RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 KRTAP10-4P60372 401 aaPredicted RBP13.14□□□□□ -0.31
TRIM8-203ENST00000479004 IGIPA6NJ69 53 aa13.13□□□□□ -0.31
TRIM8-203ENST00000479004 TMEM141Q96I45 108 aa13.13□□□□□ -0.31
TRIM8-203ENST00000479004 SCGB3A1Q96QR1 104 aa13.13□□□□□ -0.31
TRIM8-203ENST00000479004 TIMM17AQ99595 171 aa13.13□□□□□ -0.31
TRIM8-203ENST00000479004 IGLV4-3A0A075B6K6 122 aa13.12□□□□□ -0.31
TRIM8-203ENST00000479004 CCL25O15444 150 aa13.12□□□□□ -0.31
TRIM8-203ENST00000479004 HBDP02042 147 aa13.12□□□□□ -0.31
TRIM8-203ENST00000479004 CNBPP62633 177 aaKnown RBP13.12□□□□□ -0.31
TRIM8-203ENST00000479004 SS18Q15532 418 aa13.12□□□□□ -0.31
TRIM8-203ENST00000479004 RNASE13Q5GAN3 156 aaKnown RBP13.12□□□□□ -0.31
TRIM8-203ENST00000479004 PAPPA-AS1Q5QFB9 102 aa13.12□□□□□ -0.31
TRIM8-203ENST00000479004 Q6ZN92 141 aa13.12□□□□□ -0.31
TRIM8-203ENST00000479004 ERASQ7Z444 233 aa13.12□□□□□ -0.31
TRIM8-203ENST00000479004 FAM104AQ969W3 186 aa13.12□□□□□ -0.31
TRIM8-203ENST00000479004 OPRPNQ99935 248 aaPredicted RBP13.12□□□□□ -0.31
TRIM8-203ENST00000479004 LINC00959A0A1B0GUT2 108 aa13.11□□□□□ -0.31
TRIM8-203ENST00000479004 hDV102S1A0JD36 115 aa13.11□□□□□ -0.31
TRIM8-203ENST00000479004 SDIM1Q6ZPB5 146 aa13.11□□□□□ -0.31
TRIM8-203ENST00000479004 C1orf196B1AJZ1 125 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HIST1H2BKO60814 126 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HSBP1O75506 76 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HIST1H2BJP06899 126 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HIST1H2BOP23527 126 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HIST1H2BBP33778 126 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HIST1H2BDP58876 126 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HIST1H2BCP62807 126 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HIST2H2BEQ16778 126 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HIST1H2BHQ93079 126 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HIST1H2BNQ99877 126 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 HIST1H2BMQ99879 126 aa13.1□□□□□ -0.31
TRIM8-203ENST00000479004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.1□□□□□ -0.31
TRIM8-203ENST00000479004 A0A096LNJ9 63 aa13.09□□□□□ -0.31
TRIM8-203ENST00000479004 KRTAP29-1A8MX34 341 aaPredicted RBP13.09□□□□□ -0.31
TRIM8-203ENST00000479004 SLPIP03973 132 aa13.09□□□□□ -0.31
TRIM8-203ENST00000479004 TEX43Q6ZNM6 134 aa13.09□□□□□ -0.31
TRIM8-203ENST00000479004 CHCHD10Q8WYQ3 142 aaPredicted RBP13.09□□□□□ -0.31
TRIM8-203ENST00000479004 VCX2Q9H322 139 aa13.09□□□□□ -0.31
TRIM8-203ENST00000479004 TRAV13-1A0A0B4J241 112 aa13.08□□□□□ -0.32
TRIM8-203ENST00000479004 GAGE12HA6NDE8 117 aa13.08□□□□□ -0.32
TRIM8-203ENST00000479004 IFITM10A6NMD0 228 aa13.08□□□□□ -0.32
TRIM8-203ENST00000479004 PANO1I0J062 215 aa13.08□□□□□ -0.32
TRIM8-203ENST00000479004 J3QL48 77 aa13.08□□□□□ -0.32
TRIM8-203ENST00000479004 SERF1AO75920 110 aa13.08□□□□□ -0.32
TRIM8-203ENST00000479004 PMCHL1Q16048 86 aa13.08□□□□□ -0.32
TRIM8-203ENST00000479004 C2orf88Q9BSF0 95 aa13.08□□□□□ -0.32
TRIM8-203ENST00000479004 AMELXQ99217 191 aa13.07□□□□□ -0.32
TRIM8-203ENST00000479004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.06□□□□□ -0.32
TRIM8-203ENST00000479004 PDZD11Q5EBL8 140 aa13.06□□□□□ -0.32
TRIM8-203ENST00000479004 C15orf56Q8N910 161 aa13.06□□□□□ -0.32
TRIM8-203ENST00000479004 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.05□□□□□ -0.32
TRIM8-203ENST00000479004 ATP5LO75964 103 aa13.05□□□□□ -0.32
TRIM8-203ENST00000479004 XCL1P47992 114 aa13.05□□□□□ -0.32
TRIM8-203ENST00000479004 LINC00310P59036 64 aa13.05□□□□□ -0.32
TRIM8-203ENST00000479004 CFAP161Q6P656 301 aa13.05□□□□□ -0.32
TRIM8-203ENST00000479004 IGHV3-64A0A075B6Q5 118 aa13.04□□□□□ -0.32
TRIM8-203ENST00000479004 CIRBPQ14011 172 aaKnown RBP13.04□□□□□ -0.32
TRIM8-203ENST00000479004 CD164L2Q6UWJ8 174 aa13.04□□□□□ -0.32
TRIM8-203ENST00000479004 RPL37AP61513 92 aaKnown RBP13.03□□□□□ -0.32
TRIM8-203ENST00000479004 FOXI1Q12951 378 aa13.03□□□□□ -0.32
TRIM8-203ENST00000479004 LINC00173Q6ZV60 143 aa13.03□□□□□ -0.32
TRIM8-203ENST00000479004 FAM19A2Q8N3H0 131 aa13.02□□□□□ -0.33
TRIM8-203ENST00000479004 NUPR1O60356 82 aa13.01□□□□□ -0.33
TRIM8-203ENST00000479004 UBE2D1P51668 147 aa13.01□□□□□ -0.33
TRIM8-203ENST00000479004 PMVKQ15126 192 aa13.01□□□□□ -0.33
TRIM8-203ENST00000479004 ZC2HC1BQ5TFG8 222 aa13.01□□□□□ -0.33
TRIM8-203ENST00000479004 SEC11AP67812 179 aa12.99□□□□□ -0.33
TRIM8-203ENST00000479004 HIGD2BQ4VC39 106 aa12.99□□□□□ -0.33
TRIM8-203ENST00000479004 COA6Q5JTJ3 125 aaKnown RBP12.99□□□□□ -0.33
TRIM8-203ENST00000479004 LINC00242Q5T6M2 205 aa12.99□□□□□ -0.33
TRIM8-203ENST00000479004 CST9LQ9H4G1 147 aa12.99□□□□□ -0.33
TRIM8-203ENST00000479004 COX7A2LO14548 114 aa12.98□□□□□ -0.33
TRIM8-203ENST00000479004 LEPROTL1O95214 131 aa12.98□□□□□ -0.33
TRIM8-203ENST00000479004 CHTF8P0CG12 524 aa12.98□□□□□ -0.33
TRIM8-203ENST00000479004 NDUFA6P56556 154 aa12.98□□□□□ -0.33
TRIM8-203ENST00000479004 FAM19A3Q7Z5A8 133 aa12.98□□□□□ -0.33
TRIM8-203ENST00000479004 IFI27L1Q96BM0 104 aa12.98□□□□□ -0.33
TRIM8-203ENST00000479004 GVQW2A0A096LPI5 108 aaPredicted RBP12.97□□□□□ -0.33
TRIM8-203ENST00000479004 SPACA4Q8TDM5 124 aa12.97□□□□□ -0.33
TRIM8-203ENST00000479004 A0A087WYN8 130 aa12.96□□□□□ -0.33
TRIM8-203ENST00000479004 IGHV3OR16-9A0A0B4J2B5 98 aa12.96□□□□□ -0.33
TRIM8-203ENST00000479004 OXTP01178 125 aa12.96□□□□□ -0.33
TRIM8-203ENST00000479004 DPH3Q96FX2 82 aa12.96□□□□□ -0.33
TRIM8-203ENST00000479004 HSPB8Q9UJY1 196 aa12.96□□□□□ -0.33
TRIM8-203ENST00000479004 IGHV1-58A0A0C4DH39 117 aa12.95□□□□□ -0.34
TRIM8-203ENST00000479004 MALP21145 153 aa12.95□□□□□ -0.34
TRIM8-203ENST00000479004 HNRNPA3P51991 378 aaKnown RBP12.95□□□□□ -0.34
TRIM8-203ENST00000479004 COX6A2Q02221 97 aa12.95□□□□□ -0.34
TRIM8-203ENST00000479004 C5orf38Q86SI9 138 aa12.95□□□□□ -0.34
TRIM8-203ENST00000479004 HERVK_113P63121 156 aa12.94□□□□□ -0.34
TRIM8-203ENST00000479004 GEMIN7Q9H840 131 aaKnown RBP12.94□□□□□ -0.34
TRIM8-203ENST00000479004 HMCN2Q8NDA2 5059 aa12.94□□□□□ -0.34
TRIM8-203ENST00000479004 A0A0J9YXV3 536 aa12.93□□□□□ -0.34
TRIM8-203ENST00000479004 TINCRA0A1B0GVN0 87 aa12.93□□□□□ -0.34
TRIM8-203ENST00000479004 APOMO95445 188 aa12.93□□□□□ -0.34
TRIM8-203ENST00000479004 PACRGQ96M98 296 aaPredicted RBP12.93□□□□□ -0.34
TRIM8-203ENST00000479004 PLAC8Q9NZF1 115 aa12.93□□□□□ -0.34
TRIM8-203ENST00000479004 TRAV12-1A0A0B4J245 112 aa12.92□□□□□ -0.34
TRIM8-203ENST00000479004 FABP4P15090 132 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms