RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 RAB5AP20339 215 aa9.78□□□□□ -0.84
COMMD6-209ENST00000477377 MAJINQ3KP22 176 aa9.78□□□□□ -0.84
COMMD6-209ENST00000477377 COMMD7Q86VX2 200 aa9.78□□□□□ -0.84
COMMD6-209ENST00000477377 MAP1LC3AQ9H492 121 aa9.78□□□□□ -0.84
COMMD6-209ENST00000477377 MALP21145 153 aa9.77□□□□□ -0.85
COMMD6-209ENST00000477377 KIAA1644Q3SXP7 199 aa9.77□□□□□ -0.85
COMMD6-209ENST00000477377 DPH3Q96FX2 82 aa9.77□□□□□ -0.85
COMMD6-209ENST00000477377 IFI27P40305 119 aaPredicted RBP9.76□□□□□ -0.85
COMMD6-209ENST00000477377 LINC00242Q5T6M2 205 aa9.76□□□□□ -0.85
COMMD6-209ENST00000477377 LINC00173Q6ZV60 143 aa9.76□□□□□ -0.85
COMMD6-209ENST00000477377 C2orf48Q96LS8 159 aa9.76□□□□□ -0.85
COMMD6-209ENST00000477377 TRAV9-1A0A075B6T8 112 aa9.75□□□□□ -0.85
COMMD6-209ENST00000477377 IGIPA6NJ69 53 aa9.75□□□□□ -0.85
COMMD6-209ENST00000477377 ZC2HC1BQ5TFG8 222 aa9.75□□□□□ -0.85
COMMD6-209ENST00000477377 C2orf66Q6UXQ4 117 aa9.75□□□□□ -0.85
COMMD6-209ENST00000477377 STPG4Q8N801 248 aa9.75□□□□□ -0.85
COMMD6-209ENST00000477377 AMELXQ99217 191 aa9.75□□□□□ -0.85
COMMD6-209ENST00000477377 IFITM10A6NMD0 228 aa9.74□□□□□ -0.85
COMMD6-209ENST00000477377 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.74□□□□□ -0.85
COMMD6-209ENST00000477377 TMEM141Q96I45 108 aa9.74□□□□□ -0.85
COMMD6-209ENST00000477377 CARHSP1Q9Y2V2 147 aaKnown RBP9.74□□□□□ -0.85
COMMD6-209ENST00000477377 HMCN2Q8NDA2 5059 aa9.74□□□□□ -0.85
COMMD6-209ENST00000477377 UBE2D1P51668 147 aa9.73□□□□□ -0.85
COMMD6-209ENST00000477377 PTTG1IPP53801 180 aa9.73□□□□□ -0.85
COMMD6-209ENST00000477377 SPAG11BQ08648 103 aa9.73□□□□□ -0.85
COMMD6-209ENST00000477377 KIAA0087Q14695 138 aa9.73□□□□□ -0.85
COMMD6-209ENST00000477377 OR10D4PQ8NGN7 298 aa9.73□□□□□ -0.85
COMMD6-209ENST00000477377 CAMK2N2Q96S95 79 aa9.73□□□□□ -0.85
COMMD6-209ENST00000477377 A0A087WZ39 114 aa9.72□□□□□ -0.85
COMMD6-209ENST00000477377 J3QL48 77 aa9.72□□□□□ -0.85
COMMD6-209ENST00000477377 K7EMI3 77 aa9.72□□□□□ -0.85
COMMD6-209ENST00000477377 APOMO95445 188 aa9.72□□□□□ -0.85
COMMD6-209ENST00000477377 OXTP01178 125 aa9.72□□□□□ -0.85
COMMD6-209ENST00000477377 ORMDL2Q53FV1 153 aa9.72□□□□□ -0.85
COMMD6-209ENST00000477377 C10orf25Q5T742 122 aa9.72□□□□□ -0.85
COMMD6-209ENST00000477377 GNB1LQ9BYB4 327 aa9.72□□□□□ -0.85
COMMD6-209ENST00000477377 NXT2Q9NPJ8 142 aaKnown RBP9.72□□□□□ -0.85
COMMD6-209ENST00000477377 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
COMMD6-209ENST00000477377 A0A0J9YXV3 536 aa9.71□□□□□ -0.86
COMMD6-209ENST00000477377 A0A1W2PNN7 141 aa9.71□□□□□ -0.86
COMMD6-209ENST00000477377 LINC01546A6NGU7 62 aa9.71□□□□□ -0.86
COMMD6-209ENST00000477377 RNF151Q2KHN1 245 aa9.71□□□□□ -0.86
COMMD6-209ENST00000477377 ORAOV1Q8WV07 137 aa9.71□□□□□ -0.86
COMMD6-209ENST00000477377 ALKBH7Q9BT30 221 aaPredicted RBP9.71□□□□□ -0.86
COMMD6-209ENST00000477377 LINC00474Q9P2X8 69 aa9.71□□□□□ -0.86
COMMD6-209ENST00000477377 TNXBP22105 4242 aa9.71□□□□□ -0.86
COMMD6-209ENST00000477377 LOC107984640A0A0U1RRK4 108 aa9.7□□□□□ -0.86
COMMD6-209ENST00000477377 NPSP0C0P6 89 aa9.7□□□□□ -0.86
COMMD6-209ENST00000477377 GAGE2BQ13066 116 aa9.7□□□□□ -0.86
COMMD6-209ENST00000477377 TEX43Q6ZNM6 134 aa9.7□□□□□ -0.86
COMMD6-209ENST00000477377 FAM19A3Q7Z5A8 133 aa9.7□□□□□ -0.86
COMMD6-209ENST00000477377 MRPL35Q9NZE8 188 aaKnown RBP9.7□□□□□ -0.86
COMMD6-209ENST00000477377 UNQ6190/PRO20217Q6UXQ8 127 aa9.69□□□□□ -0.86
COMMD6-209ENST00000477377 TOMM6Q96B49 74 aa9.69□□□□□ -0.86
COMMD6-209ENST00000477377 F8WDY8 70 aa9.68□□□□□ -0.86
COMMD6-209ENST00000477377 MT1HL1P0DM35 61 aa9.68□□□□□ -0.86
COMMD6-209ENST00000477377 PRR3P79522 188 aaKnown RBP9.68□□□□□ -0.86
COMMD6-209ENST00000477377 RHEBQ15382 184 aa9.68□□□□□ -0.86
COMMD6-209ENST00000477377 C6orf48Q9UBA6 75 aa9.68□□□□□ -0.86
COMMD6-209ENST00000477377 PKIGQ9Y2B9 76 aa9.68□□□□□ -0.86
COMMD6-209ENST00000477377 S100PP25815 95 aa9.67□□□□□ -0.86
COMMD6-209ENST00000477377 LINC01561Q8N1V8 128 aa9.67□□□□□ -0.86
COMMD6-209ENST00000477377 C7orf33Q8WU49 177 aa9.67□□□□□ -0.86
COMMD6-209ENST00000477377 VCX2Q9H322 139 aa9.67□□□□□ -0.86
COMMD6-209ENST00000477377 RPS10P5Q9NQ39 176 aa9.67□□□□□ -0.86
COMMD6-209ENST00000477377 TGIF2-C20orf24A0A0A6YYL0 155 aa9.66□□□□□ -0.86
COMMD6-209ENST00000477377 TLX1NBP0CAT3 122 aa9.66□□□□□ -0.86
COMMD6-209ENST00000477377 TIMM17AQ99595 171 aa9.66□□□□□ -0.86
COMMD6-209ENST00000477377 C9orf116Q5BN46 136 aaPredicted RBP9.65□□□□□ -0.86
COMMD6-209ENST00000477377 Q6ZRP5 223 aa9.65□□□□□ -0.86
COMMD6-209ENST00000477377 MRPL18Q9H0U6 180 aaKnown RBP9.65□□□□□ -0.86
COMMD6-209ENST00000477377 NDUFA1O15239 70 aa9.64□□□□□ -0.87
COMMD6-209ENST00000477377 COX19Q49B96 90 aa9.64□□□□□ -0.87
COMMD6-209ENST00000477377 C2orf82Q6UX34 121 aa9.64□□□□□ -0.87
COMMD6-209ENST00000477377 Q6ZN92 141 aa9.64□□□□□ -0.87
COMMD6-209ENST00000477377 KRTAP7-1Q8IUC3 87 aa9.64□□□□□ -0.87
COMMD6-209ENST00000477377 URB1-AS1Q96HZ7 61 aa9.64□□□□□ -0.87
COMMD6-209ENST00000477377 C2orf88Q9BSF0 95 aa9.64□□□□□ -0.87
COMMD6-209ENST00000477377 RPL18AQ02543 176 aaKnown RBP9.63□□□□□ -0.87
COMMD6-209ENST00000477377 SRSF9Q13242 221 aaKnown RBP eCLIP9.63□□□□□ -0.87
COMMD6-209ENST00000477377 ERASQ7Z444 233 aa9.63□□□□□ -0.87
COMMD6-209ENST00000477377 MT-ND6P03923 174 aa9.62□□□□□ -0.87
COMMD6-209ENST00000477377 G0S2P27469 103 aa9.62□□□□□ -0.87
COMMD6-209ENST00000477377 FABP9Q0Z7S8 132 aa9.62□□□□□ -0.87
COMMD6-209ENST00000477377 CDKN2A-AS1Q9UH64 79 aa9.62□□□□□ -0.87
COMMD6-209ENST00000477377 A0A096LNJ9 63 aa9.61□□□□□ -0.87
COMMD6-209ENST00000477377 FAM168BA1KXE4 195 aa9.61□□□□□ -0.87
COMMD6-209ENST00000477377 YPEL4Q96NS1 127 aa9.61□□□□□ -0.87
COMMD6-209ENST00000477377 SCGB3A1Q96QR1 104 aa9.61□□□□□ -0.87
COMMD6-209ENST00000477377 APOC3P02656 99 aa9.6□□□□□ -0.87
COMMD6-209ENST00000477377 PHF5AQ7RTV0 110 aaKnown RBP9.6□□□□□ -0.87
COMMD6-209ENST00000477377 KRTAP11-1Q8IUC1 163 aa9.6□□□□□ -0.87
COMMD6-209ENST00000477377 TRBV30A0A0K0K1B3 111 aa9.59□□□□□ -0.87
COMMD6-209ENST00000477377 HERVK_113P63121 156 aa9.59□□□□□ -0.87
COMMD6-209ENST00000477377 PAPPA-AS1Q5QFB9 102 aa9.59□□□□□ -0.87
COMMD6-209ENST00000477377 IGLV5-45A0A087WSX0 123 aa9.58□□□□□ -0.88
COMMD6-209ENST00000477377 Q8IZM0 81 aa9.58□□□□□ -0.88
COMMD6-209ENST00000477377 C18orf32Q8TCD1 76 aa9.58□□□□□ -0.88
COMMD6-209ENST00000477377 CST9LQ9H4G1 147 aa9.58□□□□□ -0.88
COMMD6-209ENST00000477377 TRAPPC1Q9Y5R8 145 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms