RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 RPS10P5Q9NQ39 176 aa9.5□□□□□ -0.89
LIMS3-203ENST00000480744 CSDC2Q9Y534 153 aaKnown RBP9.5□□□□□ -0.89
LIMS3-203ENST00000480744 TNXBP22105 4242 aa9.49□□□□□ -0.89
LIMS3-203ENST00000480744 APOC3P02656 99 aa9.49□□□□□ -0.89
LIMS3-203ENST00000480744 SLC7A5P1Q8MH63 180 aa9.49□□□□□ -0.89
LIMS3-203ENST00000480744 TMEM18Q96B42 140 aa9.49□□□□□ -0.89
LIMS3-203ENST00000480744 LINC01600Q96MT4 127 aa9.49□□□□□ -0.89
LIMS3-203ENST00000480744 C20orf78Q9BR46 151 aa9.49□□□□□ -0.89
LIMS3-203ENST00000480744 SMIM2Q9BVW6 85 aa9.49□□□□□ -0.89
LIMS3-203ENST00000480744 TRAV9-1A0A075B6T8 112 aa9.48□□□□□ -0.89
LIMS3-203ENST00000480744 RPL32P62910 135 aaKnown RBP9.48□□□□□ -0.89
LIMS3-203ENST00000480744 SPINK6Q6UWN8 80 aa9.48□□□□□ -0.89
LIMS3-203ENST00000480744 Q6ZRP5 223 aa9.48□□□□□ -0.89
LIMS3-203ENST00000480744 ORMDL3Q8N138 153 aa9.48□□□□□ -0.89
LIMS3-203ENST00000480744 PRELID3AQ96N28 172 aa9.48□□□□□ -0.89
LIMS3-203ENST00000480744 APOMO95445 188 aa9.47□□□□□ -0.89
LIMS3-203ENST00000480744 PPBPP02775 128 aa9.47□□□□□ -0.89
LIMS3-203ENST00000480744 RPL18AQ02543 176 aaKnown RBP9.47□□□□□ -0.89
LIMS3-203ENST00000480744 ODF1Q14990 250 aa9.47□□□□□ -0.89
LIMS3-203ENST00000480744 REG3GQ6UW15 175 aa9.47□□□□□ -0.89
LIMS3-203ENST00000480744 RPL39P62891 51 aaKnown RBP9.46□□□□□ -0.9
LIMS3-203ENST00000480744 SPAG11BQ08648 103 aa9.46□□□□□ -0.9
LIMS3-203ENST00000480744 TIMM21Q9BVV7 248 aa9.46□□□□□ -0.9
LIMS3-203ENST00000480744 A0A0J9YXV3 536 aa9.45□□□□□ -0.9
LIMS3-203ENST00000480744 TCAPO15273 167 aa9.45□□□□□ -0.9
LIMS3-203ENST00000480744 S100PP25815 95 aa9.45□□□□□ -0.9
LIMS3-203ENST00000480744 KIAA1644Q3SXP7 199 aa9.45□□□□□ -0.9
LIMS3-203ENST00000480744 SVBPQ8N300 66 aa9.45□□□□□ -0.9
LIMS3-203ENST00000480744 C2orf48Q96LS8 159 aa9.45□□□□□ -0.9
LIMS3-203ENST00000480744 TGIF2-C20orf24A0A0A6YYL0 155 aa9.44□□□□□ -0.9
LIMS3-203ENST00000480744 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
LIMS3-203ENST00000480744 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.44□□□□□ -0.9
LIMS3-203ENST00000480744 OPRPNQ99935 248 aaPredicted RBP9.44□□□□□ -0.9
LIMS3-203ENST00000480744 PRSS47A8MTI9 375 aa9.43□□□□□ -0.9
LIMS3-203ENST00000480744 SNAPINO95295 136 aa9.43□□□□□ -0.9
LIMS3-203ENST00000480744 NDUFA5Q16718 116 aa9.43□□□□□ -0.9
LIMS3-203ENST00000480744 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
LIMS3-203ENST00000480744 ORAOV1Q8WV07 137 aa9.43□□□□□ -0.9
LIMS3-203ENST00000480744 LAMTOR2Q9Y2Q5 125 aa9.43□□□□□ -0.9
LIMS3-203ENST00000480744 LOC389332A0A1B0GUA5 103 aa9.42□□□□□ -0.9
LIMS3-203ENST00000480744 SRSF9Q13242 221 aaKnown RBP eCLIP9.42□□□□□ -0.9
LIMS3-203ENST00000480744 OR10D4PQ8NGN7 298 aa9.42□□□□□ -0.9
LIMS3-203ENST00000480744 FAM104AQ969W3 186 aa9.42□□□□□ -0.9
LIMS3-203ENST00000480744 YPEL4Q96NS1 127 aa9.42□□□□□ -0.9
LIMS3-203ENST00000480744 GNB1LQ9BYB4 327 aa9.42□□□□□ -0.9
LIMS3-203ENST00000480744 SPANXA1Q9NS26 97 aa9.42□□□□□ -0.9
LIMS3-203ENST00000480744 IFITM10A6NMD0 228 aa9.41□□□□□ -0.9
LIMS3-203ENST00000480744 MT-ND6P03923 174 aa9.41□□□□□ -0.9
LIMS3-203ENST00000480744 MAP1LC3AQ9H492 121 aa9.41□□□□□ -0.9
LIMS3-203ENST00000480744 KRTAP10-8P60410 259 aa9.4□□□□□ -0.9
LIMS3-203ENST00000480744 PHF5AQ7RTV0 110 aaKnown RBP9.4□□□□□ -0.9
LIMS3-203ENST00000480744 PSORS1C2Q9UIG4 136 aa9.4□□□□□ -0.9
LIMS3-203ENST00000480744 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
LIMS3-203ENST00000480744 RNF151Q2KHN1 245 aa9.39□□□□□ -0.91
LIMS3-203ENST00000480744 Q8N8P6 123 aa9.39□□□□□ -0.91
LIMS3-203ENST00000480744 MRPL18Q9H0U6 180 aaKnown RBP9.39□□□□□ -0.91
LIMS3-203ENST00000480744 LRP2P98164 4655 aa9.38□□□□□ -0.91
LIMS3-203ENST00000480744 IGHV3OR16-9A0A0B4J2B5 98 aa9.38□□□□□ -0.91
LIMS3-203ENST00000480744 NDUFA1O15239 70 aa9.38□□□□□ -0.91
LIMS3-203ENST00000480744 RAB5AP20339 215 aa9.38□□□□□ -0.91
LIMS3-203ENST00000480744 C1orf137Q5JT78 98 aa9.38□□□□□ -0.91
LIMS3-203ENST00000480744 CBLN2Q8IUK8 224 aa9.38□□□□□ -0.91
LIMS3-203ENST00000480744 ALKBH7Q9BT30 221 aaPredicted RBP9.38□□□□□ -0.91
LIMS3-203ENST00000480744 MRPL35Q9NZE8 188 aaKnown RBP9.38□□□□□ -0.91
LIMS3-203ENST00000480744 IFI27P40305 119 aaPredicted RBP9.37□□□□□ -0.91
LIMS3-203ENST00000480744 F8WDY8 70 aa9.36□□□□□ -0.91
LIMS3-203ENST00000480744 COX19Q49B96 90 aa9.36□□□□□ -0.91
LIMS3-203ENST00000480744 C10orf25Q5T742 122 aa9.36□□□□□ -0.91
LIMS3-203ENST00000480744 UNQ6190/PRO20217Q6UXQ8 127 aa9.36□□□□□ -0.91
LIMS3-203ENST00000480744 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
LIMS3-203ENST00000480744 FABP9Q0Z7S8 132 aa9.35□□□□□ -0.91
LIMS3-203ENST00000480744 FAM19A5Q7Z5A7 132 aaPredicted RBP9.35□□□□□ -0.91
LIMS3-203ENST00000480744 GAGE2EQ4V326 116 aa9.34□□□□□ -0.91
LIMS3-203ENST00000480744 NXT2Q9NPJ8 142 aaKnown RBP9.34□□□□□ -0.91
LIMS3-203ENST00000480744 C6orf48Q9UBA6 75 aa9.34□□□□□ -0.91
LIMS3-203ENST00000480744 GAGE2DQ9UEU5 116 aa9.34□□□□□ -0.91
LIMS3-203ENST00000480744 IGLV4-3A0A075B6K6 122 aa9.33□□□□□ -0.92
LIMS3-203ENST00000480744 A0A087WZ39 114 aa9.33□□□□□ -0.92
LIMS3-203ENST00000480744 TRAPPC1Q9Y5R8 145 aa9.33□□□□□ -0.92
LIMS3-203ENST00000480744 LINC01546A6NGU7 62 aa9.32□□□□□ -0.92
LIMS3-203ENST00000480744 LINC00242Q5T6M2 205 aa9.32□□□□□ -0.92
LIMS3-203ENST00000480744 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
LIMS3-203ENST00000480744 TMEM141Q96I45 108 aa9.32□□□□□ -0.92
LIMS3-203ENST00000480744 PYGO1Q9Y3Y4 419 aa9.32□□□□□ -0.92
LIMS3-203ENST00000480744 RNF213Q63HN8 5207 aa9.31□□□□□ -0.92
LIMS3-203ENST00000480744 IGLV7-43P04211 117 aa9.31□□□□□ -0.92
LIMS3-203ENST00000480744 TLX1NBP0CAT3 122 aa9.31□□□□□ -0.92
LIMS3-203ENST00000480744 ORMDL2Q53FV1 153 aa9.31□□□□□ -0.92
LIMS3-203ENST00000480744 TEX43Q6ZNM6 134 aa9.31□□□□□ -0.92
LIMS3-203ENST00000480744 URB1-AS1Q96HZ7 61 aa9.31□□□□□ -0.92
LIMS3-203ENST00000480744 SMCO4Q9NRQ5 59 aa9.31□□□□□ -0.92
LIMS3-203ENST00000480744 CYSLTR1Q9Y271 337 aa9.31□□□□□ -0.92
LIMS3-203ENST00000480744 K7EMI3 77 aa9.3□□□□□ -0.92
LIMS3-203ENST00000480744 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
LIMS3-203ENST00000480744 ZC2HC1BQ5TFG8 222 aa9.3□□□□□ -0.92
LIMS3-203ENST00000480744 C2orf82Q6UX34 121 aa9.3□□□□□ -0.92
LIMS3-203ENST00000480744 LINC00173Q6ZV60 143 aa9.3□□□□□ -0.92
LIMS3-203ENST00000480744 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
LIMS3-203ENST00000480744 C18orf32Q8TCD1 76 aa9.3□□□□□ -0.92
LIMS3-203ENST00000480744 DIRC1Q969H9 104 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms