RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 RNASE4P34096 147 aaKnown RBP1.65□□□□□ -2.15
PTCD3-211ENST00000476215 SULT1A1P50225 295 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 H2BFSP57053 126 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 ZNF846Q147U1 533 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 MIC13Q5XKP0 118 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 Q6ZTI0 123 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 OR2D3Q8NGH3 330 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 TMEM263Q8WUH6 116 aaKnown RBP1.65□□□□□ -2.15
PTCD3-211ENST00000476215 GNPNAT1Q96EK6 184 aaPredicted RBP1.65□□□□□ -2.15
PTCD3-211ENST00000476215 ODF3Q96PU9 254 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 LINC00467Q9BRT7 94 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 SLC50A1Q9BRV3 221 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 PARD6GQ9BYG4 376 aaPredicted RBP1.65□□□□□ -2.15
PTCD3-211ENST00000476215 NKX6-2Q9C056 277 aaPredicted RBP1.65□□□□□ -2.15
PTCD3-211ENST00000476215 SLC39A9Q9NUM3 307 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 UQCC1Q9NVA1 299 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 TMEM14CQ9P0S9 112 aa1.65□□□□□ -2.15
PTCD3-211ENST00000476215 LSM5Q9Y4Y9 91 aaKnown RBP1.65□□□□□ -2.15
PTCD3-211ENST00000476215 C7orf71A4D174 169 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 M0R3E3 92 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 SPINK4O60575 86 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 SIX6O95475 246 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 GPX1P07203 203 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 NBEAP1P0C6P0 100 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 PYYP10082 97 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 PDE6HQ13956 83 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 C4orf26Q17RF5 130 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 TPRXLQ17RH7 258 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 LINC00299Q6ZSB3 139 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 STX12Q86Y82 276 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 EXOC3-AS1Q8N2X6 119 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 FAM167A-AS1Q96KT0 104 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 PFDN5Q99471 154 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 NPCDR1Q9BY65 106 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 LYRM2Q9NU23 88 aaPredicted RBP1.64□□□□□ -2.15
PTCD3-211ENST00000476215 PRO2289Q9P1D8 64 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 HHLA3Q9XRX5 114 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 PRELID1Q9Y255 219 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 TIMM9Q9Y5J7 89 aa1.64□□□□□ -2.15
PTCD3-211ENST00000476215 DMBT1Q9UGM3 2413 aaPredicted RBP1.64□□□□□ -2.15
PTCD3-211ENST00000476215 LRP1Q07954 4544 aaKnown RBP1.63□□□□□ -2.15
PTCD3-211ENST00000476215 TRGV2A0A075B6R0 118 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 IGKV2-40A0A087WW87 121 aaPredicted RBP1.63□□□□□ -2.15
PTCD3-211ENST00000476215 A0A096LPF7 62 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 TRGV1A0A0A0MS02 117 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 UBE2L5PA0A1B0GUS4 154 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 INMT-MINDY4F8WBC2 141 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 IGKV2D-40P01614 121 aaPredicted RBP1.63□□□□□ -2.15
PTCD3-211ENST00000476215 ORM1P02763 201 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 LINC00614P0C842 121 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 PET100P0DJ07 73 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 FGF7P21781 194 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 XCL1P47992 114 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 CRYBA4P53673 196 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 TCL1AP56279 114 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 S100A10P60903 97 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 RANP62826 216 aaKnown RBP1.63□□□□□ -2.15
PTCD3-211ENST00000476215 TMEM78Q5T7P6 136 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 LYPD5Q6UWN5 251 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 MIR17HGQ75NE6 70 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 SPATA12Q7Z6I5 190 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 IQCF2Q8IXL9 164 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 S100ZQ8WXG8 99 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 CCDC32Q9BV29 185 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 MRPL32Q9BYC8 188 aaKnown RBP1.63□□□□□ -2.15
PTCD3-211ENST00000476215 NMES1Q9C002 83 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 OR5AC2Q9NZP5 309 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 PRO0255Q9UI72 69 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 FUT9Q9Y231 359 aa1.63□□□□□ -2.15
PTCD3-211ENST00000476215 FAT3Q8TDW7 4589 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 TRAV8-1A0A0A6YYK1 113 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 RBAKDNA6NC62 111 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 C17orf112F2Z3M2 114 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 MPC2O95563 127 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 IFNA5P01569 189 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 OR10J4P0C629 311 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 RPL12P30050 165 aaKnown RBP1.62□□□□□ -2.15
PTCD3-211ENST00000476215 CSN1S1P47710 185 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 TDRG1Q3Y452 100 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 IBA57Q5T440 356 aaKnown RBP1.62□□□□□ -2.15
PTCD3-211ENST00000476215 Q6AWC8 147 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 Q6ZRN7 208 aaPredicted RBP1.62□□□□□ -2.15
PTCD3-211ENST00000476215 PPP1R1CQ8WVI7 109 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 HYLS1Q96M11 299 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 TIMM21Q9BVV7 248 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 WDR61Q9GZS3 305 aaKnown RBP1.62□□□□□ -2.15
PTCD3-211ENST00000476215 OTORQ9NRC9 128 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 HSPB11Q9Y547 144 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 LENEPQ9Y5L5 61 aa1.62□□□□□ -2.15
PTCD3-211ENST00000476215 FLG2Q5D862 2391 aaPredicted RBP1.62□□□□□ -2.15
PTCD3-211ENST00000476215 TRAV4A0A0B4J268 109 aa1.61□□□□□ -2.15
PTCD3-211ENST00000476215 A0A1B0GVG6 124 aa1.61□□□□□ -2.15
PTCD3-211ENST00000476215 K7EP13 123 aa1.61□□□□□ -2.15
PTCD3-211ENST00000476215 M0R2P5 195 aa1.61□□□□□ -2.15
PTCD3-211ENST00000476215 SSNA1O43805 119 aa1.61□□□□□ -2.15
PTCD3-211ENST00000476215 SFTA3P0C7M3 94 aa1.61□□□□□ -2.15
PTCD3-211ENST00000476215 EVI2AP22794 236 aa1.61□□□□□ -2.15
PTCD3-211ENST00000476215 GOLT1AQ6ZVE7 132 aa1.61□□□□□ -2.15
PTCD3-211ENST00000476215 Q8TAT8 98 aa1.61□□□□□ -2.15
PTCD3-211ENST00000476215 SMIM3Q9BZL3 60 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms