RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 VCYO14598 125 aa8.45□□□□□ -1.06
SMARCD3-211ENST00000485592 MT-ND6P03923 174 aa8.45□□□□□ -1.06
SMARCD3-211ENST00000485592 MALP21145 153 aa8.45□□□□□ -1.06
SMARCD3-211ENST00000485592 CDC42SE2Q9NRR3 84 aa8.45□□□□□ -1.06
SMARCD3-211ENST00000485592 IGLV4-69A0A075B6H9 119 aa8.44□□□□□ -1.06
SMARCD3-211ENST00000485592 APOC3P02656 99 aa8.44□□□□□ -1.06
SMARCD3-211ENST00000485592 MRPL52Q86TS9 123 aaKnown RBP8.44□□□□□ -1.06
SMARCD3-211ENST00000485592 ZNF664Q8N3J9 261 aa8.44□□□□□ -1.06
SMARCD3-211ENST00000485592 PRELID3AQ96N28 172 aa8.44□□□□□ -1.06
SMARCD3-211ENST00000485592 CAMK2N2Q96S95 79 aa8.44□□□□□ -1.06
SMARCD3-211ENST00000485592 RPS10P5Q9NQ39 176 aa8.44□□□□□ -1.06
SMARCD3-211ENST00000485592 A0A1W2PNN7 141 aa8.43□□□□□ -1.06
SMARCD3-211ENST00000485592 APOMO95445 188 aa8.43□□□□□ -1.06
SMARCD3-211ENST00000485592 PSORS1C2Q9UIG4 136 aa8.43□□□□□ -1.06
SMARCD3-211ENST00000485592 PRSS47A8MTI9 375 aa8.42□□□□□ -1.06
SMARCD3-211ENST00000485592 C1orf196B1AJZ1 125 aa8.42□□□□□ -1.06
SMARCD3-211ENST00000485592 COX7A2LO14548 114 aa8.42□□□□□ -1.06
SMARCD3-211ENST00000485592 RPL18AQ02543 176 aaKnown RBP8.42□□□□□ -1.06
SMARCD3-211ENST00000485592 C9orf116Q5BN46 136 aaPredicted RBP8.42□□□□□ -1.06
SMARCD3-211ENST00000485592 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
SMARCD3-211ENST00000485592 SVBPQ8N300 66 aa8.42□□□□□ -1.06
SMARCD3-211ENST00000485592 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
SMARCD3-211ENST00000485592 KIR2DL4Q99706 377 aa8.42□□□□□ -1.06
SMARCD3-211ENST00000485592 LAMTOR2Q9Y2Q5 125 aa8.42□□□□□ -1.06
SMARCD3-211ENST00000485592 UBE2D4Q9Y2X8 147 aa8.42□□□□□ -1.06
SMARCD3-211ENST00000485592 FCER1GP30273 86 aa8.41□□□□□ -1.06
SMARCD3-211ENST00000485592 SMAGPQ0VAQ4 97 aa8.41□□□□□ -1.06
SMARCD3-211ENST00000485592 SLC7A5P1Q8MH63 180 aa8.41□□□□□ -1.06
SMARCD3-211ENST00000485592 TCAPO15273 167 aa8.4□□□□□ -1.06
SMARCD3-211ENST00000485592 SNAPINO95295 136 aa8.4□□□□□ -1.06
SMARCD3-211ENST00000485592 S100PP25815 95 aa8.4□□□□□ -1.06
SMARCD3-211ENST00000485592 RPL39P62891 51 aaKnown RBP8.4□□□□□ -1.06
SMARCD3-211ENST00000485592 C2orf48Q96LS8 159 aa8.4□□□□□ -1.06
SMARCD3-211ENST00000485592 YPEL4Q96NS1 127 aa8.4□□□□□ -1.06
SMARCD3-211ENST00000485592 TGIF2-C20orf24A0A0A6YYL0 155 aa8.39□□□□□ -1.07
SMARCD3-211ENST00000485592 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.39□□□□□ -1.07
SMARCD3-211ENST00000485592 NDUFA5Q16718 116 aa8.39□□□□□ -1.07
SMARCD3-211ENST00000485592 KIAA1644Q3SXP7 199 aa8.39□□□□□ -1.07
SMARCD3-211ENST00000485592 PHF5AQ7RTV0 110 aaKnown RBP8.39□□□□□ -1.07
SMARCD3-211ENST00000485592 DIRC1Q969H9 104 aa8.39□□□□□ -1.07
SMARCD3-211ENST00000485592 GNB1LQ9BYB4 327 aa8.39□□□□□ -1.07
SMARCD3-211ENST00000485592 CSDC2Q9Y534 153 aaKnown RBP8.39□□□□□ -1.07
SMARCD3-211ENST00000485592 Q6ZUT4 128 aa8.38□□□□□ -1.07
SMARCD3-211ENST00000485592 TIMM21Q9BVV7 248 aa8.38□□□□□ -1.07
SMARCD3-211ENST00000485592 MAP1LC3AQ9H492 121 aa8.38□□□□□ -1.07
SMARCD3-211ENST00000485592 LPAP08519 4548 aa8.37□□□□□ -1.07
SMARCD3-211ENST00000485592 TRAV13-1A0A0B4J241 112 aa8.37□□□□□ -1.07
SMARCD3-211ENST00000485592 LOC389332A0A1B0GUA5 103 aa8.37□□□□□ -1.07
SMARCD3-211ENST00000485592 SPAG11BQ08648 103 aa8.37□□□□□ -1.07
SMARCD3-211ENST00000485592 RNASE13Q5GAN3 156 aaKnown RBP8.37□□□□□ -1.07
SMARCD3-211ENST00000485592 Q8N8P6 123 aa8.37□□□□□ -1.07
SMARCD3-211ENST00000485592 PRR26Q8N8Z3 221 aa8.37□□□□□ -1.07
SMARCD3-211ENST00000485592 IGLV7-43P04211 117 aa8.36□□□□□ -1.07
SMARCD3-211ENST00000485592 RNF151Q2KHN1 245 aa8.36□□□□□ -1.07
SMARCD3-211ENST00000485592 C5orf38Q86SI9 138 aa8.36□□□□□ -1.07
SMARCD3-211ENST00000485592 OPRPNQ99935 248 aaPredicted RBP8.36□□□□□ -1.07
SMARCD3-211ENST00000485592 ALKBH7Q9BT30 221 aaPredicted RBP8.36□□□□□ -1.07
SMARCD3-211ENST00000485592 IFI27P40305 119 aaPredicted RBP8.35□□□□□ -1.07
SMARCD3-211ENST00000485592 OR10D4PQ8NGN7 298 aa8.35□□□□□ -1.07
SMARCD3-211ENST00000485592 TMEM18Q96B42 140 aa8.35□□□□□ -1.07
SMARCD3-211ENST00000485592 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
SMARCD3-211ENST00000485592 A0A087WZ39 114 aa8.34□□□□□ -1.07
SMARCD3-211ENST00000485592 H0Y9J4 135 aa8.34□□□□□ -1.07
SMARCD3-211ENST00000485592 COX19Q49B96 90 aa8.34□□□□□ -1.07
SMARCD3-211ENST00000485592 CBLN2Q8IUK8 224 aa8.34□□□□□ -1.07
SMARCD3-211ENST00000485592 SPANXA1Q9NS26 97 aa8.34□□□□□ -1.07
SMARCD3-211ENST00000485592 IGLV1-50A0A075B6I6 118 aa8.33□□□□□ -1.08
SMARCD3-211ENST00000485592 LINC01546A6NGU7 62 aa8.33□□□□□ -1.08
SMARCD3-211ENST00000485592 F8WDY8 70 aa8.33□□□□□ -1.08
SMARCD3-211ENST00000485592 RAB5AP20339 215 aa8.33□□□□□ -1.08
SMARCD3-211ENST00000485592 MRPS36P82909 103 aaKnown RBP8.33□□□□□ -1.08
SMARCD3-211ENST00000485592 NXT2Q9NPJ8 142 aaKnown RBP8.33□□□□□ -1.08
SMARCD3-211ENST00000485592 MRPL35Q9NZE8 188 aaKnown RBP8.33□□□□□ -1.08
SMARCD3-211ENST00000485592 NDUFA1O15239 70 aa8.32□□□□□ -1.08
SMARCD3-211ENST00000485592 ORAOV1Q8WV07 137 aa8.32□□□□□ -1.08
SMARCD3-211ENST00000485592 IGLV4-3A0A075B6K6 122 aa8.31□□□□□ -1.08
SMARCD3-211ENST00000485592 K7EMI3 77 aa8.31□□□□□ -1.08
SMARCD3-211ENST00000485592 UBE2D1P51668 147 aa8.31□□□□□ -1.08
SMARCD3-211ENST00000485592 FABP9Q0Z7S8 132 aa8.31□□□□□ -1.08
SMARCD3-211ENST00000485592 C2orf66Q6UXQ4 117 aa8.31□□□□□ -1.08
SMARCD3-211ENST00000485592 LINC00173Q6ZV60 143 aa8.31□□□□□ -1.08
SMARCD3-211ENST00000485592 PYGO1Q9Y3Y4 419 aa8.31□□□□□ -1.08
SMARCD3-211ENST00000485592 PRR4Q16378 134 aa8.3□□□□□ -1.08
SMARCD3-211ENST00000485592 ORMDL2Q53FV1 153 aa8.3□□□□□ -1.08
SMARCD3-211ENST00000485592 FAM19A5Q7Z5A7 132 aaPredicted RBP8.3□□□□□ -1.08
SMARCD3-211ENST00000485592 URB1-AS1Q96HZ7 61 aa8.3□□□□□ -1.08
SMARCD3-211ENST00000485592 CYSLTR1Q9Y271 337 aa8.3□□□□□ -1.08
SMARCD3-211ENST00000485592 TRAPPC1Q9Y5R8 145 aa8.3□□□□□ -1.08
SMARCD3-211ENST00000485592 A0A0U1RQV1 116 aa8.29□□□□□ -1.08
SMARCD3-211ENST00000485592 FAM168BA1KXE4 195 aa8.29□□□□□ -1.08
SMARCD3-211ENST00000485592 IGIPA6NJ69 53 aa8.29□□□□□ -1.08
SMARCD3-211ENST00000485592 TLX1NBP0CAT3 122 aa8.29□□□□□ -1.08
SMARCD3-211ENST00000485592 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
SMARCD3-211ENST00000485592 UBE2BP63146 152 aa8.29□□□□□ -1.08
SMARCD3-211ENST00000485592 C18orf32Q8TCD1 76 aa8.29□□□□□ -1.08
SMARCD3-211ENST00000485592 ZC2HC1BQ5TFG8 222 aa8.28□□□□□ -1.08
SMARCD3-211ENST00000485592 SMCO4Q9NRQ5 59 aa8.28□□□□□ -1.08
SMARCD3-211ENST00000485592 A0A096LNJ9 63 aa8.27□□□□□ -1.09
SMARCD3-211ENST00000485592 M0QXV9 152 aa8.27□□□□□ -1.09
SMARCD3-211ENST00000485592 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms