RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.54□□□□□ -1.36
CPSF4-212ENST00000482251 APOMO95445 188 aa6.54□□□□□ -1.36
CPSF4-212ENST00000482251 PPBPP02775 128 aa6.54□□□□□ -1.36
CPSF4-212ENST00000482251 RAB5AP20339 215 aa6.54□□□□□ -1.36
CPSF4-212ENST00000482251 RAB14P61106 215 aa6.54□□□□□ -1.36
CPSF4-212ENST00000482251 SERTAD4-AS1Q5TG53 156 aa6.54□□□□□ -1.36
CPSF4-212ENST00000482251 IFI27P40305 119 aaPredicted RBP6.53□□□□□ -1.36
CPSF4-212ENST00000482251 MRPS36P82909 103 aaKnown RBP6.53□□□□□ -1.36
CPSF4-212ENST00000482251 PNRC1Q12796 327 aaPredicted RBP6.53□□□□□ -1.36
CPSF4-212ENST00000482251 MAP1LC3AQ9H492 121 aa6.53□□□□□ -1.36
CPSF4-212ENST00000482251 PLA2G2DQ9UNK4 145 aa6.53□□□□□ -1.36
CPSF4-212ENST00000482251 IGLV4-3A0A075B6K6 122 aa6.52□□□□□ -1.37
CPSF4-212ENST00000482251 IGHV3OR16-9A0A0B4J2B5 98 aa6.52□□□□□ -1.37
CPSF4-212ENST00000482251 MT-ND4LP03901 98 aa6.52□□□□□ -1.37
CPSF4-212ENST00000482251 ZC2HC1BQ5TFG8 222 aa6.52□□□□□ -1.37
CPSF4-212ENST00000482251 OR10D4PQ8NGN7 298 aa6.52□□□□□ -1.37
CPSF4-212ENST00000482251 C2orf48Q96LS8 159 aa6.52□□□□□ -1.37
CPSF4-212ENST00000482251 TGIF2-C20orf24A0A0A6YYL0 155 aa6.51□□□□□ -1.37
CPSF4-212ENST00000482251 A0A1W2PNN7 141 aa6.51□□□□□ -1.37
CPSF4-212ENST00000482251 ODF1Q14990 250 aa6.51□□□□□ -1.37
CPSF4-212ENST00000482251 C10orf25Q5T742 122 aa6.51□□□□□ -1.37
CPSF4-212ENST00000482251 ANAPC16Q96DE5 110 aa6.51□□□□□ -1.37
CPSF4-212ENST00000482251 ADCYAP1P18509 176 aa6.5□□□□□ -1.37
CPSF4-212ENST00000482251 C9orf116Q5BN46 136 aaPredicted RBP6.5□□□□□ -1.37
CPSF4-212ENST00000482251 TMEM141Q96I45 108 aa6.5□□□□□ -1.37
CPSF4-212ENST00000482251 NDUFA1O15239 70 aa6.49□□□□□ -1.37
CPSF4-212ENST00000482251 CLLU1Q5K131 121 aa6.49□□□□□ -1.37
CPSF4-212ENST00000482251 LINC00242Q5T6M2 205 aa6.49□□□□□ -1.37
CPSF4-212ENST00000482251 C2orf66Q6UXQ4 117 aa6.49□□□□□ -1.37
CPSF4-212ENST00000482251 UNQ6190/PRO20217Q6UXQ8 127 aa6.49□□□□□ -1.37
CPSF4-212ENST00000482251 TEX43Q6ZNM6 134 aa6.49□□□□□ -1.37
CPSF4-212ENST00000482251 Q6ZRP5 223 aa6.49□□□□□ -1.37
CPSF4-212ENST00000482251 PHF5AQ7RTV0 110 aaKnown RBP6.49□□□□□ -1.37
CPSF4-212ENST00000482251 C6orf48Q9UBA6 75 aa6.49□□□□□ -1.37
CPSF4-212ENST00000482251 CYSLTR1Q9Y271 337 aa6.49□□□□□ -1.37
CPSF4-212ENST00000482251 LAMTOR2Q9Y2Q5 125 aa6.49□□□□□ -1.37
CPSF4-212ENST00000482251 FAM168BA1KXE4 195 aa6.48□□□□□ -1.37
CPSF4-212ENST00000482251 KIAA1644Q3SXP7 199 aa6.48□□□□□ -1.37
CPSF4-212ENST00000482251 LINC00173Q6ZV60 143 aa6.48□□□□□ -1.37
CPSF4-212ENST00000482251 Q8N8P6 123 aa6.48□□□□□ -1.37
CPSF4-212ENST00000482251 C2orf88Q9BSF0 95 aa6.48□□□□□ -1.37
CPSF4-212ENST00000482251 CTDSP1Q9GZU7 261 aa6.48□□□□□ -1.37
CPSF4-212ENST00000482251 MRPL35Q9NZE8 188 aaKnown RBP6.48□□□□□ -1.37
CPSF4-212ENST00000482251 PYGO1Q9Y3Y4 419 aa6.48□□□□□ -1.37
CPSF4-212ENST00000482251 UBR4Q5T4S7 5183 aa6.48□□□□□ -1.37
CPSF4-212ENST00000482251 TNXBP22105 4242 aa6.48□□□□□ -1.37
CPSF4-212ENST00000482251 A0A087WZ39 114 aa6.47□□□□□ -1.37
CPSF4-212ENST00000482251 UBE2D1P51668 147 aa6.47□□□□□ -1.37
CPSF4-212ENST00000482251 GAGE2EQ4V326 116 aa6.47□□□□□ -1.37
CPSF4-212ENST00000482251 C2orf82Q6UX34 121 aa6.47□□□□□ -1.37
CPSF4-212ENST00000482251 Q6ZN92 141 aa6.47□□□□□ -1.37
CPSF4-212ENST00000482251 FAM19A5Q7Z5A7 132 aaPredicted RBP6.47□□□□□ -1.37
CPSF4-212ENST00000482251 GAGE2DQ9UEU5 116 aa6.47□□□□□ -1.37
CPSF4-212ENST00000482251 PRSS47A8MTI9 375 aa6.46□□□□□ -1.38
CPSF4-212ENST00000482251 MT-ND6P03923 174 aa6.46□□□□□ -1.38
CPSF4-212ENST00000482251 IFITM2Q01629 132 aa6.46□□□□□ -1.38
CPSF4-212ENST00000482251 RNF151Q2KHN1 245 aa6.46□□□□□ -1.38
CPSF4-212ENST00000482251 ORMDL2Q53FV1 153 aa6.46□□□□□ -1.38
CPSF4-212ENST00000482251 SPINK6Q6UWN8 80 aa6.46□□□□□ -1.38
CPSF4-212ENST00000482251 IMMP2LQ96T52 175 aa6.46□□□□□ -1.38
CPSF4-212ENST00000482251 PSORS1C2Q9UIG4 136 aa6.46□□□□□ -1.38
CPSF4-212ENST00000482251 KIAA0087Q14695 138 aa6.45□□□□□ -1.38
CPSF4-212ENST00000482251 C1orf137Q5JT78 98 aa6.45□□□□□ -1.38
CPSF4-212ENST00000482251 LINC01600Q96MT4 127 aa6.45□□□□□ -1.38
CPSF4-212ENST00000482251 VCX2Q9H322 139 aa6.45□□□□□ -1.38
CPSF4-212ENST00000482251 NXT2Q9NPJ8 142 aaKnown RBP6.45□□□□□ -1.38
CPSF4-212ENST00000482251 TOMM7Q9P0U1 55 aa6.45□□□□□ -1.38
CPSF4-212ENST00000482251 TMEM218A2RU14 115 aa6.44□□□□□ -1.38
CPSF4-212ENST00000482251 REG3GQ6UW15 175 aa6.44□□□□□ -1.38
CPSF4-212ENST00000482251 KRTAP11-1Q8IUC1 163 aa6.44□□□□□ -1.38
CPSF4-212ENST00000482251 AMELXQ99217 191 aa6.44□□□□□ -1.38
CPSF4-212ENST00000482251 IGIPA6NJ69 53 aa6.43□□□□□ -1.38
CPSF4-212ENST00000482251 F8WDY8 70 aa6.43□□□□□ -1.38
CPSF4-212ENST00000482251 TLX1NBP0CAT3 122 aa6.43□□□□□ -1.38
CPSF4-212ENST00000482251 SRSF9Q13242 221 aaKnown RBP eCLIP6.43□□□□□ -1.38
CPSF4-212ENST00000482251 UQCC3Q6UW78 93 aa6.43□□□□□ -1.38
CPSF4-212ENST00000482251 COMMD7Q86VX2 200 aa6.43□□□□□ -1.38
CPSF4-212ENST00000482251 PACRGQ96M98 296 aaPredicted RBP6.43□□□□□ -1.38
CPSF4-212ENST00000482251 TRBV30A0A0K0K1B3 111 aa6.42□□□□□ -1.38
CPSF4-212ENST00000482251 M0QXV9 152 aa6.42□□□□□ -1.38
CPSF4-212ENST00000482251 PRSS2P07478 247 aa6.42□□□□□ -1.38
CPSF4-212ENST00000482251 KRTAP7-1Q8IUC3 87 aa6.42□□□□□ -1.38
CPSF4-212ENST00000482251 NDUFC2-KCTD14E9PQ53 114 aa6.41□□□□□ -1.38
CPSF4-212ENST00000482251 K7EMI3 77 aa6.41□□□□□ -1.38
CPSF4-212ENST00000482251 S100PP25815 95 aa6.41□□□□□ -1.38
CPSF4-212ENST00000482251 CKS1BP61024 79 aa6.41□□□□□ -1.38
CPSF4-212ENST00000482251 C9orf129Q5T035 196 aaKnown RBP6.41□□□□□ -1.38
CPSF4-212ENST00000482251 LINC00469Q8N7U9 141 aa6.41□□□□□ -1.38
CPSF4-212ENST00000482251 TOMM6Q96B49 74 aa6.41□□□□□ -1.38
CPSF4-212ENST00000482251 CDKN2A-AS1Q9UH64 79 aa6.41□□□□□ -1.38
CPSF4-212ENST00000482251 TRAV9-1A0A075B6T8 112 aa6.4□□□□□ -1.38
CPSF4-212ENST00000482251 HERVK_113P63121 156 aa6.4□□□□□ -1.38
CPSF4-212ENST00000482251 UBE2BP63146 152 aa6.4□□□□□ -1.38
CPSF4-212ENST00000482251 SCGB3A1Q96QR1 104 aa6.4□□□□□ -1.38
CPSF4-212ENST00000482251 TIMM17AQ99595 171 aa6.4□□□□□ -1.38
CPSF4-212ENST00000482251 ALKBH7Q9BT30 221 aaPredicted RBP6.4□□□□□ -1.38
CPSF4-212ENST00000482251 SEC11CQ9BY50 192 aa6.4□□□□□ -1.38
CPSF4-212ENST00000482251 GEMIN7Q9H840 131 aaKnown RBP6.4□□□□□ -1.38
CPSF4-212ENST00000482251 IGLV7-43P04211 117 aa6.39□□□□□ -1.39
CPSF4-212ENST00000482251 NPSP0C0P6 89 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms