RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 LSM3P62310 102 aaKnown RBP0.27□□□□□ -2.37
CALD1-219ENST00000480638 PLGLB1Q02325 96 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 ZNF56Q15929 161 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 SMIM21Q3B7S5 101 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 XAF1Q6GPH4 301 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 IDO2Q6ZQW0 420 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 SLC25A26Q70HW3 274 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 SNX29P2Q8IUI4 249 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 SPANXCQ9NY87 97 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 MRPL35Q9NZE8 188 aaKnown RBP0.27□□□□□ -2.37
CALD1-219ENST00000480638 FHAD1B1AJZ9 1412 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 NCOA3Q9Y6Q9 1424 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 ERICH3Q5RHP9 1530 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 ABCC8Q09428 1581 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 KIF1AQ12756 1690 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 ALS2Q96Q42 1657 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 MAP2P11137 1827 aaKnown RBP0.27□□□□□ -2.37
CALD1-219ENST00000480638 PTPRFP10586 1907 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 CITO14578 2027 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 MYO7AQ13402 2215 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 TRBV20-1A0A075B6N2 111 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 M0R2P5 195 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 SMR3BP02814 79 aaPredicted RBP0.26□□□□□ -2.37
CALD1-219ENST00000480638 CCKP06307 115 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 SLC25A6P12236 298 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 EVI2AP22794 236 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 CAV3P56539 151 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 MIC13Q5XKP0 118 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 ATP11AUNQ6ZP68 121 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 TSTD1Q8NFU3 115 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 ATP6V0E2Q8NHE4 81 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 LZICQ8WZA0 190 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 DMAC1Q96GE9 116 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 ATG5Q9H1Y0 275 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 NOP16Q9Y3C1 178 aaKnown RBP0.26□□□□□ -2.37
CALD1-219ENST00000480638 NFAT5O94916 1531 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 ABCC6O95255 1503 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 INO80Q9ULG1 1556 aaPredicted RBP0.26□□□□□ -2.37
CALD1-219ENST00000480638 MROH2AA6NES4 1674 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 MON2Q7Z3U7 1717 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 DOT1LQ8TEK3 1739 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 NWD2Q9ULI1 1742 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 TOGARAM1Q9Y4F4 1720 aa0.26□□□□□ -2.37
CALD1-219ENST00000480638 TANC2Q9HCD6 1990 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 ARFGEF1Q9Y6D6 1849 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 QSER1Q2KHR3 1735 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 KNDC1Q76NI1 1749 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 LMO7Q8WWI1 1683 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 MRC1P22897 1456 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 UACAQ9BZF9 1416 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 TRBV10-1A0A0K0K1A3 114 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 HIGD1CA8MV81 97 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 M0R2Z0 102 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 NPFFO15130 113 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 POLR2JP52435 117 aaKnown RBP0.25□□□□□ -2.37
CALD1-219ENST00000480638 SMCO1Q147U7 214 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 UNQ5815/PRO19632Q6UWF5 114 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 C10orf99Q6UWK7 81 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 Q6ZS92 163 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 ATOH7Q8N100 152 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 DEFB124Q8NES8 71 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 DYNLRB2Q8TF09 96 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 MAGOHBQ96A72 148 aaKnown RBP0.25□□□□□ -2.37
CALD1-219ENST00000480638 TAS2R8Q9NYW2 309 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 COPZ2Q9P299 210 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 ZGRF1Q86YA3 2104 aa0.25□□□□□ -2.37
CALD1-219ENST00000480638 KIAA1549LQ6ZVL6 1849 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 LOC285556D6RIA3 1793 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 MUC22E2RYF6 1773 aaPredicted RBP0.24□□□□□ -2.37
CALD1-219ENST00000480638 PARP4Q9UKK3 1724 aaKnown RBP0.24□□□□□ -2.37
CALD1-219ENST00000480638 SCN7AQ01118 1682 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 PTPN23Q9H3S7 1636 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 CCDC171Q6TFL3 1326 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 SPAARA0A1B0GVQ0 90 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 ZNF670-ZNF695F2Z2N8 137 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 J3QLW9 94 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 NDUFA2O43678 99 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 RBP4P02753 201 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 SPINT3P49223 89 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 NPC2P61916 151 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 NCS1P62166 190 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 RPS25P62851 125 aaKnown RBP0.24□□□□□ -2.37
CALD1-219ENST00000480638 SPINK9Q5DT21 86 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 C6orf52Q5T4I8 152 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 LINC01545Q5VT33 79 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 OR2T2Q6IF00 324 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 CTAGE3PQ8IX95 158 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 MMGT1Q8N4V1 131 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 PPDPFLQ8WWR9 84 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 IFI27L1Q96BM0 104 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 SDF2Q99470 211 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 FAM103A1Q9BTL3 118 aaKnown RBP0.24□□□□□ -2.37
CALD1-219ENST00000480638 NDUFA12Q9UI09 145 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 CHD3Q12873 2000 aaKnown RBP0.24□□□□□ -2.37
CALD1-219ENST00000480638 FANCMQ8IYD8 2048 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 CEP152O94986 1710 aa0.24□□□□□ -2.37
CALD1-219ENST00000480638 FYCO1Q9BQS8 1478 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 TROQ12816 1431 aaPredicted RBP0.23□□□□□ -2.37
CALD1-219ENST00000480638 NSD3Q9BZ95 1437 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 RRBP1Q9P2E9 1410 aaKnown RBP0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms