RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 FABP9Q0Z7S8 132 aa8.94□□□□□ -0.98
ATG9A-220ENST00000475339 ORMDL2Q53FV1 153 aa8.94□□□□□ -0.98
ATG9A-220ENST00000475339 MRPL18Q9H0U6 180 aaKnown RBP8.94□□□□□ -0.98
ATG9A-220ENST00000475339 TGIF2-C20orf24A0A0A6YYL0 155 aa8.93□□□□□ -0.98
ATG9A-220ENST00000475339 C1orf196B1AJZ1 125 aa8.93□□□□□ -0.98
ATG9A-220ENST00000475339 K7EMI3 77 aa8.93□□□□□ -0.98
ATG9A-220ENST00000475339 FOXI1Q12951 378 aa8.93□□□□□ -0.98
ATG9A-220ENST00000475339 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.92□□□□□ -0.98
ATG9A-220ENST00000475339 IFITM10A6NMD0 228 aa8.92□□□□□ -0.98
ATG9A-220ENST00000475339 MRPS36P82909 103 aaKnown RBP8.92□□□□□ -0.98
ATG9A-220ENST00000475339 CD164L2Q6UWJ8 174 aa8.92□□□□□ -0.98
ATG9A-220ENST00000475339 CYSLTR1Q9Y271 337 aa8.92□□□□□ -0.98
ATG9A-220ENST00000475339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.92□□□□□ -0.98
ATG9A-220ENST00000475339 PANO1I0J062 215 aa8.91□□□□□ -0.98
ATG9A-220ENST00000475339 MALP21145 153 aa8.91□□□□□ -0.98
ATG9A-220ENST00000475339 G0S2P27469 103 aa8.91□□□□□ -0.98
ATG9A-220ENST00000475339 KRTAP10-8P60410 259 aa8.91□□□□□ -0.98
ATG9A-220ENST00000475339 HIGD2BQ4VC39 106 aa8.91□□□□□ -0.98
ATG9A-220ENST00000475339 C15orf56Q8N910 161 aa8.91□□□□□ -0.98
ATG9A-220ENST00000475339 PRSS3P2Q8NHM4 247 aa8.91□□□□□ -0.98
ATG9A-220ENST00000475339 IGHV1-58A0A0C4DH39 117 aa8.9□□□□□ -0.98
ATG9A-220ENST00000475339 A0A0J9YXV3 536 aa8.9□□□□□ -0.98
ATG9A-220ENST00000475339 COX7A2LO14548 114 aa8.9□□□□□ -0.98
ATG9A-220ENST00000475339 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.98
ATG9A-220ENST00000475339 C2orf66Q6UXQ4 117 aa8.9□□□□□ -0.98
ATG9A-220ENST00000475339 Q6ZN92 141 aa8.9□□□□□ -0.98
ATG9A-220ENST00000475339 OPRPNQ99935 248 aaPredicted RBP8.9□□□□□ -0.98
ATG9A-220ENST00000475339 ALKBH7Q9BT30 221 aaPredicted RBP8.9□□□□□ -0.98
ATG9A-220ENST00000475339 TRAPPC1Q9Y5R8 145 aa8.9□□□□□ -0.98
ATG9A-220ENST00000475339 SLC7A5P1Q8MH63 180 aa8.89□□□□□ -0.99
ATG9A-220ENST00000475339 TMEM141Q96I45 108 aa8.89□□□□□ -0.99
ATG9A-220ENST00000475339 C2orf88Q9BSF0 95 aa8.89□□□□□ -0.99
ATG9A-220ENST00000475339 PYGO1Q9Y3Y4 419 aa8.89□□□□□ -0.99
ATG9A-220ENST00000475339 FSIP2Q5CZC0 6907 aa8.88□□□□□ -0.99
ATG9A-220ENST00000475339 IGLV4-3A0A075B6K6 122 aa8.88□□□□□ -0.99
ATG9A-220ENST00000475339 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
ATG9A-220ENST00000475339 TEX43Q6ZNM6 134 aa8.88□□□□□ -0.99
ATG9A-220ENST00000475339 FA2HQ7L5A8 372 aa8.88□□□□□ -0.99
ATG9A-220ENST00000475339 SMCO4Q9NRQ5 59 aa8.88□□□□□ -0.99
ATG9A-220ENST00000475339 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
ATG9A-220ENST00000475339 C9orf163Q8N9P6 203 aa8.87□□□□□ -0.99
ATG9A-220ENST00000475339 IGHV3-64A0A075B6Q5 118 aa8.86□□□□□ -0.99
ATG9A-220ENST00000475339 APOMO95445 188 aa8.86□□□□□ -0.99
ATG9A-220ENST00000475339 C5orf38Q86SI9 138 aa8.86□□□□□ -0.99
ATG9A-220ENST00000475339 NPSP0C0P6 89 aa8.85□□□□□ -0.99
ATG9A-220ENST00000475339 PAPPA-AS1Q5QFB9 102 aa8.85□□□□□ -0.99
ATG9A-220ENST00000475339 CBLN2Q8IUK8 224 aa8.85□□□□□ -0.99
ATG9A-220ENST00000475339 FAM104AQ969W3 186 aa8.85□□□□□ -0.99
ATG9A-220ENST00000475339 VCX2Q9H322 139 aa8.85□□□□□ -0.99
ATG9A-220ENST00000475339 TOMM6Q96B49 74 aa8.84□□□□□ -0.99
ATG9A-220ENST00000475339 SCGB3A1Q96QR1 104 aa8.84□□□□□ -0.99
ATG9A-220ENST00000475339 CRCT1Q9UGL9 99 aa8.84□□□□□ -0.99
ATG9A-220ENST00000475339 LINC01549A6NIU2 74 aa8.83□□□□□ -1
ATG9A-220ENST00000475339 SLPIP03973 132 aa8.83□□□□□ -1
ATG9A-220ENST00000475339 LINC00526Q96FQ7 95 aa8.83□□□□□ -1
ATG9A-220ENST00000475339 CARD19Q96LW7 228 aa8.83□□□□□ -1
ATG9A-220ENST00000475339 TIMM17AQ99595 171 aa8.83□□□□□ -1
ATG9A-220ENST00000475339 PKIGQ9Y2B9 76 aa8.83□□□□□ -1
ATG9A-220ENST00000475339 IGIPA6NJ69 53 aa8.82□□□□□ -1
ATG9A-220ENST00000475339 SPAG11BQ08648 103 aa8.82□□□□□ -1
ATG9A-220ENST00000475339 IGHV3OR16-9A0A0B4J2B5 98 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 LINC01546A6NGU7 62 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 UBE2D1P51668 147 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 SYCNQ0VAF6 134 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 LINC00242Q5T6M2 205 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 SDIM1Q6ZPB5 146 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 ERASQ7Z444 233 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 OR10D4PQ8NGN7 298 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 C18orf32Q8TCD1 76 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 ORAOV1Q8WV07 137 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 DPH3Q96FX2 82 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 YPEL4Q96NS1 127 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 AMELXQ99217 191 aa8.81□□□□□ -1
ATG9A-220ENST00000475339 IGLV4-69A0A075B6H9 119 aa8.8□□□□□ -1
ATG9A-220ENST00000475339 RAB5BP61020 215 aa8.8□□□□□ -1
ATG9A-220ENST00000475339 ZC2HC1BQ5TFG8 222 aa8.8□□□□□ -1
ATG9A-220ENST00000475339 LINC00173Q6ZV60 143 aa8.8□□□□□ -1
ATG9A-220ENST00000475339 CAMK2N2Q96S95 79 aa8.8□□□□□ -1
ATG9A-220ENST00000475339 LINC00614P0C842 121 aa8.79□□□□□ -1
ATG9A-220ENST00000475339 SEC11AP67812 179 aa8.79□□□□□ -1
ATG9A-220ENST00000475339 COX6A2Q02221 97 aa8.79□□□□□ -1
ATG9A-220ENST00000475339 A0A087WZ39 114 aa8.78□□□□□ -1
ATG9A-220ENST00000475339 C2orf48Q96LS8 159 aa8.78□□□□□ -1
ATG9A-220ENST00000475339 GEMIN7Q9H840 131 aaKnown RBP8.78□□□□□ -1
ATG9A-220ENST00000475339 A0A087WYN8 130 aa8.77□□□□□ -1.01
ATG9A-220ENST00000475339 IGKV2-24A0A0C4DH68 120 aa8.77□□□□□ -1.01
ATG9A-220ENST00000475339 HBDP02042 147 aa8.77□□□□□ -1.01
ATG9A-220ENST00000475339 CHTF8P0CG12 524 aa8.77□□□□□ -1.01
ATG9A-220ENST00000475339 CIRBPQ14011 172 aaKnown RBP8.77□□□□□ -1.01
ATG9A-220ENST00000475339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.76□□□□□ -1.01
ATG9A-220ENST00000475339 HERVK_113P63121 156 aa8.76□□□□□ -1.01
ATG9A-220ENST00000475339 REG3GQ6UW15 175 aa8.76□□□□□ -1.01
ATG9A-220ENST00000475339 PACRGQ96M98 296 aaPredicted RBP8.76□□□□□ -1.01
ATG9A-220ENST00000475339 NDUFA1O15239 70 aa8.75□□□□□ -1.01
ATG9A-220ENST00000475339 PMVKQ15126 192 aa8.75□□□□□ -1.01
ATG9A-220ENST00000475339 PMCHL1Q16048 86 aa8.75□□□□□ -1.01
ATG9A-220ENST00000475339 MAJINQ3KP22 176 aa8.75□□□□□ -1.01
ATG9A-220ENST00000475339 SPACA4Q8TDM5 124 aa8.75□□□□□ -1.01
ATG9A-220ENST00000475339 LINC00474Q9P2X8 69 aa8.75□□□□□ -1.01
ATG9A-220ENST00000475339 F8WDY8 70 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms