RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 NDUFA5Q16718 116 aa12.1□□□□□ -0.47
PTCD3-210ENST00000473829 COX19Q49B96 90 aa12.1□□□□□ -0.47
PTCD3-210ENST00000473829 TMEM141Q96I45 108 aa12.1□□□□□ -0.47
PTCD3-210ENST00000473829 MALP21145 153 aa12.09□□□□□ -0.47
PTCD3-210ENST00000473829 CIRBPQ14011 172 aaKnown RBP12.09□□□□□ -0.47
PTCD3-210ENST00000473829 ZC2HC1BQ5TFG8 222 aa12.09□□□□□ -0.47
PTCD3-210ENST00000473829 IGHV3OR16-9A0A0B4J2B5 98 aa12.08□□□□□ -0.48
PTCD3-210ENST00000473829 IGIPA6NJ69 53 aa12.08□□□□□ -0.48
PTCD3-210ENST00000473829 FABP9Q0Z7S8 132 aa12.08□□□□□ -0.48
PTCD3-210ENST00000473829 LINC00173Q6ZV60 143 aa12.08□□□□□ -0.48
PTCD3-210ENST00000473829 IGLV4-69A0A075B6H9 119 aa12.07□□□□□ -0.48
PTCD3-210ENST00000473829 COX6A2Q02221 97 aa12.07□□□□□ -0.48
PTCD3-210ENST00000473829 PRSS3P2Q8NHM4 247 aa12.07□□□□□ -0.48
PTCD3-210ENST00000473829 ZNF561-AS1K7EIQ3 104 aa12.06□□□□□ -0.48
PTCD3-210ENST00000473829 INAFM2P0DMQ5 153 aa12.06□□□□□ -0.48
PTCD3-210ENST00000473829 SPACA4Q8TDM5 124 aa12.06□□□□□ -0.48
PTCD3-210ENST00000473829 CARD19Q96LW7 228 aa12.06□□□□□ -0.48
PTCD3-210ENST00000473829 LINC00242Q5T6M2 205 aa12.05□□□□□ -0.48
PTCD3-210ENST00000473829 TEX43Q6ZNM6 134 aa12.05□□□□□ -0.48
PTCD3-210ENST00000473829 YPEL4Q96NS1 127 aa12.05□□□□□ -0.48
PTCD3-210ENST00000473829 AMELXQ99217 191 aa12.05□□□□□ -0.48
PTCD3-210ENST00000473829 LINC01546A6NGU7 62 aa12.04□□□□□ -0.48
PTCD3-210ENST00000473829 UBE2D1P51668 147 aa12.04□□□□□ -0.48
PTCD3-210ENST00000473829 KRTAP10-4P60372 401 aaPredicted RBP12.04□□□□□ -0.48
PTCD3-210ENST00000473829 SYCNQ0VAF6 134 aa12.04□□□□□ -0.48
PTCD3-210ENST00000473829 Q6ZRU5 148 aa12.04□□□□□ -0.48
PTCD3-210ENST00000473829 TOMM6Q96B49 74 aa12.04□□□□□ -0.48
PTCD3-210ENST00000473829 MYCBP2O75592 4640 aa12.03□□□□□ -0.48
PTCD3-210ENST00000473829 SPAG11BQ08648 103 aa12.03□□□□□ -0.48
PTCD3-210ENST00000473829 SLC7A5P1Q8MH63 180 aa12.03□□□□□ -0.48
PTCD3-210ENST00000473829 TRAPPC1Q9Y5R8 145 aa12.03□□□□□ -0.48
PTCD3-210ENST00000473829 A0A087WYN8 130 aa12.02□□□□□ -0.49
PTCD3-210ENST00000473829 A0A096LNI7 61 aa12.02□□□□□ -0.49
PTCD3-210ENST00000473829 IGKV2-24A0A0C4DH68 120 aa12.02□□□□□ -0.49
PTCD3-210ENST00000473829 APOMO95445 188 aa12.02□□□□□ -0.49
PTCD3-210ENST00000473829 PLA2G1BP04054 148 aaKnown RBP12.02□□□□□ -0.49
PTCD3-210ENST00000473829 NPSP0C0P6 89 aa12.02□□□□□ -0.49
PTCD3-210ENST00000473829 Q6ZN92 141 aa12.02□□□□□ -0.49
PTCD3-210ENST00000473829 ORAOV1Q8WV07 137 aa12.02□□□□□ -0.49
PTCD3-210ENST00000473829 TIMM17AQ99595 171 aa12.02□□□□□ -0.49
PTCD3-210ENST00000473829 OR10D4PQ8NGN7 298 aa12.01□□□□□ -0.49
PTCD3-210ENST00000473829 C2orf88Q9BSF0 95 aa12.01□□□□□ -0.49
PTCD3-210ENST00000473829 VCX2Q9H322 139 aa12.01□□□□□ -0.49
PTCD3-210ENST00000473829 A0A087WZ39 114 aa12□□□□□ -0.49
PTCD3-210ENST00000473829 URB1-AS1Q96HZ7 61 aa12□□□□□ -0.49
PTCD3-210ENST00000473829 C2orf48Q96LS8 159 aa12□□□□□ -0.49
PTCD3-210ENST00000473829 CAMK2N2Q96S95 79 aa12□□□□□ -0.49
PTCD3-210ENST00000473829 FLG2Q5D862 2391 aaPredicted RBP11.99□□□□□ -0.49
PTCD3-210ENST00000473829 G0S2P27469 103 aa11.99□□□□□ -0.49
PTCD3-210ENST00000473829 FA2HQ7L5A8 372 aa11.99□□□□□ -0.49
PTCD3-210ENST00000473829 ERASQ7Z444 233 aa11.99□□□□□ -0.49
PTCD3-210ENST00000473829 CBLN2Q8IUK8 224 aa11.99□□□□□ -0.49
PTCD3-210ENST00000473829 C18orf32Q8TCD1 76 aa11.99□□□□□ -0.49
PTCD3-210ENST00000473829 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
PTCD3-210ENST00000473829 DPH3Q96FX2 82 aa11.98□□□□□ -0.49
PTCD3-210ENST00000473829 SCGB3A1Q96QR1 104 aa11.98□□□□□ -0.49
PTCD3-210ENST00000473829 PLAC8Q9NZF1 115 aa11.98□□□□□ -0.49
PTCD3-210ENST00000473829 FAM19A3Q7Z5A8 133 aa11.97□□□□□ -0.49
PTCD3-210ENST00000473829 SMCO4Q9NRQ5 59 aa11.97□□□□□ -0.49
PTCD3-210ENST00000473829 A0A096LNJ9 63 aa11.96□□□□□ -0.49
PTCD3-210ENST00000473829 A0A0J9YXV3 536 aa11.96□□□□□ -0.49
PTCD3-210ENST00000473829 KIAA0087Q14695 138 aa11.96□□□□□ -0.49
PTCD3-210ENST00000473829 RPL37AP61513 92 aaKnown RBP11.95□□□□□ -0.5
PTCD3-210ENST00000473829 PAPPA-AS1Q5QFB9 102 aa11.95□□□□□ -0.5
PTCD3-210ENST00000473829 C10orf25Q5T742 122 aa11.95□□□□□ -0.5
PTCD3-210ENST00000473829 STPG4Q8N801 248 aa11.95□□□□□ -0.5
PTCD3-210ENST00000473829 PKHD1L1Q86WI1 4243 aa11.94□□□□□ -0.5
PTCD3-210ENST00000473829 LOC107984640A0A0U1RRK4 108 aa11.94□□□□□ -0.5
PTCD3-210ENST00000473829 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.94□□□□□ -0.5
PTCD3-210ENST00000473829 PTTG1IPP53801 180 aa11.93□□□□□ -0.5
PTCD3-210ENST00000473829 UNQ6190/PRO20217Q6UXQ8 127 aa11.93□□□□□ -0.5
PTCD3-210ENST00000473829 MRPL35Q9NZE8 188 aaKnown RBP11.93□□□□□ -0.5
PTCD3-210ENST00000473829 PKIGQ9Y2B9 76 aa11.93□□□□□ -0.5
PTCD3-210ENST00000473829 LINC01549A6NIU2 74 aa11.92□□□□□ -0.5
PTCD3-210ENST00000473829 NDUFA1O15239 70 aa11.92□□□□□ -0.5
PTCD3-210ENST00000473829 LINC00614P0C842 121 aa11.92□□□□□ -0.5
PTCD3-210ENST00000473829 GAGE2BQ13066 116 aa11.92□□□□□ -0.5
PTCD3-210ENST00000473829 PMCHL1Q16048 86 aa11.92□□□□□ -0.5
PTCD3-210ENST00000473829 LINC01561Q8N1V8 128 aa11.92□□□□□ -0.5
PTCD3-210ENST00000473829 C6orf48Q9UBA6 75 aa11.92□□□□□ -0.5
PTCD3-210ENST00000473829 CDKN2A-AS1Q9UH64 79 aa11.92□□□□□ -0.5
PTCD3-210ENST00000473829 F8WDY8 70 aa11.91□□□□□ -0.5
PTCD3-210ENST00000473829 HERVK_113P63121 156 aa11.91□□□□□ -0.5
PTCD3-210ENST00000473829 RNF151Q2KHN1 245 aa11.91□□□□□ -0.5
PTCD3-210ENST00000473829 LINC00474Q9P2X8 69 aa11.91□□□□□ -0.5
PTCD3-210ENST00000473829 HNRNPA3P51991 378 aaKnown RBP11.9□□□□□ -0.5
PTCD3-210ENST00000473829 C2orf82Q6UX34 121 aa11.9□□□□□ -0.5
PTCD3-210ENST00000473829 CST9LQ9H4G1 147 aa11.9□□□□□ -0.5
PTCD3-210ENST00000473829 SEC11AP67812 179 aa11.89□□□□□ -0.51
PTCD3-210ENST00000473829 RPL18AQ02543 176 aaKnown RBP11.89□□□□□ -0.51
PTCD3-210ENST00000473829 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
PTCD3-210ENST00000473829 HBDP02042 147 aa11.88□□□□□ -0.51
PTCD3-210ENST00000473829 PMVKQ15126 192 aa11.88□□□□□ -0.51
PTCD3-210ENST00000473829 TINCRA0A1B0GVN0 87 aa11.87□□□□□ -0.51
PTCD3-210ENST00000473829 TOMM7Q9P0U1 55 aa11.87□□□□□ -0.51
PTCD3-210ENST00000473829 IGLV5-45A0A087WSX0 123 aa11.86□□□□□ -0.51
PTCD3-210ENST00000473829 A0A1W2PNN7 141 aa11.86□□□□□ -0.51
PTCD3-210ENST00000473829 PDZD11Q5EBL8 140 aa11.86□□□□□ -0.51
PTCD3-210ENST00000473829 LINC00469Q8N7U9 141 aa11.86□□□□□ -0.51
PTCD3-210ENST00000473829 HERC1Q15751 4861 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms