RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-223ENST00000476135 LINC01547P58512 204 aaPredicted RBP4.38□□□□□ -1.71
HDAC9-223ENST00000476135 MRPL54Q6P161 138 aaKnown RBP4.38□□□□□ -1.71
HDAC9-223ENST00000476135 Q6ZRP5 223 aa4.38□□□□□ -1.71
HDAC9-223ENST00000476135 MRAP2Q96G30 205 aa4.38□□□□□ -1.71
HDAC9-223ENST00000476135 BTF3L4Q96K17 158 aa4.38□□□□□ -1.71
HDAC9-223ENST00000476135 IMMP2LQ96T52 175 aa4.38□□□□□ -1.71
HDAC9-223ENST00000476135 NIT2Q9NQR4 276 aa4.38□□□□□ -1.71
HDAC9-223ENST00000476135 TRAV9-1A0A075B6T8 112 aa4.37□□□□□ -1.71
HDAC9-223ENST00000476135 SNAPINO95295 136 aa4.37□□□□□ -1.71
HDAC9-223ENST00000476135 MIAQ16674 131 aa4.37□□□□□ -1.71
HDAC9-223ENST00000476135 C10orf91Q5T1B1 145 aa4.37□□□□□ -1.71
HDAC9-223ENST00000476135 AMN1Q8IY45 258 aa4.37□□□□□ -1.71
HDAC9-223ENST00000476135 SVBPQ8N300 66 aa4.37□□□□□ -1.71
HDAC9-223ENST00000476135 MUC17Q685J3 4493 aa4.37□□□□□ -1.71
HDAC9-223ENST00000476135 TRBV25-1A0A075B6N4 114 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 TRBV6-8A0A0A6YYG3 113 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 IGHV1-24A0A0C4DH33 117 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 A0A1B0GXF2 115 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 APOC3P02656 99 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 COTL1Q14019 142 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 FAM104BQ5XKR9 115 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 KRTAP26-1Q6PEX3 210 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 STPG4Q8N801 248 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 PRR26Q8N8Z3 221 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 GATD1Q8NB37 220 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 ST20Q9HBF5 79 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 RPS10P5Q9NQ39 176 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 TMEM242Q9NWH2 141 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 Q9UF83 564 aa4.36□□□□□ -1.71
HDAC9-223ENST00000476135 TRBV6-5A0A0K0K1A5 114 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 hDV102S1A0JD36 115 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 C7orf77A4D0Y5 90 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 SDHAF1A6NFY7 115 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 HSBP1L1C9JCN9 74 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 UBE2L6O14933 153 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 NCR2O95944 276 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 PPBPP02775 128 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 RAB4AP20338 218 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 CKS2P33552 79 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 SEC61GP60059 68 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
HDAC9-223ENST00000476135 CHCHD5Q9BSY4 110 aa4.35□□□□□ -1.71
HDAC9-223ENST00000476135 TCAPO15273 167 aa4.34□□□□□ -1.71
HDAC9-223ENST00000476135 APCSP02743 223 aa4.34□□□□□ -1.71
HDAC9-223ENST00000476135 AMTP48728 403 aa4.34□□□□□ -1.71
HDAC9-223ENST00000476135 COX6A2Q02221 97 aa4.34□□□□□ -1.71
HDAC9-223ENST00000476135 IQCJQ1A5X6 159 aa4.34□□□□□ -1.71
HDAC9-223ENST00000476135 COX19Q49B96 90 aa4.34□□□□□ -1.71
HDAC9-223ENST00000476135 MRPL51Q4U2R6 128 aaKnown RBP4.34□□□□□ -1.71
HDAC9-223ENST00000476135 ORMDL3Q8N138 153 aa4.34□□□□□ -1.71
HDAC9-223ENST00000476135 TMEM243Q9BU79 118 aa4.34□□□□□ -1.71
HDAC9-223ENST00000476135 IGLV1-50A0A075B6I6 118 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 D6R8Y8 96 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 TMEM262E9PQX1 116 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 SMKR1H3BMG3 65 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 I3L3M4 83 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 MT-ND6P03923 174 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 ANGP03950 147 aaKnown RBP4.33□□□□□ -1.72
HDAC9-223ENST00000476135 PMCHP20382 165 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 FCER1GP30273 86 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 SMAGPQ0VAQ4 97 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 KIR2DL4Q99706 377 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 C20orf78Q9BR46 151 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 LAMTOR2Q9Y2Q5 125 aa4.33□□□□□ -1.72
HDAC9-223ENST00000476135 IGLV10-54A0A075B6I4 117 aa4.32□□□□□ -1.72
HDAC9-223ENST00000476135 IGKV2-24A0A0C4DH68 120 aa4.32□□□□□ -1.72
HDAC9-223ENST00000476135 TRBV27A0A0K0K1C4 114 aa4.32□□□□□ -1.72
HDAC9-223ENST00000476135 RPS10P46783 165 aaKnown RBP4.32□□□□□ -1.72
HDAC9-223ENST00000476135 RPL32P62910 135 aaKnown RBP4.32□□□□□ -1.72
HDAC9-223ENST00000476135 GAGE6Q13070 117 aa4.32□□□□□ -1.72
HDAC9-223ENST00000476135 PAPPA-AS1Q5QFB9 102 aa4.32□□□□□ -1.72
HDAC9-223ENST00000476135 TMEM136Q6ZRR5 245 aa4.32□□□□□ -1.72
HDAC9-223ENST00000476135 NTM-AS1Q6ZSK4 140 aa4.32□□□□□ -1.72
HDAC9-223ENST00000476135 NRACQ8N912 160 aa4.32□□□□□ -1.72
HDAC9-223ENST00000476135 PRSS3P2Q8NHM4 247 aa4.32□□□□□ -1.72
HDAC9-223ENST00000476135 PRELID3AQ96N28 172 aa4.32□□□□□ -1.72
HDAC9-223ENST00000476135 GEMIN7Q9H840 131 aaKnown RBP4.32□□□□□ -1.72
HDAC9-223ENST00000476135 PRR34Q9NV39 138 aa4.32□□□□□ -1.72
HDAC9-223ENST00000476135 TRBV24-1A0A075B6N3 115 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 H7C423 109 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 NPYP01303 97 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 ZNF25P17030 456 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-223ENST00000476135 POLR2KP53803 58 aaKnown RBP4.31□□□□□ -1.72
HDAC9-223ENST00000476135 RBX1P62877 108 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 MPV17L2Q567V2 206 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 C6orf226Q5I0X4 101 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 AMMECR1LQ6DCA0 310 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 SLC7A5P1Q8MH63 180 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 TMEM101Q96IK0 257 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 SMIM2Q9BVW6 85 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 GNB1LQ9BYB4 327 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 MAP1LC3AQ9H492 121 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 LINC00474Q9P2X8 69 aa4.31□□□□□ -1.72
HDAC9-223ENST00000476135 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.3□□□□□ -1.72
HDAC9-223ENST00000476135 IGKV2-29A2NJV5 120 aaPredicted RBP4.3□□□□□ -1.72
HDAC9-223ENST00000476135 TSHBP01222 138 aa4.3□□□□□ -1.72
HDAC9-223ENST00000476135 RAB5AP20339 215 aa4.3□□□□□ -1.72
HDAC9-223ENST00000476135 DIRC1Q969H9 104 aa4.3□□□□□ -1.72
HDAC9-223ENST00000476135 A0A096LNI7 61 aa4.29□□□□□ -1.72
HDAC9-223ENST00000476135 TGIF2-C20orf24A0A0A6YYL0 155 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms