RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 COX8AP10176 69 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 CRYBA4P53673 196 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 FXYD3Q14802 87 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 PLGLAQ15195 96 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 TDRG1Q3Y452 100 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 PRR9Q5T870 116 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 C10orf113Q5VZT2 155 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 OR1L1Q8NH94 360 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 CIRBP-AS1Q8TBR5 109 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 MGST2Q99735 147 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 RNASE7Q9H1E1 156 aaKnown RBP2.61□□□□□ -1.99
CCDC171-207ENST00000478913 SPANXB1Q9NS25 103 aaPredicted RBP2.61□□□□□ -1.99
CCDC171-207ENST00000478913 OR2T8A6NH00 312 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 C17orf98A8MV24 154 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 HIGD1CA8MV81 97 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 F8W1H4 67 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 H3BUT2 72 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 K7EMT4 169 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 K7EN84 100 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 NPPCP23582 126 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 SPINK9Q5DT21 86 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 MIR17HGQ75NE6 70 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 C5orf17Q8NAS9 161 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 NUP35Q8NFH5 326 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 OR10X1Q8NGY0 326 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 MRAP2Q96G30 205 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 UBE2E2Q96LR5 201 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 ZNF714Q96N38 554 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 GPR82Q96P67 336 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 CCL13Q99616 98 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 FGF23Q9GZV9 251 aaPredicted RBP2.6□□□□□ -1.99
CCDC171-207ENST00000478913 ZNF492Q9P255 531 aa2.6□□□□□ -1.99
CCDC171-207ENST00000478913 TIMM8BQ9Y5J9 83 aaPredicted RBP2.6□□□□□ -1.99
CCDC171-207ENST00000478913 TRBV20OR9-2A0A075B6H5 130 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 IGHV3OR15-7A0A075B7D8 119 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 IGHV1-24A0A0C4DH33 117 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 A0A1B0GUT8 65 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 A0A1W2PPM0 123 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 NCBP2LA6PVI3 153 aaKnown RBP2.59□□□□□ -1.99
CCDC171-207ENST00000478913 GNG7O60262 68 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 CKS1BP61024 79 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 PRCDQ00LT1 54 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 EDDM3AQ14507 147 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 TAL2Q16559 108 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 VMA21Q3ZAQ7 101 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 EBLN2Q6P2I7 272 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 UNQ9165/PRO28630Q6UXU0 137 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 Q6ZRN7 208 aaPredicted RBP2.59□□□□□ -1.99
CCDC171-207ENST00000478913 OR1L8Q8NGR8 309 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 BLNKQ8WV28 456 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 RPEQ96AT9 228 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 IGF2BP2-AS1Q96M15 143 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 HES4Q9HCC6 221 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 IDI2-AS1Q9NZ38 188 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 CYSLTR1Q9Y271 337 aa2.59□□□□□ -1.99
CCDC171-207ENST00000478913 PGPA6NDG6 321 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 C2orf70A6NJV1 201 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 A8MUU9 505 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 IQCF6A8MYZ5 107 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 TMEM262E9PQX1 116 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 F2Z2F3 143 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 M0R2T5 61 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 HBDP02042 147 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 FOXA3P55318 350 aaPredicted RBP2.58□□□□□ -2
CCDC171-207ENST00000478913 RPL30P62888 115 aaKnown RBP2.58□□□□□ -2
CCDC171-207ENST00000478913 LTC4SQ16873 150 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 C12orf74Q32Q52 190 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 LINC01545Q5VT33 79 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 ORMDL3Q8N138 153 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 TTC9CQ8N5M4 171 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 FAM216BQ8N7L0 139 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 C11orf72Q8NBR9 251 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 OR8A1Q8NGG7 326 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 RAB37Q96AX2 223 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 SPANXDQ9BXN6 97 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 OTORQ9NRC9 128 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 TMEM14BQ9NUH8 114 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 MRPL16Q9NX20 251 aaKnown RBP2.58□□□□□ -2
CCDC171-207ENST00000478913 HIGD1BQ9P298 99 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 EPDR1Q9UM22 224 aa2.58□□□□□ -2
CCDC171-207ENST00000478913 IGHV3-43A0A0B4J1X8 118 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 TRAV8-6A0A0B4J262 113 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 A0A0J9YXV3 536 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 A0A1B0GXF2 115 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 hADV38S2A0JD32 116 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 GGTLC3B5MD39 225 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 F5H768 121 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 UPK2O00526 184 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 NDUFB3O43676 98 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 HLA-DRB4P13762 266 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 PSMB8P28062 276 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 CKS2P33552 79 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 ZNF137PP52743 207 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 SMAGPQ0VAQ4 97 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 RNASE13Q5GAN3 156 aaKnown RBP2.57□□□□□ -2
CCDC171-207ENST00000478913 SPATA31B1PQ5VZV4 182 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 Q6ZSA8 131 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 MYOZ3Q8TDC0 251 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 BAALCQ8WXS3 180 aa2.57□□□□□ -2
CCDC171-207ENST00000478913 PRELID3AQ96N28 172 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms