RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CSDC2Q9Y534 153 aaKnown RBP6.34□□□□□ -1.39
SMARCC1-205ENST00000483847 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
SMARCC1-205ENST00000483847 C9orf129Q5T035 196 aaKnown RBP6.33□□□□□ -1.4
SMARCC1-205ENST00000483847 BIN3Q9NQY0 253 aa6.33□□□□□ -1.4
SMARCC1-205ENST00000483847 IGHV3OR16-9A0A0B4J2B5 98 aa6.32□□□□□ -1.4
SMARCC1-205ENST00000483847 F8WDY8 70 aa6.32□□□□□ -1.4
SMARCC1-205ENST00000483847 TMEM241Q24JQ0 296 aa6.32□□□□□ -1.4
SMARCC1-205ENST00000483847 OCC1Q8TAD7 63 aa6.32□□□□□ -1.4
SMARCC1-205ENST00000483847 ANAPC11Q9NYG5 84 aa6.32□□□□□ -1.4
SMARCC1-205ENST00000483847 SMKR1H3BMG3 65 aa6.31□□□□□ -1.4
SMARCC1-205ENST00000483847 PDE6DO43924 150 aa6.31□□□□□ -1.4
SMARCC1-205ENST00000483847 CRYGAP11844 174 aa6.31□□□□□ -1.4
SMARCC1-205ENST00000483847 FCER1GP30273 86 aa6.31□□□□□ -1.4
SMARCC1-205ENST00000483847 FAM104AQ969W3 186 aa6.31□□□□□ -1.4
SMARCC1-205ENST00000483847 IGLV7-46A0A075B6I9 117 aa6.3□□□□□ -1.4
SMARCC1-205ENST00000483847 VCYO14598 125 aa6.3□□□□□ -1.4
SMARCC1-205ENST00000483847 RAB4AP20338 218 aa6.3□□□□□ -1.4
SMARCC1-205ENST00000483847 ZNF345Q14585 488 aa6.3□□□□□ -1.4
SMARCC1-205ENST00000483847 KIAA0087Q14695 138 aa6.3□□□□□ -1.4
SMARCC1-205ENST00000483847 KRTAP13-2Q52LG2 175 aa6.3□□□□□ -1.4
SMARCC1-205ENST00000483847 ANKRD39Q53RE8 183 aa6.3□□□□□ -1.4
SMARCC1-205ENST00000483847 CTDSP1Q9GZU7 261 aa6.3□□□□□ -1.4
SMARCC1-205ENST00000483847 C2orf82Q6UX34 121 aa6.29□□□□□ -1.4
SMARCC1-205ENST00000483847 AMN1Q8IY45 258 aa6.29□□□□□ -1.4
SMARCC1-205ENST00000483847 TIMM21Q9BVV7 248 aa6.29□□□□□ -1.4
SMARCC1-205ENST00000483847 NDUFC2-KCTD14E9PQ53 114 aa6.28□□□□□ -1.4
SMARCC1-205ENST00000483847 GATCO43716 136 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-205ENST00000483847 LINC01547P58512 204 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-205ENST00000483847 RPL39P62891 51 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-205ENST00000483847 SMAGPQ0VAQ4 97 aa6.28□□□□□ -1.4
SMARCC1-205ENST00000483847 AKAP14Q86UN6 197 aa6.28□□□□□ -1.4
SMARCC1-205ENST00000483847 NRACQ8N912 160 aa6.28□□□□□ -1.4
SMARCC1-205ENST00000483847 TMEM191AQ9H0A3 160 aa6.28□□□□□ -1.4
SMARCC1-205ENST00000483847 KANTRA0A1W2PQU2 76 aa6.27□□□□□ -1.41
SMARCC1-205ENST00000483847 NUPR1O60356 82 aa6.27□□□□□ -1.41
SMARCC1-205ENST00000483847 SUMO2P61956 95 aaKnown RBP6.27□□□□□ -1.41
SMARCC1-205ENST00000483847 LINC00173Q6ZV60 143 aa6.27□□□□□ -1.41
SMARCC1-205ENST00000483847 LINC00304Q8N9R0 145 aa6.27□□□□□ -1.41
SMARCC1-205ENST00000483847 KRTAP4-1Q9BYQ7 146 aa6.27□□□□□ -1.41
SMARCC1-205ENST00000483847 C22orf24Q9Y442 160 aa6.27□□□□□ -1.41
SMARCC1-205ENST00000483847 TRBV30A0A0K0K1B3 111 aa6.26□□□□□ -1.41
SMARCC1-205ENST00000483847 A8MWL6 223 aa6.26□□□□□ -1.41
SMARCC1-205ENST00000483847 RPL28P46779 137 aaKnown RBP6.26□□□□□ -1.41
SMARCC1-205ENST00000483847 LINC00242Q5T6M2 205 aa6.26□□□□□ -1.41
SMARCC1-205ENST00000483847 LINC00469Q8N7U9 141 aa6.26□□□□□ -1.41
SMARCC1-205ENST00000483847 KIR2DL4Q99706 377 aa6.26□□□□□ -1.41
SMARCC1-205ENST00000483847 A0A1B0GUT8 65 aa6.25□□□□□ -1.41
SMARCC1-205ENST00000483847 BCE1O60756 84 aa6.25□□□□□ -1.41
SMARCC1-205ENST00000483847 SRSF3P84103 164 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-205ENST00000483847 BORCS7Q96B45 105 aa6.25□□□□□ -1.41
SMARCC1-205ENST00000483847 PPDPFQ9H3Y8 114 aa6.25□□□□□ -1.41
SMARCC1-205ENST00000483847 IFITM10A6NMD0 228 aa6.24□□□□□ -1.41
SMARCC1-205ENST00000483847 HMSDA8MTL9 139 aa6.24□□□□□ -1.41
SMARCC1-205ENST00000483847 HIGD1CA8MV81 97 aa6.24□□□□□ -1.41
SMARCC1-205ENST00000483847 H3BS24 57 aa6.24□□□□□ -1.41
SMARCC1-205ENST00000483847 TEX46H3BTG2 121 aa6.24□□□□□ -1.41
SMARCC1-205ENST00000483847 ATP6V1G1O75348 118 aa6.24□□□□□ -1.41
SMARCC1-205ENST00000483847 FAM231DQ6ZW35 169 aa6.24□□□□□ -1.41
SMARCC1-205ENST00000483847 TMEM18Q96B42 140 aa6.24□□□□□ -1.41
SMARCC1-205ENST00000483847 XAGE1AQ9HD64 81 aa6.24□□□□□ -1.41
SMARCC1-205ENST00000483847 TGIF2-C20orf24A0A0A6YYL0 155 aa6.23□□□□□ -1.41
SMARCC1-205ENST00000483847 HBBP68871 147 aa6.23□□□□□ -1.41
SMARCC1-205ENST00000483847 LBHQ53QV2 105 aaPredicted RBP6.23□□□□□ -1.41
SMARCC1-205ENST00000483847 CT83Q5H943 113 aa6.23□□□□□ -1.41
SMARCC1-205ENST00000483847 PACRGQ96M98 296 aaPredicted RBP6.23□□□□□ -1.41
SMARCC1-205ENST00000483847 ZNF727A8MUV8 499 aa6.22□□□□□ -1.41
SMARCC1-205ENST00000483847 MRPS36P82909 103 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-205ENST00000483847 NDUFA5Q16718 116 aa6.22□□□□□ -1.41
SMARCC1-205ENST00000483847 SPANXA1Q9NS26 97 aa6.22□□□□□ -1.41
SMARCC1-205ENST00000483847 RPL37AP8A6NKH3 93 aa6.21□□□□□ -1.42
SMARCC1-205ENST00000483847 PPP1R17O96001 155 aa6.21□□□□□ -1.42
SMARCC1-205ENST00000483847 ASB16-AS1Q495Z4 193 aa6.21□□□□□ -1.42
SMARCC1-205ENST00000483847 FAM229BQ4G0N7 80 aa6.21□□□□□ -1.42
SMARCC1-205ENST00000483847 MRPL51Q4U2R6 128 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-205ENST00000483847 MRPL55Q7Z7F7 128 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-205ENST00000483847 PPP1R2P9O14990 202 aa6.2□□□□□ -1.42
SMARCC1-205ENST00000483847 KRTAP13-1Q8IUC0 172 aa6.2□□□□□ -1.42
SMARCC1-205ENST00000483847 LINC00167Q96N53 147 aa6.19□□□□□ -1.42
SMARCC1-205ENST00000483847 C20orf78Q9BR46 151 aa6.19□□□□□ -1.42
SMARCC1-205ENST00000483847 TP73-AS1Q9UF72 201 aa6.19□□□□□ -1.42
SMARCC1-205ENST00000483847 TRBV24-1A0A075B6N3 115 aa6.18□□□□□ -1.42
SMARCC1-205ENST00000483847 IGKV2D-26A0A0A0MRZ7 120 aa6.18□□□□□ -1.42
SMARCC1-205ENST00000483847 GAGE10A6NGK3 116 aa6.18□□□□□ -1.42
SMARCC1-205ENST00000483847 TCAPO15273 167 aa6.18□□□□□ -1.42
SMARCC1-205ENST00000483847 S100A1P23297 94 aa6.18□□□□□ -1.42
SMARCC1-205ENST00000483847 TAGLN2P37802 199 aaKnown RBP6.18□□□□□ -1.42
SMARCC1-205ENST00000483847 RPL32P62910 135 aaKnown RBP6.18□□□□□ -1.42
SMARCC1-205ENST00000483847 RIGQ13278 110 aa6.18□□□□□ -1.42
SMARCC1-205ENST00000483847 FAM104BQ5XKR9 115 aa6.18□□□□□ -1.42
SMARCC1-205ENST00000483847 SMIM2Q9BVW6 85 aa6.18□□□□□ -1.42
SMARCC1-205ENST00000483847 TNFRSF6BO95407 300 aa6.17□□□□□ -1.42
SMARCC1-205ENST00000483847 CEBPGP53567 150 aa6.17□□□□□ -1.42
SMARCC1-205ENST00000483847 KRTAP13-3Q3SY46 172 aa6.17□□□□□ -1.42
SMARCC1-205ENST00000483847 TOMM7Q9P0U1 55 aa6.17□□□□□ -1.42
SMARCC1-205ENST00000483847 IGLV4-3A0A075B6K6 122 aa6.16□□□□□ -1.42
SMARCC1-205ENST00000483847 TMEM250H0YL14 139 aa6.16□□□□□ -1.42
SMARCC1-205ENST00000483847 UBE2AP49459 152 aa6.16□□□□□ -1.42
SMARCC1-205ENST00000483847 CKS1BP61024 79 aa6.16□□□□□ -1.42
SMARCC1-205ENST00000483847 ZC2HC1BQ5TFG8 222 aa6.16□□□□□ -1.42
SMARCC1-205ENST00000483847 LINC01551Q86U37 167 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms