RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 MIR17HGQ75NE6 70 aa2.26□□□□□ -2.05
VPS50-214ENST00000477935 OR2D3Q8NGH3 330 aa2.26□□□□□ -2.05
VPS50-214ENST00000477935 CAMK2N2Q96S95 79 aa2.26□□□□□ -2.05
VPS50-214ENST00000477935 SLC25A21Q9BQT8 299 aaPredicted RBP2.26□□□□□ -2.05
VPS50-214ENST00000477935 MRPS26Q9BYN8 205 aaKnown RBP2.26□□□□□ -2.05
VPS50-214ENST00000477935 C11orf1Q9H5F2 150 aa2.26□□□□□ -2.05
VPS50-214ENST00000477935 UBE2D4Q9Y2X8 147 aa2.26□□□□□ -2.05
VPS50-214ENST00000477935 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
VPS50-214ENST00000477935 FAM25AB3EWG3 89 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 FAM25CB3EWG5 89 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 FAM25GB3EWG6 89 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 B4DEV8 164 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 H3BVH4 76 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 HPGDSO60760 199 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 SFT2D2O95562 160 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 XCL1P47992 114 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 TAS2R45P59539 299 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 UBE2L3P68036 154 aaKnown RBP2.25□□□□□ -2.05
VPS50-214ENST00000477935 BAXQ07812 192 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 TMEM241Q24JQ0 296 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 GCSAMLQ5JQS6 135 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 KCNIP2Q9NS61 270 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
VPS50-214ENST00000477935 KRBOX1C9JBD0 128 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 L7N2F9 121 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 M0QXV9 152 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 CCL25O15444 150 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 SPINK1P00995 79 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 KRTAP2-3P0C7H8 128 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 FGF7P21781 194 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 RPL12P30050 165 aaKnown RBP2.24□□□□□ -2.05
VPS50-214ENST00000477935 TMBIM6P55061 237 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 HBG1P69891 147 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 HBG2P69892 147 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 FLI1Q01543 452 aaPredicted RBP2.24□□□□□ -2.05
VPS50-214ENST00000477935 COX19Q49B96 90 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 KHDC3LQ587J8 217 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 PCOTHQ58A44 107 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 AMMECR1LQ6DCA0 310 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 FAM19A5Q7Z5A7 132 aaPredicted RBP2.24□□□□□ -2.05
VPS50-214ENST00000477935 FAM19A2Q8N3H0 131 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 NPCDR1Q9BY65 106 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 KRTAP2-4Q9BYR9 128 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 MRPL35Q9NZE8 188 aaKnown RBP2.24□□□□□ -2.05
VPS50-214ENST00000477935 GSKIPQ9P0R6 139 aa2.24□□□□□ -2.05
VPS50-214ENST00000477935 LINC00959A0A1B0GUT2 108 aa2.23□□□□□ -2.05
VPS50-214ENST00000477935 BCE1O60756 84 aa2.23□□□□□ -2.05
VPS50-214ENST00000477935 TCRAP04437 139 aa2.23□□□□□ -2.05
VPS50-214ENST00000477935 SMIM17P0DL12 118 aa2.23□□□□□ -2.05
VPS50-214ENST00000477935 ZNF25P17030 456 aaPredicted RBP2.23□□□□□ -2.05
VPS50-214ENST00000477935 SULT1A1P50225 295 aa2.23□□□□□ -2.05
VPS50-214ENST00000477935 BCAP31P51572 246 aa2.23□□□□□ -2.05
VPS50-214ENST00000477935 COTL1Q14019 142 aa2.23□□□□□ -2.05
VPS50-214ENST00000477935 C5orf17Q8NAS9 161 aa2.23□□□□□ -2.05
VPS50-214ENST00000477935 SMIM4Q8WVI0 70 aa2.23□□□□□ -2.05
VPS50-214ENST00000477935 ZNF471Q9BX82 626 aaPredicted RBP2.23□□□□□ -2.05
VPS50-214ENST00000477935 MCUBQ9NWR8 336 aa2.23□□□□□ -2.05
VPS50-214ENST00000477935 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 UBE2L5PA0A1B0GUS4 154 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 ANKRD20A5PA0PJZ0 165 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 GRIFINA4D1Z8 144 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 C17orf112F2Z3M2 114 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 G3V3Q6 166 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 M0QY20 66 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 COX7A2LO14548 114 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 CST7O76096 145 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 PVALBP20472 110 aaPredicted RBP2.22□□□□□ -2.05
VPS50-214ENST00000477935 FAUP35544 74 aaKnown RBP2.22□□□□□ -2.05
VPS50-214ENST00000477935 PPP1R1AQ13522 171 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 STX12Q86Y82 276 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 BTF3L4Q96K17 158 aa2.22□□□□□ -2.05
VPS50-214ENST00000477935 TMEM223A0PJW6 202 aa2.21□□□□□ -2.06
VPS50-214ENST00000477935 XKRY2A2RUG3 117 aa2.21□□□□□ -2.06
VPS50-214ENST00000477935 C1orf196B1AJZ1 125 aa2.21□□□□□ -2.06
VPS50-214ENST00000477935 M0R036 132 aa2.21□□□□□ -2.06
VPS50-214ENST00000477935 NCR2O95944 276 aa2.21□□□□□ -2.06
VPS50-214ENST00000477935 GNG5P63218 68 aa2.21□□□□□ -2.06
VPS50-214ENST00000477935 ZNF726P1Q15940 193 aa2.21□□□□□ -2.06
VPS50-214ENST00000477935 FAM210AQ96ND0 272 aa2.21□□□□□ -2.06
VPS50-214ENST00000477935 SMDT1Q9H4I9 107 aa2.21□□□□□ -2.06
VPS50-214ENST00000477935 NIT2Q9NQR4 276 aa2.21□□□□□ -2.06
VPS50-214ENST00000477935 EPDR1Q9UM22 224 aa2.21□□□□□ -2.06
VPS50-214ENST00000477935 C9orf170A2RU37 121 aa2.2□□□□□ -2.06
VPS50-214ENST00000477935 NDUFA1O15239 70 aa2.2□□□□□ -2.06
VPS50-214ENST00000477935 SLC25A20O43772 301 aa2.2□□□□□ -2.06
VPS50-214ENST00000477935 TGFBR1P36897 503 aa2.2□□□□□ -2.06
VPS50-214ENST00000477935 NKX2-5P52952 324 aaPredicted RBP2.2□□□□□ -2.06
VPS50-214ENST00000477935 AQP4P55087 323 aa2.2□□□□□ -2.06
VPS50-214ENST00000477935 RPS29P62273 56 aaKnown RBP2.2□□□□□ -2.06
VPS50-214ENST00000477935 SPANXN1Q5VSR9 72 aa2.2□□□□□ -2.06
VPS50-214ENST00000477935 RASL11AQ6T310 242 aa2.2□□□□□ -2.06
VPS50-214ENST00000477935 OR10D4PQ8NGN7 298 aa2.2□□□□□ -2.06
VPS50-214ENST00000477935 MCFD2Q8NI22 146 aa2.2□□□□□ -2.06
VPS50-214ENST00000477935 ZFP30Q9Y2G7 519 aa2.2□□□□□ -2.06
VPS50-214ENST00000477935 C22orf24Q9Y442 160 aa2.2□□□□□ -2.06
VPS50-214ENST00000477935 A0A1W2PPV4 95 aa2.19□□□□□ -2.06
VPS50-214ENST00000477935 H0Y8G0 127 aa2.19□□□□□ -2.06
VPS50-214ENST00000477935 CXCL1P09341 107 aa2.19□□□□□ -2.06
VPS50-214ENST00000477935 OR5AL1P0C617 328 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms