RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 TGIF2-C20orf24A0A0A6YYL0 155 aa13.01□□□□□ -0.33
SNX13-206ENST00000474067 LOC107984640A0A0U1RRK4 108 aa13.01□□□□□ -0.33
SNX13-206ENST00000474067 KRTAP10-4P60372 401 aaPredicted RBP13.01□□□□□ -0.33
SNX13-206ENST00000474067 STPG4Q8N801 248 aa13.01□□□□□ -0.33
SNX13-206ENST00000474067 C2orf88Q9BSF0 95 aa13.01□□□□□ -0.33
SNX13-206ENST00000474067 NXT2Q9NPJ8 142 aaKnown RBP13.01□□□□□ -0.33
SNX13-206ENST00000474067 CYSLTR1Q9Y271 337 aa13.01□□□□□ -0.33
SNX13-206ENST00000474067 FLG2Q5D862 2391 aaPredicted RBP13□□□□□ -0.33
SNX13-206ENST00000474067 TMEM218A2RU14 115 aa13□□□□□ -0.33
SNX13-206ENST00000474067 NPSP0C0P6 89 aa13□□□□□ -0.33
SNX13-206ENST00000474067 PAPPA-AS1Q5QFB9 102 aa13□□□□□ -0.33
SNX13-206ENST00000474067 Q8N8P6 123 aa13□□□□□ -0.33
SNX13-206ENST00000474067 SPAG11BQ08648 103 aa12.99□□□□□ -0.33
SNX13-206ENST00000474067 COX19Q49B96 90 aa12.99□□□□□ -0.33
SNX13-206ENST00000474067 TEX43Q6ZNM6 134 aa12.99□□□□□ -0.33
SNX13-206ENST00000474067 C5orf38Q86SI9 138 aa12.99□□□□□ -0.33
SNX13-206ENST00000474067 TMEM141Q96I45 108 aa12.99□□□□□ -0.33
SNX13-206ENST00000474067 SEC11CQ9BY50 192 aa12.99□□□□□ -0.33
SNX13-206ENST00000474067 A0A096LNI7 61 aa12.98□□□□□ -0.33
SNX13-206ENST00000474067 LOC389332A0A1B0GUA5 103 aa12.98□□□□□ -0.33
SNX13-206ENST00000474067 RNF151Q2KHN1 245 aa12.97□□□□□ -0.33
SNX13-206ENST00000474067 LINC01549A6NIU2 74 aa12.96□□□□□ -0.33
SNX13-206ENST00000474067 Q6ZRU5 148 aa12.96□□□□□ -0.33
SNX13-206ENST00000474067 LINC00526Q96FQ7 95 aa12.96□□□□□ -0.33
SNX13-206ENST00000474067 IGHV3OR16-9A0A0B4J2B5 98 aa12.95□□□□□ -0.34
SNX13-206ENST00000474067 C2orf66Q6UXQ4 117 aa12.95□□□□□ -0.34
SNX13-206ENST00000474067 ORAOV1Q8WV07 137 aa12.95□□□□□ -0.34
SNX13-206ENST00000474067 NDUFA1O15239 70 aa12.94□□□□□ -0.34
SNX13-206ENST00000474067 PTTG1IPP53801 180 aa12.94□□□□□ -0.34
SNX13-206ENST00000474067 SEC11AP67812 179 aa12.94□□□□□ -0.34
SNX13-206ENST00000474067 IGLV4-3A0A075B6K6 122 aa12.93□□□□□ -0.34
SNX13-206ENST00000474067 VCX2Q9H322 139 aa12.93□□□□□ -0.34
SNX13-206ENST00000474067 MRPL35Q9NZE8 188 aaKnown RBP12.93□□□□□ -0.34
SNX13-206ENST00000474067 IFITM2Q01629 132 aa12.92□□□□□ -0.34
SNX13-206ENST00000474067 LINC01561Q8N1V8 128 aa12.92□□□□□ -0.34
SNX13-206ENST00000474067 OPRPNQ99935 248 aaPredicted RBP12.92□□□□□ -0.34
SNX13-206ENST00000474067 A0A087WZ39 114 aa12.91□□□□□ -0.34
SNX13-206ENST00000474067 MT-ND6P03923 174 aa12.91□□□□□ -0.34
SNX13-206ENST00000474067 ADCYAP1P18509 176 aa12.91□□□□□ -0.34
SNX13-206ENST00000474067 GAGE2BQ13066 116 aa12.91□□□□□ -0.34
SNX13-206ENST00000474067 COMMD7Q86VX2 200 aa12.91□□□□□ -0.34
SNX13-206ENST00000474067 GNB1LQ9BYB4 327 aa12.91□□□□□ -0.34
SNX13-206ENST00000474067 RPL18AQ02543 176 aaKnown RBP12.9□□□□□ -0.34
SNX13-206ENST00000474067 RHEBQ15382 184 aa12.9□□□□□ -0.34
SNX13-206ENST00000474067 SERTAD4-AS1Q5TG53 156 aa12.9□□□□□ -0.34
SNX13-206ENST00000474067 FAM104AQ969W3 186 aa12.89□□□□□ -0.35
SNX13-206ENST00000474067 LINC00242Q5T6M2 205 aa12.88□□□□□ -0.35
SNX13-206ENST00000474067 TIMM17AQ99595 171 aa12.88□□□□□ -0.35
SNX13-206ENST00000474067 MYCBP2O75592 4640 aa12.87□□□□□ -0.35
SNX13-206ENST00000474067 UBE2D1P51668 147 aa12.87□□□□□ -0.35
SNX13-206ENST00000474067 Q6ZRP5 223 aa12.87□□□□□ -0.35
SNX13-206ENST00000474067 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.86□□□□□ -0.35
SNX13-206ENST00000474067 PRSS2P07478 247 aa12.86□□□□□ -0.35
SNX13-206ENST00000474067 PRR3P79522 188 aaKnown RBP12.86□□□□□ -0.35
SNX13-206ENST00000474067 AMELXQ99217 191 aa12.86□□□□□ -0.35
SNX13-206ENST00000474067 HERVK_113P63121 156 aa12.85□□□□□ -0.35
SNX13-206ENST00000474067 PACRGQ96M98 296 aaPredicted RBP12.85□□□□□ -0.35
SNX13-206ENST00000474067 TRBV30A0A0K0K1B3 111 aa12.84□□□□□ -0.35
SNX13-206ENST00000474067 IGIPA6NJ69 53 aa12.84□□□□□ -0.35
SNX13-206ENST00000474067 TLX1NBP0CAT3 122 aa12.84□□□□□ -0.35
SNX13-206ENST00000474067 NDUFA5Q16718 116 aa12.84□□□□□ -0.35
SNX13-206ENST00000474067 TOMM6Q96B49 74 aa12.84□□□□□ -0.35
SNX13-206ENST00000474067 CARHSP1Q9Y2V2 147 aaKnown RBP12.84□□□□□ -0.35
SNX13-206ENST00000474067 HNRNPA3P51991 378 aaKnown RBP12.83□□□□□ -0.36
SNX13-206ENST00000474067 ERASQ7Z444 233 aa12.83□□□□□ -0.36
SNX13-206ENST00000474067 FAM19A3Q7Z5A8 133 aa12.83□□□□□ -0.36
SNX13-206ENST00000474067 GEMIN7Q9H840 131 aaKnown RBP12.83□□□□□ -0.36
SNX13-206ENST00000474067 RPS10P5Q9NQ39 176 aa12.83□□□□□ -0.36
SNX13-206ENST00000474067 SMCO4Q9NRQ5 59 aa12.83□□□□□ -0.36
SNX13-206ENST00000474067 KIAA1644Q3SXP7 199 aa12.82□□□□□ -0.36
SNX13-206ENST00000474067 C10orf91Q5T1B1 145 aa12.82□□□□□ -0.36
SNX13-206ENST00000474067 CKS1BP61024 79 aa12.81□□□□□ -0.36
SNX13-206ENST00000474067 SPINK6Q6UWN8 80 aa12.81□□□□□ -0.36
SNX13-206ENST00000474067 SCGB3A1Q96QR1 104 aa12.81□□□□□ -0.36
SNX13-206ENST00000474067 C9orf116Q5BN46 136 aaPredicted RBP12.8□□□□□ -0.36
SNX13-206ENST00000474067 REG3GQ6UW15 175 aa12.8□□□□□ -0.36
SNX13-206ENST00000474067 FA2HQ7L5A8 372 aa12.8□□□□□ -0.36
SNX13-206ENST00000474067 FABP9Q0Z7S8 132 aa12.79□□□□□ -0.36
SNX13-206ENST00000474067 UNQ6190/PRO20217Q6UXQ8 127 aa12.79□□□□□ -0.36
SNX13-206ENST00000474067 ALKBH7Q9BT30 221 aaPredicted RBP12.79□□□□□ -0.36
SNX13-206ENST00000474067 C6orf226Q5I0X4 101 aa12.78□□□□□ -0.36
SNX13-206ENST00000474067 LINC00173Q6ZV60 143 aa12.78□□□□□ -0.36
SNX13-206ENST00000474067 Q8IZM0 81 aa12.78□□□□□ -0.36
SNX13-206ENST00000474067 MRPL18Q9H0U6 180 aaKnown RBP12.78□□□□□ -0.36
SNX13-206ENST00000474067 A0A0J9YXV3 536 aa12.77□□□□□ -0.37
SNX13-206ENST00000474067 CXCL5P42830 114 aa12.77□□□□□ -0.37
SNX13-206ENST00000474067 C6orf48Q9UBA6 75 aa12.77□□□□□ -0.37
SNX13-206ENST00000474067 LINC01546A6NGU7 62 aa12.76□□□□□ -0.37
SNX13-206ENST00000474067 NDUFC2-KCTD14E9PQ53 114 aa12.76□□□□□ -0.37
SNX13-206ENST00000474067 SNAPINO95295 136 aa12.76□□□□□ -0.37
SNX13-206ENST00000474067 KIAA0087Q14695 138 aa12.76□□□□□ -0.37
SNX13-206ENST00000474067 SVBPQ8N300 66 aa12.76□□□□□ -0.37
SNX13-206ENST00000474067 TOMM7Q9P0U1 55 aa12.76□□□□□ -0.37
SNX13-206ENST00000474067 HERC1Q15751 4861 aa12.75□□□□□ -0.37
SNX13-206ENST00000474067 A0A1W2PNN7 141 aa12.74□□□□□ -0.37
SNX13-206ENST00000474067 GAGE2EQ4V326 116 aa12.73□□□□□ -0.37
SNX13-206ENST00000474067 C10orf25Q5T742 122 aa12.73□□□□□ -0.37
SNX13-206ENST00000474067 GAGE2DQ9UEU5 116 aa12.73□□□□□ -0.37
SNX13-206ENST00000474067 TINCRA0A1B0GVN0 87 aa12.72□□□□□ -0.37
SNX13-206ENST00000474067 APOC3P02656 99 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms