RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 CD164L2Q6UWJ8 174 aa6.88□□□□□ -1.31
USP39-215ENST00000481409 CHAC1Q9BUX1 264 aa6.88□□□□□ -1.31
USP39-215ENST00000481409 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
USP39-215ENST00000481409 RNASE13Q5GAN3 156 aaKnown RBP6.87□□□□□ -1.31
USP39-215ENST00000481409 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
USP39-215ENST00000481409 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
USP39-215ENST00000481409 IGHV3OR16-9A0A0B4J2B5 98 aa6.86□□□□□ -1.31
USP39-215ENST00000481409 ZC2HC1BQ5TFG8 222 aa6.86□□□□□ -1.31
USP39-215ENST00000481409 UBE2WQ96B02 151 aa6.86□□□□□ -1.31
USP39-215ENST00000481409 VAMP8Q9BV40 100 aa6.86□□□□□ -1.31
USP39-215ENST00000481409 DYNC2H1Q8NCM8 4307 aaKnown RBP6.85□□□□□ -1.31
USP39-215ENST00000481409 A0A087WZ39 114 aa6.85□□□□□ -1.31
USP39-215ENST00000481409 ZNF22P17026 224 aaPredicted RBP6.85□□□□□ -1.31
USP39-215ENST00000481409 TMEM170BQ5T4T1 132 aa6.85□□□□□ -1.31
USP39-215ENST00000481409 LINC00469Q8N7U9 141 aa6.85□□□□□ -1.31
USP39-215ENST00000481409 CHCHD10Q8WYQ3 142 aaPredicted RBP6.85□□□□□ -1.31
USP39-215ENST00000481409 C1orf43Q9BWL3 253 aa6.85□□□□□ -1.31
USP39-215ENST00000481409 TM2D2Q9BX73 214 aa6.85□□□□□ -1.31
USP39-215ENST00000481409 DNAH7Q8WXX0 4024 aa6.85□□□□□ -1.31
USP39-215ENST00000481409 IGKV3OR2-268A0A0C4DH90 116 aa6.84□□□□□ -1.31
USP39-215ENST00000481409 NBDYA0A0U1RRE5 68 aa6.84□□□□□ -1.31
USP39-215ENST00000481409 TMEM223A0PJW6 202 aa6.84□□□□□ -1.31
USP39-215ENST00000481409 APOMO95445 188 aa6.84□□□□□ -1.31
USP39-215ENST00000481409 SFTA2Q6UW10 78 aa6.84□□□□□ -1.31
USP39-215ENST00000481409 Q8N3U1 123 aa6.84□□□□□ -1.31
USP39-215ENST00000481409 PMCHL2Q9BQD1 86 aa6.84□□□□□ -1.31
USP39-215ENST00000481409 IGHV1-58A0A0C4DH39 117 aa6.83□□□□□ -1.32
USP39-215ENST00000481409 E9PLD3 99 aa6.83□□□□□ -1.32
USP39-215ENST00000481409 COX7A2LO14548 114 aa6.83□□□□□ -1.32
USP39-215ENST00000481409 XCL1P47992 114 aa6.83□□□□□ -1.32
USP39-215ENST00000481409 LINC00518Q8N0U6 118 aa6.83□□□□□ -1.32
USP39-215ENST00000481409 LINC00476Q8WZB0 136 aa6.83□□□□□ -1.32
USP39-215ENST00000481409 PLEKHB2Q96CS7 222 aa6.83□□□□□ -1.32
USP39-215ENST00000481409 CDKN2A-AS1Q9UH64 79 aa6.83□□□□□ -1.32
USP39-215ENST00000481409 COX6A2Q02221 97 aa6.82□□□□□ -1.32
USP39-215ENST00000481409 FOXI1Q12951 378 aa6.82□□□□□ -1.32
USP39-215ENST00000481409 CFAP161Q6P656 301 aa6.82□□□□□ -1.32
USP39-215ENST00000481409 CLPSL2Q6UWE3 100 aa6.82□□□□□ -1.32
USP39-215ENST00000481409 C12orf57Q99622 126 aa6.82□□□□□ -1.32
USP39-215ENST00000481409 IGLV5-39A0A0G2JS06 123 aa6.81□□□□□ -1.32
USP39-215ENST00000481409 GAGE12HA6NDE8 117 aa6.81□□□□□ -1.32
USP39-215ENST00000481409 F8WDY8 70 aa6.81□□□□□ -1.32
USP39-215ENST00000481409 LEPROTO15243 131 aa6.81□□□□□ -1.32
USP39-215ENST00000481409 MALP21145 153 aa6.81□□□□□ -1.32
USP39-215ENST00000481409 NMUP48645 174 aa6.81□□□□□ -1.32
USP39-215ENST00000481409 TNP2Q05952 138 aa6.81□□□□□ -1.32
USP39-215ENST00000481409 ATOH7Q8N100 152 aa6.81□□□□□ -1.32
USP39-215ENST00000481409 CSMD3Q7Z407 3707 aa6.8□□□□□ -1.32
USP39-215ENST00000481409 IGKV2D-24A0A075B6R9 120 aa6.8□□□□□ -1.32
USP39-215ENST00000481409 SMIM1B2RUZ4 78 aa6.8□□□□□ -1.32
USP39-215ENST00000481409 CXCL5P42830 114 aa6.8□□□□□ -1.32
USP39-215ENST00000481409 SPATA45Q537H7 98 aa6.8□□□□□ -1.32
USP39-215ENST00000481409 KRTAP26-1Q6PEX3 210 aa6.8□□□□□ -1.32
USP39-215ENST00000481409 STPG4Q8N801 248 aa6.8□□□□□ -1.32
USP39-215ENST00000481409 IGLV10-54A0A075B6I4 117 aa6.79□□□□□ -1.32
USP39-215ENST00000481409 IGHV3-64A0A075B6Q5 118 aa6.79□□□□□ -1.32
USP39-215ENST00000481409 hDV102S1A0JD36 115 aa6.79□□□□□ -1.32
USP39-215ENST00000481409 DLEU1O43261 78 aa6.79□□□□□ -1.32
USP39-215ENST00000481409 LY6G6CO95867 125 aa6.79□□□□□ -1.32
USP39-215ENST00000481409 XP32Q5T750 250 aa6.79□□□□□ -1.32
USP39-215ENST00000481409 Q6ZR54 194 aa6.79□□□□□ -1.32
USP39-215ENST00000481409 C5orf38Q86SI9 138 aa6.79□□□□□ -1.32
USP39-215ENST00000481409 Q8IZM0 81 aa6.79□□□□□ -1.32
USP39-215ENST00000481409 PAM16Q9Y3D7 125 aa6.79□□□□□ -1.32
USP39-215ENST00000481409 TGP01266 2768 aa6.79□□□□□ -1.32
USP39-215ENST00000481409 J3QQQ9 107 aa6.78□□□□□ -1.32
USP39-215ENST00000481409 PRSS2P07478 247 aa6.78□□□□□ -1.32
USP39-215ENST00000481409 COX8AP10176 69 aa6.78□□□□□ -1.32
USP39-215ENST00000481409 LGALS3P17931 250 aaKnown RBP6.78□□□□□ -1.32
USP39-215ENST00000481409 Q9HAA7 133 aa6.78□□□□□ -1.32
USP39-215ENST00000481409 STARD9Q9P2P6 4700 aa6.78□□□□□ -1.32
USP39-215ENST00000481409 LINC00587B1AMM8 73 aa6.77□□□□□ -1.33
USP39-215ENST00000481409 TSTD3H0UI37 97 aa6.77□□□□□ -1.33
USP39-215ENST00000481409 GHRHP01286 108 aa6.77□□□□□ -1.33
USP39-215ENST00000481409 SPINK8P0C7L1 97 aa6.77□□□□□ -1.33
USP39-215ENST00000481409 HERV-K104P63124 156 aa6.77□□□□□ -1.33
USP39-215ENST00000481409 C14orf177Q52M58 125 aa6.77□□□□□ -1.33
USP39-215ENST00000481409 ANKRD39Q53RE8 183 aa6.77□□□□□ -1.33
USP39-215ENST00000481409 COX7B2Q8TF08 81 aa6.77□□□□□ -1.33
USP39-215ENST00000481409 KRTAP1-5Q9BYS1 174 aa6.77□□□□□ -1.33
USP39-215ENST00000481409 MYMXA0A1B0GTQ4 84 aa6.76□□□□□ -1.33
USP39-215ENST00000481409 PSCAO43653 123 aa6.76□□□□□ -1.33
USP39-215ENST00000481409 MAJINQ3KP22 176 aa6.76□□□□□ -1.33
USP39-215ENST00000481409 CDPF1Q6NVV7 123 aa6.76□□□□□ -1.33
USP39-215ENST00000481409 SLC25A34Q6PIV7 304 aa6.76□□□□□ -1.33
USP39-215ENST00000481409 BOD1L2Q8IYS8 172 aa6.76□□□□□ -1.33
USP39-215ENST00000481409 C6orf223Q8N319 242 aa6.76□□□□□ -1.33
USP39-215ENST00000481409 SVIPQ8NHG7 77 aa6.76□□□□□ -1.33
USP39-215ENST00000481409 UQCR10Q9UDW1 63 aa6.76□□□□□ -1.33
USP39-215ENST00000481409 PLECQ15149 4684 aaKnown RBP6.75□□□□□ -1.33
USP39-215ENST00000481409 GVQW2A0A096LPI5 108 aaPredicted RBP6.75□□□□□ -1.33
USP39-215ENST00000481409 NDUFA1O15239 70 aa6.75□□□□□ -1.33
USP39-215ENST00000481409 C6orf226Q5I0X4 101 aa6.75□□□□□ -1.33
USP39-215ENST00000481409 ORAOV1Q8WV07 137 aa6.75□□□□□ -1.33
USP39-215ENST00000481409 C2orf48Q96LS8 159 aa6.75□□□□□ -1.33
USP39-215ENST00000481409 IGKV2D-26A0A0A0MRZ7 120 aa6.74□□□□□ -1.33
USP39-215ENST00000481409 LCE6AA0A183 80 aa6.74□□□□□ -1.33
USP39-215ENST00000481409 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
USP39-215ENST00000481409 GCSHP23434 173 aa6.74□□□□□ -1.33
USP39-215ENST00000481409 CKS1BP61024 79 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms