RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 LINC00337Q8N6G1 96 aa3.48□□□□□ -1.85
LINC00173-202ENST00000477702 OR10AG1Q8NH19 301 aa3.48□□□□□ -1.85
LINC00173-202ENST00000477702 AP1S3Q96PC3 154 aa3.48□□□□□ -1.85
LINC00173-202ENST00000477702 ANAPC11Q9NYG5 84 aa3.48□□□□□ -1.85
LINC00173-202ENST00000477702 UMAD1C9J7I0 102 aa3.47□□□□□ -1.85
LINC00173-202ENST00000477702 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.47□□□□□ -1.85
LINC00173-202ENST00000477702 APOMO95445 188 aa3.47□□□□□ -1.85
LINC00173-202ENST00000477702 CXCL1P09341 107 aa3.47□□□□□ -1.85
LINC00173-202ENST00000477702 NKX2-5P52952 324 aaPredicted RBP3.47□□□□□ -1.85
LINC00173-202ENST00000477702 RPS20P60866 119 aaKnown RBP3.47□□□□□ -1.85
LINC00173-202ENST00000477702 MEF2BQ02080 365 aaPredicted RBP3.47□□□□□ -1.85
LINC00173-202ENST00000477702 KRTAP19-2Q3LHN2 52 aa3.47□□□□□ -1.85
LINC00173-202ENST00000477702 SFT2D1Q8WV19 159 aa3.47□□□□□ -1.85
LINC00173-202ENST00000477702 TPPP3Q9BW30 176 aa3.47□□□□□ -1.85
LINC00173-202ENST00000477702 BIN3Q9NQY0 253 aa3.47□□□□□ -1.85
LINC00173-202ENST00000477702 IGLV4-69A0A075B6H9 119 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 F2Z2F3 143 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 CCL25O15444 150 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 MGPP08493 103 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 OR5AL1P0C617 328 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 TRGC1P0CF51 173 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 UBE2BP63146 152 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 TMUB2Q71RG4 321 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 SMIM15Q7Z3B0 74 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 Q8N377 158 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 KCNRGQ8N5I3 272 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 LINC00304Q8N9R0 145 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 NUP35Q8NFH5 326 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 OR5A1Q8NGJ0 315 aa3.46□□□□□ -1.86
LINC00173-202ENST00000477702 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
LINC00173-202ENST00000477702 KANTRA0A1W2PQU2 76 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 M0QY20 66 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 M0R2T5 61 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 ARPC5O15511 151 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 COTL1Q14019 142 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 ZNF726P1Q15940 193 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 KRTAP13-2Q52LG2 175 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 AMMECR1LQ6DCA0 310 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 RNASEKQ6P5S7 137 aaKnown RBP3.45□□□□□ -1.86
LINC00173-202ENST00000477702 FAM213BQ8TBF2 198 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 TSKUQ8WUA8 353 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 ISOC2Q96AB3 205 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 CAMK2N2Q96S95 79 aa3.45□□□□□ -1.86
LINC00173-202ENST00000477702 A0A1B0GV50 99 aa3.44□□□□□ -1.86
LINC00173-202ENST00000477702 BCL2L11O43521 198 aa3.44□□□□□ -1.86
LINC00173-202ENST00000477702 SNAI2O43623 268 aa3.44□□□□□ -1.86
LINC00173-202ENST00000477702 ZNF861PO60384 105 aa3.44□□□□□ -1.86
LINC00173-202ENST00000477702 IFNA1P01562 189 aa3.44□□□□□ -1.86
LINC00173-202ENST00000477702 NDUFV3P56181 108 aaKnown RBP3.44□□□□□ -1.86
LINC00173-202ENST00000477702 KRTAP13-3Q3SY46 172 aa3.44□□□□□ -1.86
LINC00173-202ENST00000477702 RASL11AQ6T310 242 aa3.44□□□□□ -1.86
LINC00173-202ENST00000477702 TEX261Q6UWH6 196 aa3.44□□□□□ -1.86
LINC00173-202ENST00000477702 MANBALQ9NQG1 85 aa3.44□□□□□ -1.86
LINC00173-202ENST00000477702 NIT2Q9NQR4 276 aa3.44□□□□□ -1.86
LINC00173-202ENST00000477702 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.43□□□□□ -1.86
LINC00173-202ENST00000477702 LINC00959A0A1B0GUT2 108 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 IGKV2-29A2NJV5 120 aaPredicted RBP3.43□□□□□ -1.86
LINC00173-202ENST00000477702 M0QXV9 152 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 PDE6DO43924 150 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 S100A1P23297 94 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 RPL35P42766 123 aaKnown RBP3.43□□□□□ -1.86
LINC00173-202ENST00000477702 GNG4P50150 75 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 Q5BKY6 102 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 OR2D3Q8NGH3 330 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 MBD3L1Q8WWY6 194 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 C11orf52Q96A22 123 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 SMIM12Q96EX1 92 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 TMEM101Q96IK0 257 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 BTF3L4Q96K17 158 aa3.43□□□□□ -1.86
LINC00173-202ENST00000477702 IGLV4-3A0A075B6K6 122 aa3.42□□□□□ -1.86
LINC00173-202ENST00000477702 SMAGPQ0VAQ4 97 aa3.42□□□□□ -1.86
LINC00173-202ENST00000477702 ZNF345Q14585 488 aa3.42□□□□□ -1.86
LINC00173-202ENST00000477702 RGS21Q2M5E4 152 aa3.42□□□□□ -1.86
LINC00173-202ENST00000477702 LINC00469Q8N7U9 141 aa3.42□□□□□ -1.86
LINC00173-202ENST00000477702 PGLYRP4Q96LB8 373 aa3.42□□□□□ -1.86
LINC00173-202ENST00000477702 GNG13Q9P2W3 67 aa3.42□□□□□ -1.86
LINC00173-202ENST00000477702 C19orf71A6NCJ1 209 aa3.41□□□□□ -1.86
LINC00173-202ENST00000477702 HMSDA8MTL9 139 aa3.41□□□□□ -1.86
LINC00173-202ENST00000477702 NCR2O95944 276 aa3.41□□□□□ -1.86
LINC00173-202ENST00000477702 NTF3P20783 257 aa3.41□□□□□ -1.86
LINC00173-202ENST00000477702 TAGLN2P37802 199 aaKnown RBP3.41□□□□□ -1.86
LINC00173-202ENST00000477702 DSCR10P59022 87 aa3.41□□□□□ -1.86
LINC00173-202ENST00000477702 CENPWQ5EE01 88 aa3.41□□□□□ -1.86
LINC00173-202ENST00000477702 CD164L2Q6UWJ8 174 aa3.41□□□□□ -1.86
LINC00173-202ENST00000477702 BORCS7Q96B45 105 aa3.41□□□□□ -1.86
LINC00173-202ENST00000477702 MED9Q9NWA0 146 aa3.41□□□□□ -1.86
LINC00173-202ENST00000477702 COX7A2LO14548 114 aa3.4□□□□□ -1.87
LINC00173-202ENST00000477702 APCSP02743 223 aa3.4□□□□□ -1.87
LINC00173-202ENST00000477702 ZNF25P17030 456 aaPredicted RBP3.4□□□□□ -1.87
LINC00173-202ENST00000477702 PMCHP20382 165 aa3.4□□□□□ -1.87
LINC00173-202ENST00000477702 CCL20P78556 96 aa3.4□□□□□ -1.87
LINC00173-202ENST00000477702 SS18Q15532 418 aa3.4□□□□□ -1.87
LINC00173-202ENST00000477702 LYZL1Q6UWQ5 148 aa3.4□□□□□ -1.87
LINC00173-202ENST00000477702 C9orf62Q8N4C0 152 aa3.4□□□□□ -1.87
LINC00173-202ENST00000477702 CYTL1Q9NRR1 136 aa3.4□□□□□ -1.87
LINC00173-202ENST00000477702 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
LINC00173-202ENST00000477702 KRTAP4-16G5E9R7 235 aaPredicted RBP3.39□□□□□ -1.87
LINC00173-202ENST00000477702 S100A6P06703 90 aa3.39□□□□□ -1.87
LINC00173-202ENST00000477702 IGLC6P0CF74 106 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms