RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 NXT2Q9NPJ8 142 aaKnown RBP14.47□□□□□ -0.09
TRAF4-211ENST00000478021 A0A087WYN8 130 aa14.46□□□□□ -0.09
TRAF4-211ENST00000478021 KRTAP10-4P60372 401 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-211ENST00000478021 SYCNQ0VAF6 134 aa14.46□□□□□ -0.09
TRAF4-211ENST00000478021 ORMDL2Q53FV1 153 aa14.46□□□□□ -0.09
TRAF4-211ENST00000478021 TMEM141Q96I45 108 aa14.46□□□□□ -0.09
TRAF4-211ENST00000478021 FLG2Q5D862 2391 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-211ENST00000478021 A0A096LNI7 61 aa14.44□□□□□ -0.1
TRAF4-211ENST00000478021 APOMO95445 188 aa14.44□□□□□ -0.1
TRAF4-211ENST00000478021 APOC3P02656 99 aa14.44□□□□□ -0.1
TRAF4-211ENST00000478021 MAJINQ3KP22 176 aa14.44□□□□□ -0.1
TRAF4-211ENST00000478021 ZC2HC1BQ5TFG8 222 aa14.44□□□□□ -0.1
TRAF4-211ENST00000478021 IGHV3OR16-9A0A0B4J2B5 98 aa14.43□□□□□ -0.1
TRAF4-211ENST00000478021 RPL37AP61513 92 aaKnown RBP14.43□□□□□ -0.1
TRAF4-211ENST00000478021 SPAG11BQ08648 103 aa14.43□□□□□ -0.1
TRAF4-211ENST00000478021 Q6ZRU5 148 aa14.43□□□□□ -0.1
TRAF4-211ENST00000478021 K7EMI3 77 aa14.42□□□□□ -0.1
TRAF4-211ENST00000478021 TEX43Q6ZNM6 134 aa14.42□□□□□ -0.1
TRAF4-211ENST00000478021 CAMK2N2Q96S95 79 aa14.42□□□□□ -0.1
TRAF4-211ENST00000478021 MRPL18Q9H0U6 180 aaKnown RBP14.42□□□□□ -0.1
TRAF4-211ENST00000478021 COX19Q49B96 90 aa14.41□□□□□ -0.1
TRAF4-211ENST00000478021 ORAOV1Q8WV07 137 aa14.41□□□□□ -0.1
TRAF4-211ENST00000478021 ALKBH7Q9BT30 221 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-211ENST00000478021 TGIF2-C20orf24A0A0A6YYL0 155 aa14.4□□□□□ -0.1
TRAF4-211ENST00000478021 FABP9Q0Z7S8 132 aa14.4□□□□□ -0.1
TRAF4-211ENST00000478021 LINC00242Q5T6M2 205 aa14.4□□□□□ -0.1
TRAF4-211ENST00000478021 Q6ZN92 141 aa14.4□□□□□ -0.1
TRAF4-211ENST00000478021 LINC00173Q6ZV60 143 aa14.4□□□□□ -0.1
TRAF4-211ENST00000478021 PLAC8Q9NZF1 115 aa14.4□□□□□ -0.1
TRAF4-211ENST00000478021 IGIPA6NJ69 53 aa14.39□□□□□ -0.11
TRAF4-211ENST00000478021 MT-ND6P03923 174 aa14.39□□□□□ -0.11
TRAF4-211ENST00000478021 UBE2D1P51668 147 aa14.38□□□□□ -0.11
TRAF4-211ENST00000478021 NDUFA5Q16718 116 aa14.38□□□□□ -0.11
TRAF4-211ENST00000478021 STPG4Q8N801 248 aa14.38□□□□□ -0.11
TRAF4-211ENST00000478021 OR10D4PQ8NGN7 298 aa14.38□□□□□ -0.11
TRAF4-211ENST00000478021 C2orf48Q96LS8 159 aa14.38□□□□□ -0.11
TRAF4-211ENST00000478021 AMELXQ99217 191 aa14.38□□□□□ -0.11
TRAF4-211ENST00000478021 C2orf88Q9BSF0 95 aa14.38□□□□□ -0.11
TRAF4-211ENST00000478021 VCX2Q9H322 139 aa14.38□□□□□ -0.11
TRAF4-211ENST00000478021 PKIGQ9Y2B9 76 aa14.37□□□□□ -0.11
TRAF4-211ENST00000478021 SNAPINO95295 136 aa14.36□□□□□ -0.11
TRAF4-211ENST00000478021 SVBPQ8N300 66 aa14.36□□□□□ -0.11
TRAF4-211ENST00000478021 TOMM6Q96B49 74 aa14.36□□□□□ -0.11
TRAF4-211ENST00000478021 MYCBP2O75592 4640 aa14.36□□□□□ -0.11
TRAF4-211ENST00000478021 A0A0J9YXV3 536 aa14.35□□□□□ -0.11
TRAF4-211ENST00000478021 LOC107984640A0A0U1RRK4 108 aa14.35□□□□□ -0.11
TRAF4-211ENST00000478021 GAGE2BQ13066 116 aa14.35□□□□□ -0.11
TRAF4-211ENST00000478021 A0A087WZ39 114 aa14.34□□□□□ -0.11
TRAF4-211ENST00000478021 G0S2P27469 103 aa14.34□□□□□ -0.11
TRAF4-211ENST00000478021 NPSP0C0P6 89 aa14.33□□□□□ -0.12
TRAF4-211ENST00000478021 HNRNPA3P51991 378 aaKnown RBP14.33□□□□□ -0.12
TRAF4-211ENST00000478021 TIMM17AQ99595 171 aa14.33□□□□□ -0.12
TRAF4-211ENST00000478021 LINC00474Q9P2X8 69 aa14.33□□□□□ -0.12
TRAF4-211ENST00000478021 TRAPPC1Q9Y5R8 145 aa14.33□□□□□ -0.12
TRAF4-211ENST00000478021 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-211ENST00000478021 PTTG1IPP53801 180 aa14.32□□□□□ -0.12
TRAF4-211ENST00000478021 FA2HQ7L5A8 372 aa14.32□□□□□ -0.12
TRAF4-211ENST00000478021 SCGB3A1Q96QR1 104 aa14.32□□□□□ -0.12
TRAF4-211ENST00000478021 LINC01546A6NGU7 62 aa14.31□□□□□ -0.12
TRAF4-211ENST00000478021 RPL18AQ02543 176 aaKnown RBP14.31□□□□□ -0.12
TRAF4-211ENST00000478021 C10orf25Q5T742 122 aa14.31□□□□□ -0.12
TRAF4-211ENST00000478021 SMCO4Q9NRQ5 59 aa14.31□□□□□ -0.12
TRAF4-211ENST00000478021 NDUFA1O15239 70 aa14.3□□□□□ -0.12
TRAF4-211ENST00000478021 PAPPA-AS1Q5QFB9 102 aa14.3□□□□□ -0.12
TRAF4-211ENST00000478021 UNQ6190/PRO20217Q6UXQ8 127 aa14.3□□□□□ -0.12
TRAF4-211ENST00000478021 ERASQ7Z444 233 aa14.29□□□□□ -0.12
TRAF4-211ENST00000478021 C7orf33Q8WU49 177 aa14.29□□□□□ -0.12
TRAF4-211ENST00000478021 MRPL35Q9NZE8 188 aaKnown RBP14.29□□□□□ -0.12
TRAF4-211ENST00000478021 KIAA0087Q14695 138 aa14.28□□□□□ -0.12
TRAF4-211ENST00000478021 FAM19A3Q7Z5A8 133 aa14.28□□□□□ -0.12
TRAF4-211ENST00000478021 F8WDY8 70 aa14.27□□□□□ -0.13
TRAF4-211ENST00000478021 RNF151Q2KHN1 245 aa14.27□□□□□ -0.13
TRAF4-211ENST00000478021 PKHD1L1Q86WI1 4243 aa14.27□□□□□ -0.13
TRAF4-211ENST00000478021 J3QL48 77 aa14.26□□□□□ -0.13
TRAF4-211ENST00000478021 C18orf32Q8TCD1 76 aa14.26□□□□□ -0.13
TRAF4-211ENST00000478021 C6orf48Q9UBA6 75 aa14.26□□□□□ -0.13
TRAF4-211ENST00000478021 C2orf82Q6UX34 121 aa14.25□□□□□ -0.13
TRAF4-211ENST00000478021 LINC01561Q8N1V8 128 aa14.25□□□□□ -0.13
TRAF4-211ENST00000478021 DMBT1Q9UGM3 2413 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-211ENST00000478021 KRTAP29-1A8MX34 341 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-211ENST00000478021 HERVK_113P63121 156 aa14.24□□□□□ -0.13
TRAF4-211ENST00000478021 URB1-AS1Q96HZ7 61 aa14.24□□□□□ -0.13
TRAF4-211ENST00000478021 GEMIN7Q9H840 131 aaKnown RBP14.24□□□□□ -0.13
TRAF4-211ENST00000478021 TOMM7Q9P0U1 55 aa14.24□□□□□ -0.13
TRAF4-211ENST00000478021 CDKN2A-AS1Q9UH64 79 aa14.24□□□□□ -0.13
TRAF4-211ENST00000478021 A0A1W2PNN7 141 aa14.23□□□□□ -0.13
TRAF4-211ENST00000478021 LINC01549A6NIU2 74 aa14.23□□□□□ -0.13
TRAF4-211ENST00000478021 SEC11AP67812 179 aa14.23□□□□□ -0.13
TRAF4-211ENST00000478021 YPEL4Q96NS1 127 aa14.23□□□□□ -0.13
TRAF4-211ENST00000478021 PRSS2P07478 247 aa14.21□□□□□ -0.13
TRAF4-211ENST00000478021 C9orf116Q5BN46 136 aaPredicted RBP14.21□□□□□ -0.13
TRAF4-211ENST00000478021 PACRGQ96M98 296 aaPredicted RBP14.21□□□□□ -0.13
TRAF4-211ENST00000478021 A0A096LNJ9 63 aa14.2□□□□□ -0.14
TRAF4-211ENST00000478021 PMCHL1Q16048 86 aa14.2□□□□□ -0.14
TRAF4-211ENST00000478021 Q6ZRP5 223 aa14.2□□□□□ -0.14
TRAF4-211ENST00000478021 CBLN2Q8IUK8 224 aa14.2□□□□□ -0.14
TRAF4-211ENST00000478021 SLC7A5P1Q8MH63 180 aa14.2□□□□□ -0.14
TRAF4-211ENST00000478021 LINC00614P0C842 121 aa14.19□□□□□ -0.14
TRAF4-211ENST00000478021 PRR3P79522 188 aaKnown RBP14.19□□□□□ -0.14
TRAF4-211ENST00000478021 LINC00469Q8N7U9 141 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms