RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 RPL39P62891 51 aaKnown RBP5.67□□□□□ -1.5
SMARCE1-210ENST00000481231 BLOC1S1P78537 153 aa5.67□□□□□ -1.5
SMARCE1-210ENST00000481231 MRPL51Q4U2R6 128 aaKnown RBP5.67□□□□□ -1.5
SMARCE1-210ENST00000481231 FAM19A5Q7Z5A7 132 aaPredicted RBP5.67□□□□□ -1.5
SMARCE1-210ENST00000481231 FAM104AQ969W3 186 aa5.67□□□□□ -1.5
SMARCE1-210ENST00000481231 IMMP2LQ96T52 175 aa5.67□□□□□ -1.5
SMARCE1-210ENST00000481231 V9GYV3 84 aa5.67□□□□□ -1.5
SMARCE1-210ENST00000481231 IGHV3OR16-9A0A0B4J2B5 98 aa5.66□□□□□ -1.5
SMARCE1-210ENST00000481231 ZNF727A8MUV8 499 aa5.66□□□□□ -1.5
SMARCE1-210ENST00000481231 PPP1R2P9O14990 202 aa5.66□□□□□ -1.5
SMARCE1-210ENST00000481231 NDUFA1O15239 70 aa5.66□□□□□ -1.5
SMARCE1-210ENST00000481231 KRTAP1-4P0C5Y4 121 aa5.66□□□□□ -1.5
SMARCE1-210ENST00000481231 FAM104BQ5XKR9 115 aa5.66□□□□□ -1.5
SMARCE1-210ENST00000481231 UNQ6190/PRO20217Q6UXQ8 127 aa5.66□□□□□ -1.5
SMARCE1-210ENST00000481231 TMEM18Q96B42 140 aa5.66□□□□□ -1.5
SMARCE1-210ENST00000481231 C6orf48Q9UBA6 75 aa5.66□□□□□ -1.5
SMARCE1-210ENST00000481231 IGLV1-50A0A075B6I6 118 aa5.65□□□□□ -1.5
SMARCE1-210ENST00000481231 F8WDY8 70 aa5.65□□□□□ -1.5
SMARCE1-210ENST00000481231 TLX1NBP0CAT3 122 aa5.65□□□□□ -1.5
SMARCE1-210ENST00000481231 RPL32P62910 135 aaKnown RBP5.65□□□□□ -1.5
SMARCE1-210ENST00000481231 GAGE2EQ4V326 116 aa5.65□□□□□ -1.5
SMARCE1-210ENST00000481231 KRTAP7-1Q8IUC3 87 aa5.65□□□□□ -1.5
SMARCE1-210ENST00000481231 C20orf78Q9BR46 151 aa5.65□□□□□ -1.5
SMARCE1-210ENST00000481231 EIF5A2Q9GZV4 153 aaKnown RBP5.65□□□□□ -1.5
SMARCE1-210ENST00000481231 SMDT1Q9H4I9 107 aa5.65□□□□□ -1.5
SMARCE1-210ENST00000481231 SPANXA1Q9NS26 97 aa5.65□□□□□ -1.5
SMARCE1-210ENST00000481231 GAGE2DQ9UEU5 116 aa5.65□□□□□ -1.5
SMARCE1-210ENST00000481231 TRBV24-1A0A075B6N3 115 aa5.64□□□□□ -1.51
SMARCE1-210ENST00000481231 IFITM10A6NMD0 228 aa5.64□□□□□ -1.51
SMARCE1-210ENST00000481231 SRP19P09132 144 aaKnown RBP5.64□□□□□ -1.51
SMARCE1-210ENST00000481231 MRPS36P82909 103 aaKnown RBP5.64□□□□□ -1.51
SMARCE1-210ENST00000481231 SMIM2Q9BVW6 85 aa5.64□□□□□ -1.51
SMARCE1-210ENST00000481231 NAT8BQ9UHF3 227 aa5.64□□□□□ -1.51
SMARCE1-210ENST00000481231 LINC00862A6NCI5 91 aa5.63□□□□□ -1.51
SMARCE1-210ENST00000481231 M0QXV9 152 aa5.63□□□□□ -1.51
SMARCE1-210ENST00000481231 TCAPO15273 167 aa5.63□□□□□ -1.51
SMARCE1-210ENST00000481231 TNFRSF6BO95407 300 aa5.63□□□□□ -1.51
SMARCE1-210ENST00000481231 CKS2P33552 79 aa5.63□□□□□ -1.51
SMARCE1-210ENST00000481231 UBE2BP63146 152 aa5.63□□□□□ -1.51
SMARCE1-210ENST00000481231 HBBP68871 147 aa5.63□□□□□ -1.51
SMARCE1-210ENST00000481231 KIAA0087Q14695 138 aa5.63□□□□□ -1.51
SMARCE1-210ENST00000481231 TMEM241Q24JQ0 296 aa5.63□□□□□ -1.51
SMARCE1-210ENST00000481231 FAM74A3Q4VXF1 159 aa5.62□□□□□ -1.51
SMARCE1-210ENST00000481231 MUC17Q685J3 4493 aa5.62□□□□□ -1.51
SMARCE1-210ENST00000481231 TGIF2-C20orf24A0A0A6YYL0 155 aa5.61□□□□□ -1.51
SMARCE1-210ENST00000481231 A0A1B0GW15 77 aa5.61□□□□□ -1.51
SMARCE1-210ENST00000481231 SMIM27A0A1W2PRY6 76 aa5.61□□□□□ -1.51
SMARCE1-210ENST00000481231 D6R8Y8 96 aa5.61□□□□□ -1.51
SMARCE1-210ENST00000481231 RPL13AP40429 203 aaKnown RBP5.61□□□□□ -1.51
SMARCE1-210ENST00000481231 UBE2D1P51668 147 aa5.61□□□□□ -1.51
SMARCE1-210ENST00000481231 RPL23P62829 140 aaKnown RBP5.61□□□□□ -1.51
SMARCE1-210ENST00000481231 ADIRFQ15847 76 aa5.61□□□□□ -1.51
SMARCE1-210ENST00000481231 C9orf129Q5T035 196 aaKnown RBP5.61□□□□□ -1.51
SMARCE1-210ENST00000481231 C2orf82Q6UX34 121 aa5.61□□□□□ -1.51
SMARCE1-210ENST00000481231 TRBV30A0A0K0K1B3 111 aa5.6□□□□□ -1.51
SMARCE1-210ENST00000481231 NDUFC2-KCTD14E9PQ53 114 aa5.6□□□□□ -1.51
SMARCE1-210ENST00000481231 NPYP01303 97 aa5.6□□□□□ -1.51
SMARCE1-210ENST00000481231 LINC00242Q5T6M2 205 aa5.6□□□□□ -1.51
SMARCE1-210ENST00000481231 AKAP14Q86UN6 197 aa5.6□□□□□ -1.51
SMARCE1-210ENST00000481231 IGLV4-3A0A075B6K6 122 aa5.59□□□□□ -1.51
SMARCE1-210ENST00000481231 A0A1B0GXF2 115 aa5.59□□□□□ -1.51
SMARCE1-210ENST00000481231 A6NJY4 79 aa5.59□□□□□ -1.51
SMARCE1-210ENST00000481231 C9JQL5 133 aa5.59□□□□□ -1.51
SMARCE1-210ENST00000481231 SRSF3P84103 164 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-210ENST00000481231 MRPL54Q6P161 138 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-210ENST00000481231 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
SMARCE1-210ENST00000481231 F8W036 122 aa5.58□□□□□ -1.52
SMARCE1-210ENST00000481231 ZNF861PO60384 105 aa5.58□□□□□ -1.52
SMARCE1-210ENST00000481231 IFI27P40305 119 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-210ENST00000481231 PACRGQ96M98 296 aaPredicted RBP5.58□□□□□ -1.52
SMARCE1-210ENST00000481231 NAT8Q9UHE5 227 aa5.58□□□□□ -1.52
SMARCE1-210ENST00000481231 CARHSP1Q9Y2V2 147 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-210ENST00000481231 PYGO1Q9Y3Y4 419 aa5.58□□□□□ -1.52
SMARCE1-210ENST00000481231 TSPAN13O95857 204 aa5.57□□□□□ -1.52
SMARCE1-210ENST00000481231 PPBPP02775 128 aa5.57□□□□□ -1.52
SMARCE1-210ENST00000481231 S100A8P05109 93 aa5.57□□□□□ -1.52
SMARCE1-210ENST00000481231 RAB5AP20339 215 aa5.57□□□□□ -1.52
SMARCE1-210ENST00000481231 ZC2HC1BQ5TFG8 222 aa5.57□□□□□ -1.52
SMARCE1-210ENST00000481231 TMEM141Q96I45 108 aa5.57□□□□□ -1.52
SMARCE1-210ENST00000481231 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
SMARCE1-210ENST00000481231 TMEM136Q6ZRR5 245 aa5.56□□□□□ -1.52
SMARCE1-210ENST00000481231 ORMDL3Q8N138 153 aa5.56□□□□□ -1.52
SMARCE1-210ENST00000481231 LINC01561Q8N1V8 128 aa5.56□□□□□ -1.52
SMARCE1-210ENST00000481231 LINC00469Q8N7U9 141 aa5.56□□□□□ -1.52
SMARCE1-210ENST00000481231 A0A087X002 238 aa5.55□□□□□ -1.52
SMARCE1-210ENST00000481231 TEX43Q6ZNM6 134 aa5.55□□□□□ -1.52
SMARCE1-210ENST00000481231 LINC00173Q6ZV60 143 aa5.55□□□□□ -1.52
SMARCE1-210ENST00000481231 PRELID3AQ96N28 172 aa5.55□□□□□ -1.52
SMARCE1-210ENST00000481231 XAGE1AQ9HD64 81 aa5.55□□□□□ -1.52
SMARCE1-210ENST00000481231 C22orf24Q9Y442 160 aa5.55□□□□□ -1.52
SMARCE1-210ENST00000481231 NUPR1O60356 82 aa5.54□□□□□ -1.52
SMARCE1-210ENST00000481231 SMCPP49901 116 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-210ENST00000481231 LINC01547P58512 204 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-210ENST00000481231 CKS1BP61024 79 aa5.54□□□□□ -1.52
SMARCE1-210ENST00000481231 LBHQ53QV2 105 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-210ENST00000481231 C2orf88Q9BSF0 95 aa5.54□□□□□ -1.52
SMARCE1-210ENST00000481231 CTDSP1Q9GZU7 261 aa5.54□□□□□ -1.52
SMARCE1-210ENST00000481231 TOMM7Q9P0U1 55 aa5.54□□□□□ -1.52
SMARCE1-210ENST00000481231 LOC389332A0A1B0GUA5 103 aa5.53□□□□□ -1.52
SMARCE1-210ENST00000481231 PRSS2P07478 247 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms