RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 C2orf88Q9BSF0 95 aa4.45□□□□□ -1.7
COL17A1-205ENST00000480127 SPANXA1Q9NS26 97 aa4.45□□□□□ -1.7
COL17A1-205ENST00000480127 UBE2D4Q9Y2X8 147 aa4.45□□□□□ -1.7
COL17A1-205ENST00000480127 A0A087WZ39 114 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 A0A0J9YXV3 536 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 LOC389332A0A1B0GUA5 103 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 SMIM27A0A1W2PRY6 76 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 PPBPP02775 128 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 RPL39P62891 51 aaKnown RBP4.44□□□□□ -1.7
COL17A1-205ENST00000480127 UBE2BP63146 152 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 GAGE2EQ4V326 116 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 C1orf137Q5JT78 98 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 SPINK6Q6UWN8 80 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 TMEM136Q6ZRR5 245 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 ORMDL3Q8N138 153 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 NRACQ8N912 160 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 OR10D4PQ8NGN7 298 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 PACRGQ96M98 296 aaPredicted RBP4.44□□□□□ -1.7
COL17A1-205ENST00000480127 LINC01600Q96MT4 127 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 PRELID3AQ96N28 172 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 SMIM2Q9BVW6 85 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 GAGE2DQ9UEU5 116 aa4.44□□□□□ -1.7
COL17A1-205ENST00000480127 CSDC2Q9Y534 153 aaKnown RBP4.44□□□□□ -1.7
COL17A1-205ENST00000480127 MT-ND4LP03901 98 aa4.43□□□□□ -1.7
COL17A1-205ENST00000480127 C9orf116Q5BN46 136 aaPredicted RBP4.43□□□□□ -1.7
COL17A1-205ENST00000480127 TEX43Q6ZNM6 134 aa4.43□□□□□ -1.7
COL17A1-205ENST00000480127 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
COL17A1-205ENST00000480127 C2orf48Q96LS8 159 aa4.43□□□□□ -1.7
COL17A1-205ENST00000480127 TIMM21Q9BVV7 248 aa4.43□□□□□ -1.7
COL17A1-205ENST00000480127 SMDT1Q9H4I9 107 aa4.43□□□□□ -1.7
COL17A1-205ENST00000480127 TOMM7Q9P0U1 55 aa4.43□□□□□ -1.7
COL17A1-205ENST00000480127 CKS1BP61024 79 aa4.42□□□□□ -1.7
COL17A1-205ENST00000480127 MAP1LC3AQ9H492 121 aa4.42□□□□□ -1.7
COL17A1-205ENST00000480127 TRBV24-1A0A075B6N3 115 aa4.41□□□□□ -1.7
COL17A1-205ENST00000480127 NPYP01303 97 aa4.41□□□□□ -1.7
COL17A1-205ENST00000480127 KRTAP10-8P60410 259 aa4.41□□□□□ -1.7
COL17A1-205ENST00000480127 ATP5L2Q7Z4Y8 100 aa4.41□□□□□ -1.7
COL17A1-205ENST00000480127 DIRC1Q969H9 104 aa4.41□□□□□ -1.7
COL17A1-205ENST00000480127 TMEM141Q96I45 108 aa4.41□□□□□ -1.7
COL17A1-205ENST00000480127 CTDSP1Q9GZU7 261 aa4.41□□□□□ -1.7
COL17A1-205ENST00000480127 VCX2Q9H322 139 aa4.41□□□□□ -1.7
COL17A1-205ENST00000480127 GEMIN7Q9H840 131 aaKnown RBP4.41□□□□□ -1.7
COL17A1-205ENST00000480127 CYSLTR1Q9Y271 337 aa4.41□□□□□ -1.7
COL17A1-205ENST00000480127 F8WDY8 70 aa4.4□□□□□ -1.71
COL17A1-205ENST00000480127 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.4□□□□□ -1.71
COL17A1-205ENST00000480127 G0S2P27469 103 aa4.4□□□□□ -1.71
COL17A1-205ENST00000480127 UBE2D1P51668 147 aa4.4□□□□□ -1.71
COL17A1-205ENST00000480127 RPL32P62910 135 aaKnown RBP4.4□□□□□ -1.71
COL17A1-205ENST00000480127 MRPS36P82909 103 aaKnown RBP4.4□□□□□ -1.71
COL17A1-205ENST00000480127 SRSF3P84103 164 aaKnown RBP4.4□□□□□ -1.71
COL17A1-205ENST00000480127 ORMDL2Q53FV1 153 aa4.4□□□□□ -1.71
COL17A1-205ENST00000480127 C6orf226Q5I0X4 101 aa4.4□□□□□ -1.71
COL17A1-205ENST00000480127 PAPPA-AS1Q5QFB9 102 aa4.4□□□□□ -1.71
COL17A1-205ENST00000480127 PHF5AQ7RTV0 110 aaKnown RBP4.4□□□□□ -1.71
COL17A1-205ENST00000480127 PSORS1C2Q9UIG4 136 aa4.4□□□□□ -1.71
COL17A1-205ENST00000480127 A0A1B0GVG6 124 aa4.39□□□□□ -1.71
COL17A1-205ENST00000480127 A0A1W2PNN7 141 aa4.39□□□□□ -1.71
COL17A1-205ENST00000480127 C9JQL5 133 aa4.39□□□□□ -1.71
COL17A1-205ENST00000480127 M0QXV9 152 aa4.39□□□□□ -1.71
COL17A1-205ENST00000480127 PNRC1Q12796 327 aaPredicted RBP4.39□□□□□ -1.71
COL17A1-205ENST00000480127 RNF151Q2KHN1 245 aa4.39□□□□□ -1.71
COL17A1-205ENST00000480127 UNQ6190/PRO20217Q6UXQ8 127 aa4.39□□□□□ -1.71
COL17A1-205ENST00000480127 MRPL35Q9NZE8 188 aaKnown RBP4.39□□□□□ -1.71
COL17A1-205ENST00000480127 LAMTOR2Q9Y2Q5 125 aa4.39□□□□□ -1.71
COL17A1-205ENST00000480127 S100PP25815 95 aa4.38□□□□□ -1.71
COL17A1-205ENST00000480127 SEC11AP67812 179 aa4.38□□□□□ -1.71
COL17A1-205ENST00000480127 C2orf66Q6UXQ4 117 aa4.38□□□□□ -1.71
COL17A1-205ENST00000480127 ANAPC16Q96DE5 110 aa4.38□□□□□ -1.71
COL17A1-205ENST00000480127 ALKBH7Q9BT30 221 aaPredicted RBP4.38□□□□□ -1.71
COL17A1-205ENST00000480127 IGLV4-3A0A075B6K6 122 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 IGHV3OR16-9A0A0B4J2B5 98 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 TRBV30A0A0K0K1B3 111 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 A0A1B0GXF2 115 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 FAM168BA1KXE4 195 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 C10orf25Q5T742 122 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 C2orf82Q6UX34 121 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 LINC00469Q8N7U9 141 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 Q8N8P6 123 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 NXT2Q9NPJ8 142 aaKnown RBP4.37□□□□□ -1.71
COL17A1-205ENST00000480127 C6orf48Q9UBA6 75 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 PYGO1Q9Y3Y4 419 aa4.37□□□□□ -1.71
COL17A1-205ENST00000480127 NDUFC2-KCTD14E9PQ53 114 aa4.36□□□□□ -1.71
COL17A1-205ENST00000480127 IGLV7-43P04211 117 aa4.36□□□□□ -1.71
COL17A1-205ENST00000480127 SRSF9Q13242 221 aaKnown RBP eCLIP4.36□□□□□ -1.71
COL17A1-205ENST00000480127 LINC00242Q5T6M2 205 aa4.36□□□□□ -1.71
COL17A1-205ENST00000480127 SMCO4Q9NRQ5 59 aa4.36□□□□□ -1.71
COL17A1-205ENST00000480127 NDUFA6P56556 154 aa4.35□□□□□ -1.71
COL17A1-205ENST00000480127 HERVK_113P63121 156 aa4.35□□□□□ -1.71
COL17A1-205ENST00000480127 LBHQ53QV2 105 aaPredicted RBP4.35□□□□□ -1.71
COL17A1-205ENST00000480127 SCGB3A1Q96QR1 104 aa4.35□□□□□ -1.71
COL17A1-205ENST00000480127 H0Y9J4 135 aa4.34□□□□□ -1.71
COL17A1-205ENST00000480127 K7EMI3 77 aa4.34□□□□□ -1.71
COL17A1-205ENST00000480127 RPL13AP40429 203 aaKnown RBP4.34□□□□□ -1.71
COL17A1-205ENST00000480127 KIAA1644Q3SXP7 199 aa4.34□□□□□ -1.71
COL17A1-205ENST00000480127 ZC2HC1BQ5TFG8 222 aa4.34□□□□□ -1.71
COL17A1-205ENST00000480127 FA2HQ7L5A8 372 aa4.34□□□□□ -1.71
COL17A1-205ENST00000480127 NKAPP1Q8N9T2 125 aa4.34□□□□□ -1.71
COL17A1-205ENST00000480127 XAGE1AQ9HD64 81 aa4.34□□□□□ -1.71
COL17A1-205ENST00000480127 LPAP08519 4548 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms