RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 GNG4P50150 75 aa5.64□□□□□ -1.51
GPNMB-211ENST00000479625 Q6ZUT4 128 aa5.64□□□□□ -1.51
GPNMB-211ENST00000479625 TYMSOSQ8TAI1 123 aa5.64□□□□□ -1.51
GPNMB-211ENST00000479625 IMMP2LQ96T52 175 aa5.64□□□□□ -1.51
GPNMB-211ENST00000479625 SMDT1Q9H4I9 107 aa5.64□□□□□ -1.51
GPNMB-211ENST00000479625 NDUFA1O15239 70 aa5.63□□□□□ -1.51
GPNMB-211ENST00000479625 ARPC5O15511 151 aa5.63□□□□□ -1.51
GPNMB-211ENST00000479625 TLX1NBP0CAT3 122 aa5.63□□□□□ -1.51
GPNMB-211ENST00000479625 LINC01547P58512 204 aaPredicted RBP5.63□□□□□ -1.51
GPNMB-211ENST00000479625 UNQ6190/PRO20217Q6UXQ8 127 aa5.63□□□□□ -1.51
GPNMB-211ENST00000479625 OR10D4PQ8NGN7 298 aa5.63□□□□□ -1.51
GPNMB-211ENST00000479625 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
GPNMB-211ENST00000479625 GNG13Q9P2W3 67 aa5.63□□□□□ -1.51
GPNMB-211ENST00000479625 CCL20P78556 96 aa5.62□□□□□ -1.51
GPNMB-211ENST00000479625 C9orf129Q5T035 196 aaKnown RBP5.62□□□□□ -1.51
GPNMB-211ENST00000479625 ST20Q9HBF5 79 aa5.62□□□□□ -1.51
GPNMB-211ENST00000479625 ANAPC11Q9NYG5 84 aa5.62□□□□□ -1.51
GPNMB-211ENST00000479625 NDUFA13Q9P0J0 144 aa5.62□□□□□ -1.51
GPNMB-211ENST00000479625 UBE2D4Q9Y2X8 147 aa5.62□□□□□ -1.51
GPNMB-211ENST00000479625 IGLV7-46A0A075B6I9 117 aa5.61□□□□□ -1.51
GPNMB-211ENST00000479625 KRTAP13-2Q52LG2 175 aa5.61□□□□□ -1.51
GPNMB-211ENST00000479625 TEX261Q6UWH6 196 aa5.61□□□□□ -1.51
GPNMB-211ENST00000479625 SMIM15Q7Z3B0 74 aa5.61□□□□□ -1.51
GPNMB-211ENST00000479625 SMIM12Q96EX1 92 aa5.61□□□□□ -1.51
GPNMB-211ENST00000479625 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
GPNMB-211ENST00000479625 CRYGAP11844 174 aa5.6□□□□□ -1.51
GPNMB-211ENST00000479625 POLR2KP53803 58 aaKnown RBP5.6□□□□□ -1.51
GPNMB-211ENST00000479625 CTDSP1Q9GZU7 261 aa5.6□□□□□ -1.51
GPNMB-211ENST00000479625 MANBALQ9NQG1 85 aa5.6□□□□□ -1.51
GPNMB-211ENST00000479625 TRBV27A0A0K0K1C4 114 aa5.59□□□□□ -1.51
GPNMB-211ENST00000479625 UMAD1C9J7I0 102 aa5.59□□□□□ -1.51
GPNMB-211ENST00000479625 K7EN84 100 aa5.59□□□□□ -1.51
GPNMB-211ENST00000479625 LINC00173Q6ZV60 143 aa5.59□□□□□ -1.51
GPNMB-211ENST00000479625 CSDC2Q9Y534 153 aaKnown RBP5.59□□□□□ -1.51
GPNMB-211ENST00000479625 IGHV3OR16-9A0A0B4J2B5 98 aa5.58□□□□□ -1.52
GPNMB-211ENST00000479625 SMKR1H3BMG3 65 aa5.58□□□□□ -1.52
GPNMB-211ENST00000479625 SMLR1H3BR10 107 aa5.58□□□□□ -1.52
GPNMB-211ENST00000479625 FCER1GP30273 86 aa5.58□□□□□ -1.52
GPNMB-211ENST00000479625 C2orf82Q6UX34 121 aa5.58□□□□□ -1.52
GPNMB-211ENST00000479625 LINC00304Q8N9R0 145 aa5.58□□□□□ -1.52
GPNMB-211ENST00000479625 F8WDY8 70 aa5.57□□□□□ -1.52
GPNMB-211ENST00000479625 NUPR1O60356 82 aa5.57□□□□□ -1.52
GPNMB-211ENST00000479625 TMEM241Q24JQ0 296 aa5.57□□□□□ -1.52
GPNMB-211ENST00000479625 LINC00242Q5T6M2 205 aa5.57□□□□□ -1.52
GPNMB-211ENST00000479625 PPDPFQ9H3Y8 114 aa5.57□□□□□ -1.52
GPNMB-211ENST00000479625 BIN3Q9NQY0 253 aa5.57□□□□□ -1.52
GPNMB-211ENST00000479625 MED9Q9NWA0 146 aa5.57□□□□□ -1.52
GPNMB-211ENST00000479625 NDUFC2-KCTD14E9PQ53 114 aa5.56□□□□□ -1.52
GPNMB-211ENST00000479625 KIAA0087Q14695 138 aa5.56□□□□□ -1.52
GPNMB-211ENST00000479625 LINC00469Q8N7U9 141 aa5.56□□□□□ -1.52
GPNMB-211ENST00000479625 FAM104AQ969W3 186 aa5.56□□□□□ -1.52
GPNMB-211ENST00000479625 C22orf24Q9Y442 160 aa5.56□□□□□ -1.52
GPNMB-211ENST00000479625 PDE6DO43924 150 aa5.55□□□□□ -1.52
GPNMB-211ENST00000479625 RPL28P46779 137 aaKnown RBP5.55□□□□□ -1.52
GPNMB-211ENST00000479625 RPL39P62891 51 aaKnown RBP5.55□□□□□ -1.52
GPNMB-211ENST00000479625 AMN1Q8IY45 258 aa5.55□□□□□ -1.52
GPNMB-211ENST00000479625 FAM210AQ96ND0 272 aa5.55□□□□□ -1.52
GPNMB-211ENST00000479625 TRBV30A0A0K0K1B3 111 aa5.54□□□□□ -1.52
GPNMB-211ENST00000479625 IFITM10A6NMD0 228 aa5.54□□□□□ -1.52
GPNMB-211ENST00000479625 BCE1O60756 84 aa5.54□□□□□ -1.52
GPNMB-211ENST00000479625 RAB4AP20338 218 aa5.54□□□□□ -1.52
GPNMB-211ENST00000479625 SMAGPQ0VAQ4 97 aa5.54□□□□□ -1.52
GPNMB-211ENST00000479625 OCC1Q8TAD7 63 aa5.54□□□□□ -1.52
GPNMB-211ENST00000479625 TIMM21Q9BVV7 248 aa5.54□□□□□ -1.52
GPNMB-211ENST00000479625 VCYO14598 125 aa5.53□□□□□ -1.52
GPNMB-211ENST00000479625 GATCO43716 136 aaKnown RBP5.53□□□□□ -1.52
GPNMB-211ENST00000479625 SUMO2P61956 95 aaKnown RBP5.53□□□□□ -1.52
GPNMB-211ENST00000479625 ZNF345Q14585 488 aa5.53□□□□□ -1.52
GPNMB-211ENST00000479625 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
GPNMB-211ENST00000479625 NRACQ8N912 160 aa5.53□□□□□ -1.52
GPNMB-211ENST00000479625 TMEM191AQ9H0A3 160 aa5.53□□□□□ -1.52
GPNMB-211ENST00000479625 XAGE1AQ9HD64 81 aa5.53□□□□□ -1.52
GPNMB-211ENST00000479625 PACRGQ96M98 296 aaPredicted RBP5.52□□□□□ -1.53
GPNMB-211ENST00000479625 KIR2DL4Q99706 377 aa5.52□□□□□ -1.53
GPNMB-211ENST00000479625 TGIF2-C20orf24A0A0A6YYL0 155 aa5.51□□□□□ -1.53
GPNMB-211ENST00000479625 KANTRA0A1W2PQU2 76 aa5.51□□□□□ -1.53
GPNMB-211ENST00000479625 RPL37AP8A6NKH3 93 aa5.51□□□□□ -1.53
GPNMB-211ENST00000479625 B5MCH6 92 aa5.51□□□□□ -1.53
GPNMB-211ENST00000479625 FAM229BQ4G0N7 80 aa5.51□□□□□ -1.53
GPNMB-211ENST00000479625 MRPL55Q7Z7F7 128 aaKnown RBP5.51□□□□□ -1.53
GPNMB-211ENST00000479625 KRTAP13-1Q8IUC0 172 aa5.51□□□□□ -1.53
GPNMB-211ENST00000479625 BORCS7Q96B45 105 aa5.51□□□□□ -1.53
GPNMB-211ENST00000479625 IGKV2D-26A0A0A0MRZ7 120 aa5.5□□□□□ -1.53
GPNMB-211ENST00000479625 A0A1B0GUT8 65 aa5.5□□□□□ -1.53
GPNMB-211ENST00000479625 ZNF727A8MUV8 499 aa5.5□□□□□ -1.53
GPNMB-211ENST00000479625 A8MWL6 223 aa5.5□□□□□ -1.53
GPNMB-211ENST00000479625 HBBP68871 147 aa5.5□□□□□ -1.53
GPNMB-211ENST00000479625 KRTAP13-3Q3SY46 172 aa5.5□□□□□ -1.53
GPNMB-211ENST00000479625 LBHQ53QV2 105 aaPredicted RBP5.5□□□□□ -1.53
GPNMB-211ENST00000479625 CT83Q5H943 113 aa5.5□□□□□ -1.53
GPNMB-211ENST00000479625 TMEM18Q96B42 140 aa5.5□□□□□ -1.53
GPNMB-211ENST00000479625 GAGE10A6NGK3 116 aa5.49□□□□□ -1.53
GPNMB-211ENST00000479625 HIGD1CA8MV81 97 aa5.49□□□□□ -1.53
GPNMB-211ENST00000479625 C3orf22Q8N5N4 141 aa5.49□□□□□ -1.53
GPNMB-211ENST00000479625 TEX46H3BTG2 121 aa5.48□□□□□ -1.53
GPNMB-211ENST00000479625 MRPS36P82909 103 aaKnown RBP5.48□□□□□ -1.53
GPNMB-211ENST00000479625 FAM231DQ6ZW35 169 aa5.48□□□□□ -1.53
GPNMB-211ENST00000479625 LINC00337Q8N6G1 96 aa5.48□□□□□ -1.53
GPNMB-211ENST00000479625 LINC00167Q96N53 147 aa5.48□□□□□ -1.53
GPNMB-211ENST00000479625 SPANXA1Q9NS26 97 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms