RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 FAM19A3Q7Z5A8 133 aa2.98□□□□□ -1.93
SHANK2-216ENST00000482659 C9orf163Q8N9P6 203 aa2.98□□□□□ -1.93
SHANK2-216ENST00000482659 OR10D4PQ8NGN7 298 aa2.98□□□□□ -1.93
SHANK2-216ENST00000482659 PACRGQ96M98 296 aaPredicted RBP2.98□□□□□ -1.93
SHANK2-216ENST00000482659 OPRPNQ99935 248 aaPredicted RBP2.98□□□□□ -1.93
SHANK2-216ENST00000482659 KRTAP4-8Q9BYQ9 185 aa2.98□□□□□ -1.93
SHANK2-216ENST00000482659 CST9LQ9H4G1 147 aa2.98□□□□□ -1.93
SHANK2-216ENST00000482659 TMA7Q9Y2S6 64 aaKnown RBP2.98□□□□□ -1.93
SHANK2-216ENST00000482659 PCLOQ9Y6V0 5065 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 IGHV3-64A0A075B6Q5 118 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 TINCRA0A1B0GVN0 87 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 H3BRM9 83 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 PRSS2P07478 247 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 NDUFA6P56556 154 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 WFDC2Q14508 124 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 C21orf62-AS1Q17RA5 79 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 PDZD11Q5EBL8 140 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 C5orf38Q86SI9 138 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 LINC00474Q9P2X8 69 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 KMT2CQ8NEZ4 4911 aaKnown RBP2.97□□□□□ -1.93
SHANK2-216ENST00000482659 RYR3Q15413 4870 aa2.97□□□□□ -1.93
SHANK2-216ENST00000482659 IGLV4-69A0A075B6H9 119 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 SCO1O75880 301 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 LEPROTL1O95214 131 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 LINC00310P59036 64 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 CKS1BP61024 79 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 SPAG11BQ08648 103 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 SYCNQ0VAF6 134 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 RNF151Q2KHN1 245 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 HIGD2BQ4VC39 106 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 C15orf56Q8N910 161 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 FAM104AQ969W3 186 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 IFI27L1Q96BM0 104 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 DPH3Q96FX2 82 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 URB1-AS1Q96HZ7 61 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 C2orf48Q96LS8 159 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 CAMK2N2Q96S95 79 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 STARD9Q9P2P6 4700 aa2.96□□□□□ -1.94
SHANK2-216ENST00000482659 A0A096LNJ9 63 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 TRAV12-1A0A0B4J245 112 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 A0A0J9YXV3 536 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 ATP6V1G1O75348 118 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 SERF1AO75920 110 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 IGLC3P0DOY3 106 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 CXCL5P42830 114 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 KRTAP10-1P60331 282 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 PMCHL1Q16048 86 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 C6orf226Q5I0X4 101 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 SFTA2Q6UW10 78 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 SDIM1Q6ZPB5 146 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 LINC00173Q6ZV60 143 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 LINC00469Q8N7U9 141 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 ORAOV1Q8WV07 137 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 CARD19Q96LW7 228 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 MAP1LC3CQ9BXW4 147 aa2.95□□□□□ -1.94
SHANK2-216ENST00000482659 MRPL35Q9NZE8 188 aaKnown RBP2.95□□□□□ -1.94
SHANK2-216ENST00000482659 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 CSMD3Q7Z407 3707 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 IGLV5-45A0A087WSX0 123 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 F8VRH5 84 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 NDUFA1O15239 70 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 HIST1H2BKO60814 126 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 SLPIP03973 132 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 PLA2G1BP04054 148 aaKnown RBP2.94□□□□□ -1.94
SHANK2-216ENST00000482659 HIST1H2BJP06899 126 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 HIST1H2BOP23527 126 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 HIST1H2BBP33778 126 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 FUSP35637 526 aaKnown RBP eCLIP2.94□□□□□ -1.941e-6■□□□□ 8.7
SHANK2-216ENST00000482659 AKR1D1P51857 326 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 HIST1H2BDP58876 126 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 HIST1H2BCP62807 126 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 COX6A2Q02221 97 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 HIST2H2BEQ16778 126 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.94□□□□□ -1.94
SHANK2-216ENST00000482659 Q6ZSA8 131 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 Q8IZM0 81 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 HIST1H2BHQ93079 126 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 HIST1H2BNQ99877 126 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 HIST1H2BMQ99879 126 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 CHAC1Q9BUX1 264 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 CDKN2A-AS1Q9UH64 79 aa2.94□□□□□ -1.94
SHANK2-216ENST00000482659 CHTOPQ9Y3Y2 248 aaKnown RBP2.94□□□□□ -1.94
SHANK2-216ENST00000482659 RYR2Q92736 4967 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 TRBV30A0A0K0K1B3 111 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 LOC107984640A0A0U1RRK4 108 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 LINC00587B1AMM8 73 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 FABP4P15090 132 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 PLNP26678 52 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 XGP55808 180 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 COA6Q5JTJ3 125 aaKnown RBP2.93□□□□□ -1.94
SHANK2-216ENST00000482659 TMEM170BQ5T4T1 132 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 ZC2HC1BQ5TFG8 222 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 Q6ZRU5 148 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 FAM19A2Q8N3H0 131 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 TOMM7Q9P0U1 55 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 DYNC2H1Q8NCM8 4307 aaKnown RBP2.93□□□□□ -1.94
SHANK2-216ENST00000482659 DNAH7Q8WXX0 4024 aa2.93□□□□□ -1.94
SHANK2-216ENST00000482659 C20orf202A1L168 122 aa2.92□□□□□ -1.94
SHANK2-216ENST00000482659 SMIM1B2RUZ4 78 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms