RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 RPL18AQ02543 176 aaKnown RBP11.49□□□□□ -0.57
CLK1-211ENST00000481641 Q6ZRP5 223 aa11.49□□□□□ -0.57
CLK1-211ENST00000481641 S100A8P05109 93 aa11.48□□□□□ -0.57
CLK1-211ENST00000481641 SRSF9Q13242 221 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLK1-211ENST00000481641 SPINK6Q6UWN8 80 aa11.48□□□□□ -0.57
CLK1-211ENST00000481641 SPANXA1Q9NS26 97 aa11.48□□□□□ -0.57
CLK1-211ENST00000481641 C9orf116Q5BN46 136 aaPredicted RBP11.47□□□□□ -0.57
CLK1-211ENST00000481641 ORAOV1Q8WV07 137 aa11.47□□□□□ -0.57
CLK1-211ENST00000481641 IGHV3OR16-9A0A0B4J2B5 98 aa11.46□□□□□ -0.57
CLK1-211ENST00000481641 IFITM10A6NMD0 228 aa11.46□□□□□ -0.57
CLK1-211ENST00000481641 MRPS36P82909 103 aaKnown RBP11.46□□□□□ -0.57
CLK1-211ENST00000481641 PPBPP02775 128 aa11.45□□□□□ -0.58
CLK1-211ENST00000481641 TMEM136Q6ZRR5 245 aa11.45□□□□□ -0.58
CLK1-211ENST00000481641 OR10D4PQ8NGN7 298 aa11.45□□□□□ -0.58
CLK1-211ENST00000481641 C10orf25Q5T742 122 aa11.44□□□□□ -0.58
CLK1-211ENST00000481641 PHF5AQ7RTV0 110 aaKnown RBP11.44□□□□□ -0.58
CLK1-211ENST00000481641 ORMDL3Q8N138 153 aa11.44□□□□□ -0.58
CLK1-211ENST00000481641 PRELID3AQ96N28 172 aa11.44□□□□□ -0.58
CLK1-211ENST00000481641 KRTAP10-8P60410 259 aa11.43□□□□□ -0.58
CLK1-211ENST00000481641 RNF151Q2KHN1 245 aa11.43□□□□□ -0.58
CLK1-211ENST00000481641 REG3GQ6UW15 175 aa11.43□□□□□ -0.58
CLK1-211ENST00000481641 PSORS1C2Q9UIG4 136 aa11.43□□□□□ -0.58
CLK1-211ENST00000481641 LOC389332A0A1B0GUA5 103 aa11.42□□□□□ -0.58
CLK1-211ENST00000481641 RAB5AP20339 215 aa11.42□□□□□ -0.58
CLK1-211ENST00000481641 UNQ6190/PRO20217Q6UXQ8 127 aa11.42□□□□□ -0.58
CLK1-211ENST00000481641 ATP5L2Q7Z4Y8 100 aa11.42□□□□□ -0.58
CLK1-211ENST00000481641 MRPL35Q9NZE8 188 aaKnown RBP11.42□□□□□ -0.58
CLK1-211ENST00000481641 LRP2P98164 4655 aa11.41□□□□□ -0.58
CLK1-211ENST00000481641 IGLV4-3A0A075B6K6 122 aa11.4□□□□□ -0.58
CLK1-211ENST00000481641 FAM168BA1KXE4 195 aa11.4□□□□□ -0.58
CLK1-211ENST00000481641 NDUFA1O15239 70 aa11.4□□□□□ -0.58
CLK1-211ENST00000481641 MT-ND6P03923 174 aa11.4□□□□□ -0.58
CLK1-211ENST00000481641 IFI27P40305 119 aaPredicted RBP11.4□□□□□ -0.58
CLK1-211ENST00000481641 C6orf48Q9UBA6 75 aa11.4□□□□□ -0.58
CLK1-211ENST00000481641 LINC00242Q5T6M2 205 aa11.39□□□□□ -0.59
CLK1-211ENST00000481641 ZC2HC1BQ5TFG8 222 aa11.39□□□□□ -0.59
CLK1-211ENST00000481641 TGIF2-C20orf24A0A0A6YYL0 155 aa11.38□□□□□ -0.59
CLK1-211ENST00000481641 C1orf137Q5JT78 98 aa11.38□□□□□ -0.59
CLK1-211ENST00000481641 IMMP2LQ96T52 175 aa11.38□□□□□ -0.59
CLK1-211ENST00000481641 PYGO1Q9Y3Y4 419 aa11.38□□□□□ -0.59
CLK1-211ENST00000481641 F8WDY8 70 aa11.37□□□□□ -0.59
CLK1-211ENST00000481641 KIAA0087Q14695 138 aa11.37□□□□□ -0.59
CLK1-211ENST00000481641 GAGE2EQ4V326 116 aa11.37□□□□□ -0.59
CLK1-211ENST00000481641 KRTAP11-1Q8IUC1 163 aa11.37□□□□□ -0.59
CLK1-211ENST00000481641 GAGE2DQ9UEU5 116 aa11.37□□□□□ -0.59
CLK1-211ENST00000481641 A0A087WZ39 114 aa11.36□□□□□ -0.59
CLK1-211ENST00000481641 PRSS47A8MTI9 375 aa11.36□□□□□ -0.59
CLK1-211ENST00000481641 TMEM141Q96I45 108 aa11.36□□□□□ -0.59
CLK1-211ENST00000481641 MAP1LC3AQ9H492 121 aa11.36□□□□□ -0.59
CLK1-211ENST00000481641 C2orf82Q6UX34 121 aa11.35□□□□□ -0.59
CLK1-211ENST00000481641 FAM19A5Q7Z5A7 132 aaPredicted RBP11.35□□□□□ -0.59
CLK1-211ENST00000481641 MT-ND4LP03901 98 aa11.34□□□□□ -0.59
CLK1-211ENST00000481641 TLX1NBP0CAT3 122 aa11.34□□□□□ -0.59
CLK1-211ENST00000481641 UBE2D1P51668 147 aa11.34□□□□□ -0.59
CLK1-211ENST00000481641 C2orf66Q6UXQ4 117 aa11.34□□□□□ -0.59
CLK1-211ENST00000481641 TEX43Q6ZNM6 134 aa11.34□□□□□ -0.59
CLK1-211ENST00000481641 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
CLK1-211ENST00000481641 Q8N8P6 123 aa11.34□□□□□ -0.59
CLK1-211ENST00000481641 ANAPC16Q96DE5 110 aa11.34□□□□□ -0.59
CLK1-211ENST00000481641 PNRC1Q12796 327 aaPredicted RBP11.33□□□□□ -0.6
CLK1-211ENST00000481641 LINC00173Q6ZV60 143 aa11.33□□□□□ -0.6
CLK1-211ENST00000481641 LAMTOR2Q9Y2Q5 125 aa11.33□□□□□ -0.6
CLK1-211ENST00000481641 CYSLTR1Q9Y271 337 aa11.32□□□□□ -0.6
CLK1-211ENST00000481641 IGLV7-43P04211 117 aa11.3□□□□□ -0.6
CLK1-211ENST00000481641 RAB14P61106 215 aa11.3□□□□□ -0.6
CLK1-211ENST00000481641 AMELXQ99217 191 aa11.3□□□□□ -0.6
CLK1-211ENST00000481641 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
CLK1-211ENST00000481641 VCX2Q9H322 139 aa11.29□□□□□ -0.6
CLK1-211ENST00000481641 TRBV30A0A0K0K1B3 111 aa11.28□□□□□ -0.6
CLK1-211ENST00000481641 IGIPA6NJ69 53 aa11.28□□□□□ -0.6
CLK1-211ENST00000481641 ORMDL2Q53FV1 153 aa11.28□□□□□ -0.6
CLK1-211ENST00000481641 C9orf129Q5T035 196 aaKnown RBP11.28□□□□□ -0.6
CLK1-211ENST00000481641 Q6ZN92 141 aa11.28□□□□□ -0.6
CLK1-211ENST00000481641 M0QXV9 152 aa11.27□□□□□ -0.61
CLK1-211ENST00000481641 KIAA1644Q3SXP7 199 aa11.27□□□□□ -0.61
CLK1-211ENST00000481641 LINC01561Q8N1V8 128 aa11.27□□□□□ -0.61
CLK1-211ENST00000481641 PACRGQ96M98 296 aaPredicted RBP11.27□□□□□ -0.61
CLK1-211ENST00000481641 CTDSP1Q9GZU7 261 aa11.27□□□□□ -0.61
CLK1-211ENST00000481641 TOMM7Q9P0U1 55 aa11.27□□□□□ -0.61
CLK1-211ENST00000481641 NDUFC2-KCTD14E9PQ53 114 aa11.26□□□□□ -0.61
CLK1-211ENST00000481641 PRR26Q8N8Z3 221 aa11.26□□□□□ -0.61
CLK1-211ENST00000481641 UBE2BP63146 152 aa11.25□□□□□ -0.61
CLK1-211ENST00000481641 DIRC1Q969H9 104 aa11.25□□□□□ -0.61
CLK1-211ENST00000481641 PRSS2P07478 247 aa11.24□□□□□ -0.61
CLK1-211ENST00000481641 ADCYAP1P18509 176 aa11.24□□□□□ -0.61
CLK1-211ENST00000481641 LINC00469Q8N7U9 141 aa11.24□□□□□ -0.61
CLK1-211ENST00000481641 NXT2Q9NPJ8 142 aaKnown RBP11.24□□□□□ -0.61
CLK1-211ENST00000481641 H0Y9J4 135 aa11.23□□□□□ -0.61
CLK1-211ENST00000481641 FAM19A3Q7Z5A8 133 aa11.23□□□□□ -0.61
CLK1-211ENST00000481641 K7EMI3 77 aa11.22□□□□□ -0.61
CLK1-211ENST00000481641 NPSP0C0P6 89 aa11.22□□□□□ -0.61
CLK1-211ENST00000481641 CKS1BP61024 79 aa11.22□□□□□ -0.61
CLK1-211ENST00000481641 C6orf226Q5I0X4 101 aa11.22□□□□□ -0.61
CLK1-211ENST00000481641 CLLU1Q5K131 121 aa11.22□□□□□ -0.61
CLK1-211ENST00000481641 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
CLK1-211ENST00000481641 CDKN2A-AS1Q9UH64 79 aa11.22□□□□□ -0.61
CLK1-211ENST00000481641 RNF213Q63HN8 5207 aa11.21□□□□□ -0.61
CLK1-211ENST00000481641 TOMM6Q96B49 74 aa11.21□□□□□ -0.61
CLK1-211ENST00000481641 Q8IZM0 81 aa11.2□□□□□ -0.62
CLK1-211ENST00000481641 HERVK_113P63121 156 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 247.3 ms