RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 SMKR1H3BMG3 65 aa10.03□□□□□ -0.8
HMGN1-212ENST00000479586 VCYO14598 125 aa10.03□□□□□ -0.8
HMGN1-212ENST00000479586 NDUFC2-KCTD14E9PQ53 114 aa10.02□□□□□ -0.81
HMGN1-212ENST00000479586 RAB4AP20338 218 aa10.02□□□□□ -0.81
HMGN1-212ENST00000479586 ZNF345Q14585 488 aa10.02□□□□□ -0.81
HMGN1-212ENST00000479586 KIAA0087Q14695 138 aa10.02□□□□□ -0.81
HMGN1-212ENST00000479586 LINC00173Q6ZV60 143 aa10.02□□□□□ -0.81
HMGN1-212ENST00000479586 OCC1Q8TAD7 63 aa10.02□□□□□ -0.81
HMGN1-212ENST00000479586 TIMM21Q9BVV7 248 aa10.02□□□□□ -0.81
HMGN1-212ENST00000479586 SRSF3P84103 164 aaKnown RBP10.01□□□□□ -0.81
HMGN1-212ENST00000479586 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
HMGN1-212ENST00000479586 AMN1Q8IY45 258 aa10.01□□□□□ -0.81
HMGN1-212ENST00000479586 LINC00304Q8N9R0 145 aa10.01□□□□□ -0.81
HMGN1-212ENST00000479586 FAM104AQ969W3 186 aa10.01□□□□□ -0.81
HMGN1-212ENST00000479586 RPL28P46779 137 aaKnown RBP10□□□□□ -0.81
HMGN1-212ENST00000479586 TMEM191AQ9H0A3 160 aa10□□□□□ -0.81
HMGN1-212ENST00000479586 C22orf24Q9Y442 160 aa10□□□□□ -0.81
HMGN1-212ENST00000479586 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
HMGN1-212ENST00000479586 GATCO43716 136 aaKnown RBP9.99□□□□□ -0.81
HMGN1-212ENST00000479586 KIR2DL4Q99706 377 aa9.99□□□□□ -0.81
HMGN1-212ENST00000479586 SUMO2P61956 95 aaKnown RBP9.98□□□□□ -0.81
HMGN1-212ENST00000479586 RPL39P62891 51 aaKnown RBP9.98□□□□□ -0.81
HMGN1-212ENST00000479586 NRACQ8N912 160 aa9.98□□□□□ -0.81
HMGN1-212ENST00000479586 PPDPFQ9H3Y8 114 aa9.98□□□□□ -0.81
HMGN1-212ENST00000479586 KANTRA0A1W2PQU2 76 aa9.97□□□□□ -0.81
HMGN1-212ENST00000479586 A8MWL6 223 aa9.97□□□□□ -0.81
HMGN1-212ENST00000479586 BCE1O60756 84 aa9.97□□□□□ -0.81
HMGN1-212ENST00000479586 LINC00242Q5T6M2 205 aa9.97□□□□□ -0.81
HMGN1-212ENST00000479586 LINC00469Q8N7U9 141 aa9.97□□□□□ -0.81
HMGN1-212ENST00000479586 TMEM18Q96B42 140 aa9.97□□□□□ -0.81
HMGN1-212ENST00000479586 BORCS7Q96B45 105 aa9.97□□□□□ -0.81
HMGN1-212ENST00000479586 KRTAP4-1Q9BYQ7 146 aa9.97□□□□□ -0.81
HMGN1-212ENST00000479586 IFITM10A6NMD0 228 aa9.96□□□□□ -0.82
HMGN1-212ENST00000479586 A0A1B0GUT8 65 aa9.95□□□□□ -0.82
HMGN1-212ENST00000479586 TEX46H3BTG2 121 aa9.95□□□□□ -0.82
HMGN1-212ENST00000479586 LBHQ53QV2 105 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-212ENST00000479586 PACRGQ96M98 296 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-212ENST00000479586 TGIF2-C20orf24A0A0A6YYL0 155 aa9.94□□□□□ -0.82
HMGN1-212ENST00000479586 HBBP68871 147 aa9.94□□□□□ -0.82
HMGN1-212ENST00000479586 FAM231DQ6ZW35 169 aa9.93□□□□□ -0.82
HMGN1-212ENST00000479586 XAGE1AQ9HD64 81 aa9.93□□□□□ -0.82
HMGN1-212ENST00000479586 HIGD1CA8MV81 97 aa9.92□□□□□ -0.82
HMGN1-212ENST00000479586 PPP1R17O96001 155 aa9.92□□□□□ -0.82
HMGN1-212ENST00000479586 CT83Q5H943 113 aa9.92□□□□□ -0.82
HMGN1-212ENST00000479586 SPANXA1Q9NS26 97 aa9.92□□□□□ -0.82
HMGN1-212ENST00000479586 ZNF727A8MUV8 499 aa9.91□□□□□ -0.82
HMGN1-212ENST00000479586 MRPS36P82909 103 aaKnown RBP9.91□□□□□ -0.82
HMGN1-212ENST00000479586 ASB16-AS1Q495Z4 193 aa9.91□□□□□ -0.82
HMGN1-212ENST00000479586 FAM229BQ4G0N7 80 aa9.91□□□□□ -0.82
HMGN1-212ENST00000479586 MRPL55Q7Z7F7 128 aaKnown RBP9.91□□□□□ -0.82
HMGN1-212ENST00000479586 HMSDA8MTL9 139 aa9.9□□□□□ -0.82
HMGN1-212ENST00000479586 PPP1R2P9O14990 202 aa9.9□□□□□ -0.82
HMGN1-212ENST00000479586 TP73-AS1Q9UF72 201 aa9.89□□□□□ -0.83
HMGN1-212ENST00000479586 RPL37AP8A6NKH3 93 aa9.88□□□□□ -0.83
HMGN1-212ENST00000479586 KRTAP13-1Q8IUC0 172 aa9.88□□□□□ -0.83
HMGN1-212ENST00000479586 IGKV2D-26A0A0A0MRZ7 120 aa9.87□□□□□ -0.83
HMGN1-212ENST00000479586 CTAG1AP78358 180 aa9.86□□□□□ -0.83
HMGN1-212ENST00000479586 MRPL51Q4U2R6 128 aaKnown RBP9.86□□□□□ -0.83
HMGN1-212ENST00000479586 LINC00337Q8N6G1 96 aa9.86□□□□□ -0.83
HMGN1-212ENST00000479586 LINC00167Q96N53 147 aa9.86□□□□□ -0.83
HMGN1-212ENST00000479586 TAGLN2P37802 199 aaKnown RBP9.85□□□□□ -0.83
HMGN1-212ENST00000479586 UBE2AP49459 152 aa9.85□□□□□ -0.83
HMGN1-212ENST00000479586 KRTAP13-3Q3SY46 172 aa9.85□□□□□ -0.83
HMGN1-212ENST00000479586 C20orf78Q9BR46 151 aa9.85□□□□□ -0.83
HMGN1-212ENST00000479586 GAGE10A6NGK3 116 aa9.84□□□□□ -0.83
HMGN1-212ENST00000479586 TCAPO15273 167 aa9.84□□□□□ -0.83
HMGN1-212ENST00000479586 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
HMGN1-212ENST00000479586 RIGQ13278 110 aa9.84□□□□□ -0.83
HMGN1-212ENST00000479586 TOMM7Q9P0U1 55 aa9.84□□□□□ -0.83
HMGN1-212ENST00000479586 PRSS2P07478 247 aa9.83□□□□□ -0.84
HMGN1-212ENST00000479586 CKS1BP61024 79 aa9.83□□□□□ -0.84
HMGN1-212ENST00000479586 LCE2CQ5TA81 110 aa9.83□□□□□ -0.84
HMGN1-212ENST00000479586 SMIM2Q9BVW6 85 aa9.83□□□□□ -0.84
HMGN1-212ENST00000479586 TRBV24-1A0A075B6N3 115 aa9.82□□□□□ -0.84
HMGN1-212ENST00000479586 FAM104BQ5XKR9 115 aa9.82□□□□□ -0.84
HMGN1-212ENST00000479586 FP248Q71RG6 208 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-212ENST00000479586 IGLV4-3A0A075B6K6 122 aa9.81□□□□□ -0.84
HMGN1-212ENST00000479586 TNFRSF6BO95407 300 aa9.81□□□□□ -0.84
HMGN1-212ENST00000479586 LINC01561Q8N1V8 128 aa9.81□□□□□ -0.84
HMGN1-212ENST00000479586 C3orf22Q8N5N4 141 aa9.81□□□□□ -0.84
HMGN1-212ENST00000479586 TMEM250H0YL14 139 aa9.8□□□□□ -0.84
HMGN1-212ENST00000479586 IFI27P40305 119 aaPredicted RBP9.8□□□□□ -0.84
HMGN1-212ENST00000479586 CEBPGP53567 150 aa9.8□□□□□ -0.84
HMGN1-212ENST00000479586 SEC61BP60468 96 aaKnown RBP9.8□□□□□ -0.84
HMGN1-212ENST00000479586 C6orf226Q5I0X4 101 aa9.8□□□□□ -0.84
HMGN1-212ENST00000479586 LINC00862A6NCI5 91 aa9.79□□□□□ -0.84
HMGN1-212ENST00000479586 CKS2P33552 79 aa9.79□□□□□ -0.84
HMGN1-212ENST00000479586 PNRC1Q12796 327 aaPredicted RBP9.78□□□□□ -0.84
HMGN1-212ENST00000479586 ZC2HC1BQ5TFG8 222 aa9.78□□□□□ -0.84
HMGN1-212ENST00000479586 Q6ZN92 141 aa9.78□□□□□ -0.84
HMGN1-212ENST00000479586 LINC01551Q86U37 167 aa9.78□□□□□ -0.84
HMGN1-212ENST00000479586 Q8IZM0 81 aa9.78□□□□□ -0.84
HMGN1-212ENST00000479586 OSTCQ9NRP0 149 aa9.78□□□□□ -0.84
HMGN1-212ENST00000479586 TMEM141Q96I45 108 aa9.77□□□□□ -0.85
HMGN1-212ENST00000479586 ALKBH7Q9BT30 221 aaPredicted RBP9.77□□□□□ -0.85
HMGN1-212ENST00000479586 PYGO1Q9Y3Y4 419 aa9.77□□□□□ -0.85
HMGN1-212ENST00000479586 V9GYV3 84 aa9.77□□□□□ -0.85
HMGN1-212ENST00000479586 NPYP01303 97 aa9.76□□□□□ -0.85
HMGN1-212ENST00000479586 PRLHP81277 87 aa9.76□□□□□ -0.85
HMGN1-212ENST00000479586 TEX43Q6ZNM6 134 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms