RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TRAV26-2A0A0B4J265 109 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 C7orf77A4D0Y5 90 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 FAM231BA6NCW3 169 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 MRPL52Q86TS9 123 aaKnown RBP4.54□□□□□ -1.68
BRCA1-214ENST00000477152 ZNF664Q8N3J9 261 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 KIR2DL4Q99706 377 aa4.54□□□□□ -1.68
BRCA1-214ENST00000477152 RNASE7Q9H1E1 156 aaKnown RBP4.54□□□□□ -1.68
BRCA1-214ENST00000477152 IGLV4-69A0A075B6H9 119 aa4.53□□□□□ -1.68
BRCA1-214ENST00000477152 A0A1B0GUT8 65 aa4.53□□□□□ -1.68
BRCA1-214ENST00000477152 F8WDY8 70 aa4.53□□□□□ -1.68
BRCA1-214ENST00000477152 PPP1R2P9O14990 202 aa4.53□□□□□ -1.68
BRCA1-214ENST00000477152 RPL39LQ96EH5 51 aaKnown RBP4.53□□□□□ -1.68
BRCA1-214ENST00000477152 TRBV20OR9-2A0A075B6H5 130 aa4.53□□□□□ -1.68
BRCA1-214ENST00000477152 IGKV2D-30A0A075B6S6 120 aa4.53□□□□□ -1.68
BRCA1-214ENST00000477152 COX7A2LO14548 114 aa4.53□□□□□ -1.68
BRCA1-214ENST00000477152 FOXA3P55318 350 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-214ENST00000477152 RIGQ13278 110 aa4.53□□□□□ -1.68
BRCA1-214ENST00000477152 CAMK2N2Q96S95 79 aa4.53□□□□□ -1.68
BRCA1-214ENST00000477152 TMEM191AQ9H0A3 160 aa4.53□□□□□ -1.68
BRCA1-214ENST00000477152 CSDC2Q9Y534 153 aaKnown RBP4.53□□□□□ -1.68
BRCA1-214ENST00000477152 FAT3Q8TDW7 4589 aa4.52□□□□□ -1.69
BRCA1-214ENST00000477152 MT-ND6P03923 174 aa4.52□□□□□ -1.69
BRCA1-214ENST00000477152 ESDP10768 282 aa4.52□□□□□ -1.69
BRCA1-214ENST00000477152 C2orf48Q96LS8 159 aa4.52□□□□□ -1.69
BRCA1-214ENST00000477152 CDC42SE2Q9NRR3 84 aa4.52□□□□□ -1.69
BRCA1-214ENST00000477152 TMEM242Q9NWH2 141 aa4.52□□□□□ -1.69
BRCA1-214ENST00000477152 LRP1Q07954 4544 aaKnown RBP4.51□□□□□ -1.69
BRCA1-214ENST00000477152 TRBV27A0A0K0K1C4 114 aa4.51□□□□□ -1.69
BRCA1-214ENST00000477152 PKHD1L1Q86WI1 4243 aa4.51□□□□□ -1.69
BRCA1-214ENST00000477152 K7EN84 100 aa4.51□□□□□ -1.69
BRCA1-214ENST00000477152 TSHBP01222 138 aa4.51□□□□□ -1.69
BRCA1-214ENST00000477152 CEBPGP53567 150 aa4.51□□□□□ -1.69
BRCA1-214ENST00000477152 TCTE3Q8IZS6 198 aa4.51□□□□□ -1.69
BRCA1-214ENST00000477152 IMMP2LQ96T52 175 aa4.51□□□□□ -1.69
BRCA1-214ENST00000477152 POLR2KP53803 58 aaKnown RBP4.5□□□□□ -1.69
BRCA1-214ENST00000477152 OR10D4PQ8NGN7 298 aa4.5□□□□□ -1.69
BRCA1-214ENST00000477152 SMIM7Q9BQ49 75 aa4.5□□□□□ -1.69
BRCA1-214ENST00000477152 EIF5A2Q9GZV4 153 aaKnown RBP4.5□□□□□ -1.69
BRCA1-214ENST00000477152 OSTCQ9NRP0 149 aa4.5□□□□□ -1.69
BRCA1-214ENST00000477152 HMCN2Q8NDA2 5059 aa4.5□□□□□ -1.69
BRCA1-214ENST00000477152 A0A1B0GW15 77 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 LINC00862A6NCI5 91 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 C5orf52A6NGY3 159 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 HIGD1CA8MV81 97 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 S100A8P05109 93 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 RAB4AP20338 218 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 RPL18AQ02543 176 aaKnown RBP4.49□□□□□ -1.69
BRCA1-214ENST00000477152 SRSF9Q13242 221 aaKnown RBP eCLIP4.49□□□□□ -1.69
BRCA1-214ENST00000477152 DIRC1Q969H9 104 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 TIMM21Q9BVV7 248 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 PSORS1C2Q9UIG4 136 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 ZNF727A8MUV8 499 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 TMEM241Q24JQ0 296 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 NUP35Q8NFH5 326 aa4.49□□□□□ -1.69
BRCA1-214ENST00000477152 IGLV9-49A0A0B4J1Y8 123 aa4.48□□□□□ -1.69
BRCA1-214ENST00000477152 TRAV13-1A0A0B4J241 112 aa4.48□□□□□ -1.69
BRCA1-214ENST00000477152 NDUFA1O15239 70 aa4.48□□□□□ -1.69
BRCA1-214ENST00000477152 LINC01547P58512 204 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-214ENST00000477152 SPAG11BQ08648 103 aa4.48□□□□□ -1.69
BRCA1-214ENST00000477152 FAM74A3Q4VXF1 159 aa4.48□□□□□ -1.69
BRCA1-214ENST00000477152 C1orf137Q5JT78 98 aa4.48□□□□□ -1.69
BRCA1-214ENST00000477152 LINC00526Q96FQ7 95 aa4.48□□□□□ -1.69
BRCA1-214ENST00000477152 C20orf78Q9BR46 151 aa4.48□□□□□ -1.69
BRCA1-214ENST00000477152 NAT8BQ9UHF3 227 aa4.48□□□□□ -1.69
BRCA1-214ENST00000477152 F8W036 122 aa4.47□□□□□ -1.69
BRCA1-214ENST00000477152 C9orf116Q5BN46 136 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-214ENST00000477152 SMIM29Q86T20 159 aa4.47□□□□□ -1.69
BRCA1-214ENST00000477152 AMN1Q8IY45 258 aa4.47□□□□□ -1.69
BRCA1-214ENST00000477152 MRPL35Q9NZE8 188 aaKnown RBP4.47□□□□□ -1.69
BRCA1-214ENST00000477152 UBE2D4Q9Y2X8 147 aa4.47□□□□□ -1.69
BRCA1-214ENST00000477152 LINC01551Q86U37 167 aa4.47□□□□□ -1.69
BRCA1-214ENST00000477152 SPANXA1Q9NS26 97 aa4.47□□□□□ -1.69
BRCA1-214ENST00000477152 TGIF2-C20orf24A0A0A6YYL0 155 aa4.46□□□□□ -1.7
BRCA1-214ENST00000477152 CKS2P33552 79 aa4.46□□□□□ -1.7
BRCA1-214ENST00000477152 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.7
BRCA1-214ENST00000477152 HBBP68871 147 aa4.46□□□□□ -1.7
BRCA1-214ENST00000477152 C5orf38Q86SI9 138 aa4.46□□□□□ -1.7
BRCA1-214ENST00000477152 ORAOV1Q8WV07 137 aa4.46□□□□□ -1.7
BRCA1-214ENST00000477152 IGLV1-50A0A075B6I6 118 aa4.45□□□□□ -1.7
BRCA1-214ENST00000477152 A0A087WZ39 114 aa4.45□□□□□ -1.7
BRCA1-214ENST00000477152 PPBPP02775 128 aa4.45□□□□□ -1.7
BRCA1-214ENST00000477152 RAB5AP20339 215 aa4.45□□□□□ -1.7
BRCA1-214ENST00000477152 RPL13AP40429 203 aaKnown RBP4.45□□□□□ -1.7
BRCA1-214ENST00000477152 UBE2D1P51668 147 aa4.45□□□□□ -1.7
BRCA1-214ENST00000477152 ALKAL2Q6UX46 152 aa4.45□□□□□ -1.7
BRCA1-214ENST00000477152 AKAP14Q86UN6 197 aa4.45□□□□□ -1.7
BRCA1-214ENST00000477152 A0A1W2PNN7 141 aa4.45□□□□□ -1.7
BRCA1-214ENST00000477152 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-214ENST00000477152 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
BRCA1-214ENST00000477152 IFI27P40305 119 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-214ENST00000477152 MRPS36P82909 103 aaKnown RBP4.45□□□□□ -1.7
BRCA1-214ENST00000477152 FAM104BQ5XKR9 115 aa4.45□□□□□ -1.7
BRCA1-214ENST00000477152 PACRGQ96M98 296 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-214ENST00000477152 TRBV24-1A0A075B6N3 115 aa4.44□□□□□ -1.7
BRCA1-214ENST00000477152 IFITM10A6NMD0 228 aa4.44□□□□□ -1.7
BRCA1-214ENST00000477152 IGLV7-43P04211 117 aa4.44□□□□□ -1.7
BRCA1-214ENST00000477152 UBE2BP63146 152 aa4.44□□□□□ -1.7
BRCA1-214ENST00000477152 UBR4Q5T4S7 5183 aa4.44□□□□□ -1.7
BRCA1-214ENST00000477152 A0A0U1RQV1 116 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms