RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 ERICH3Q5RHP9 1530 aa0.08□□□□□ -2.4
CCDC58-204ENST00000479414 TANC1Q9C0D5 1861 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 DDX60LQ5H9U9 1706 aaKnown RBP0.07□□□□□ -2.4
CCDC58-204ENST00000479414 NALCNQ8IZF0 1738 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 DLEC1Q9Y238 1755 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 CLIP1P30622 1438 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 EIF2AK4Q9P2K8 1649 aaKnown RBP0.07□□□□□ -2.4
CCDC58-204ENST00000479414 BORCS7-ASMTA0A0B4J1R7 106 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 UQCRQO14949 82 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 TFF1P04155 84 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 CCKP06307 115 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 PSPHP78330 225 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 TFAMQ00059 246 aaKnown RBP0.07□□□□□ -2.4
CCDC58-204ENST00000479414 TOMM20LQ6UXN7 152 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 MAGOHBQ96A72 148 aaKnown RBP0.07□□□□□ -2.4
CCDC58-204ENST00000479414 BPESC1Q9GZL8 116 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 UHRF1BP1LA0JNW5 1464 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 FANCD2Q9BXW9 1451 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 SPAG17Q6Q759 2223 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 LMO7Q8WWI1 1683 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 TRPM2O94759 1503 aa0.07□□□□□ -2.4
CCDC58-204ENST00000479414 PATJQ8NI35 1801 aa0.06□□□□□ -2.4
CCDC58-204ENST00000479414 PTPRGP23470 1445 aa0.06□□□□□ -2.4
CCDC58-204ENST00000479414 PRG4Q92954 1404 aaPredicted RBP0.06□□□□□ -2.4
CCDC58-204ENST00000479414 UBR3Q6ZT12 1888 aa0.06□□□□□ -2.4
CCDC58-204ENST00000479414 TRAV17A0A0B4J275 112 aa0.06□□□□□ -2.4
CCDC58-204ENST00000479414 YPEL1O60688 119 aa0.06□□□□□ -2.4
CCDC58-204ENST00000479414 HIST1H1BP16401 226 aaKnown RBP0.06□□□□□ -2.4
CCDC58-204ENST00000479414 KRTAP20-2Q3LI61 65 aa0.06□□□□□ -2.4
CCDC58-204ENST00000479414 SPANXCQ9NY87 97 aa0.06□□□□□ -2.4
CCDC58-204ENST00000479414 CALML5Q9NZT1 146 aa0.06□□□□□ -2.4
CCDC58-204ENST00000479414 ABCC6O95255 1503 aa0.06□□□□□ -2.4
CCDC58-204ENST00000479414 ARHGAP5Q13017 1502 aa0.06□□□□□ -2.4
CCDC58-204ENST00000479414 MYO7AQ13402 2215 aa0.06□□□□□ -2.4
CCDC58-204ENST00000479414 INO80Q9ULG1 1556 aaPredicted RBP0.06□□□□□ -2.4
CCDC58-204ENST00000479414 NCOA3Q9Y6Q9 1424 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 FAM208AQ9UK61 1670 aaKnown RBP0.05□□□□□ -2.4
CCDC58-204ENST00000479414 ARHGAP35Q9NRY4 1499 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 SIPA1L3O60292 1781 aaPredicted RBP0.05□□□□□ -2.4
CCDC58-204ENST00000479414 AKAP12Q02952 1782 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 BCORQ6W2J9 1755 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 NFAT5O94916 1531 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 A0A0D9SFI3 127 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 APOC4-APOC2K7ER74 178 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 SMIM24O75264 130 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 RBP4P02753 201 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 COX4I1P13073 169 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 PCBD1P61457 104 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 CTAGE3PQ8IX95 158 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 TMEM35BQ8NCS4 154 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 PPDPFLQ8WWR9 84 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 SPANXA1Q9NS26 97 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 ERG28Q9UKR5 140 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 BTAF1O14981 1849 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 ABCA9Q8IUA7 1624 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 ARHGEF10O15013 1369 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 MED23Q9ULK4 1368 aa0.05□□□□□ -2.4
CCDC58-204ENST00000479414 TROQ12816 1431 aaPredicted RBP0.04□□□□□ -2.4
CCDC58-204ENST00000479414 A0A1B0GUL6 1792 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 WNK3Q9BYP7 1800 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 IQGAP2Q13576 1575 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 CFAP74Q9C0B2 1584 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 F5P12259 2224 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 A0A096LNT2 108 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 TRAV2A0A0B4J234 112 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 TRBV10-1A0A0K0K1A3 114 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 TCRBV3S1A0A5B6 114 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 A6NIN4 97 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 PIN1P1O15428 100 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 MPC1LP0DKB6 136 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 ADCYAP1P18509 176 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 OR4S1Q8NGB4 309 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 SPRR2FQ96RM1 72 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 TMEM242Q9NWH2 141 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 TAS2R8Q9NYW2 309 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 NDUFAF1Q9Y375 327 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 C4BP0C0L5 1744 aa0.04□□□□□ -2.4
CCDC58-204ENST00000479414 POLA1P09884 1462 aaPredicted RBP0.03□□□□□ -2.4
CCDC58-204ENST00000479414 MRC1P22897 1456 aa0.03□□□□□ -2.4
CCDC58-204ENST00000479414 SMR3BP02814 79 aaPredicted RBP0.03□□□□□ -2.4
CCDC58-204ENST00000479414 MT-ND4LP03901 98 aa0.03□□□□□ -2.4
CCDC58-204ENST00000479414 S100GP29377 79 aa0.03□□□□□ -2.4
CCDC58-204ENST00000479414 Q5VSD8 79 aa0.03□□□□□ -2.4
CCDC58-204ENST00000479414 SLC48A1Q6P1K1 146 aa0.03□□□□□ -2.4
CCDC58-204ENST00000479414 CYP2G1PQ6ZSU1 146 aa0.03□□□□□ -2.4
CCDC58-204ENST00000479414 NDUFA11Q86Y39 141 aa0.03□□□□□ -2.4
CCDC58-204ENST00000479414 DDA1Q9BW61 102 aa0.03□□□□□ -2.4
CCDC58-204ENST00000479414 NCOA2Q15596 1464 aa0.03□□□□□ -2.41
CCDC58-204ENST00000479414 ZNF518AQ6AHZ1 1483 aa0.03□□□□□ -2.41
CCDC58-204ENST00000479414 DUOX1Q9NRD9 1551 aa0.02□□□□□ -2.41
CCDC58-204ENST00000479414 PIK3C2BO00750 1634 aa0.02□□□□□ -2.41
CCDC58-204ENST00000479414 USF3Q68DE3 2245 aa0.02□□□□□ -2.41
CCDC58-204ENST00000479414 DOCK2Q92608 1830 aa0.02□□□□□ -2.41
CCDC58-204ENST00000479414 PLGLB1Q02325 96 aa0.02□□□□□ -2.41
CCDC58-204ENST00000479414 SSBP1Q04837 148 aaKnown RBP0.02□□□□□ -2.41
CCDC58-204ENST00000479414 RPL7L1Q6DKI1 246 aaKnown RBP0.02□□□□□ -2.41
CCDC58-204ENST00000479414 SMIM5Q71RC9 77 aa0.02□□□□□ -2.41
CCDC58-204ENST00000479414 SMIM11BQ8TCY0 68 aa0.02□□□□□ -2.41
CCDC58-204ENST00000479414 SKA2Q8WVK7 121 aaPredicted RBP0.02□□□□□ -2.41
CCDC58-204ENST00000479414 CNTLNQ9NXG0 1405 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms