25815 95 aa4.38□□□□□ -1.71
VPS50-218ENST00000485994 UBE2D1P51668 147 aa4.38□□□□□ -1.71
VPS50-218ENST00000485994 HNRNPA3P51991 378 aaKnown RBP4.38□□□□□ -1.71
VPS50-218ENST00000485994 SEC11AP67812 179 aa4.38□□□□□ -1.71
VPS50-218ENST00000485994 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
VPS50-218ENST00000485994 ODF1Q14990 250 aa4.38□□□□□ -1.71
VPS50-218ENST00000485994 KIAA1644Q3SXP7 199 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms