RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 CFTRP13569 1480 aa-0.83□□□□□ -2.54
COMMD3-211ENST00000472673 LOC105371267A0A1B0GV96 52 aa-0.83□□□□□ -2.54
COMMD3-211ENST00000472673 HMGN4O00479 90 aa-0.83□□□□□ -2.54
COMMD3-211ENST00000472673 TPPP2P59282 170 aa-0.83□□□□□ -2.54
COMMD3-211ENST00000472673 C12orf73Q69YU5 71 aa-0.83□□□□□ -2.54
COMMD3-211ENST00000472673 COPS9Q8WXC6 57 aa-0.83□□□□□ -2.54
COMMD3-211ENST00000472673 PFDN5Q99471 154 aa-0.83□□□□□ -2.54
COMMD3-211ENST00000472673 RERGLQ9H628 205 aa-0.83□□□□□ -2.54
COMMD3-211ENST00000472673 PSME4Q14997 1843 aa-0.83□□□□□ -2.54
COMMD3-211ENST00000472673 HTTP42858 3142 aa-0.83□□□□□ -2.54
COMMD3-211ENST00000472673 PKHD1L1Q86WI1 4243 aa-0.83□□□□□ -2.54
COMMD3-211ENST00000472673 ARHGEF12Q9NZN5 1544 aa-0.84□□□□□ -2.54
COMMD3-211ENST00000472673 MYO18BQ8IUG5 2567 aa-0.84□□□□□ -2.54
COMMD3-211ENST00000472673 FASNP49327 2511 aaKnown RBP-0.84□□□□□ -2.54
COMMD3-211ENST00000472673 BTAF1O14981 1849 aa-0.84□□□□□ -2.54
COMMD3-211ENST00000472673 POLA1P09884 1462 aaPredicted RBP-0.84□□□□□ -2.54
COMMD3-211ENST00000472673 GAPVD1Q14C86 1478 aa-0.84□□□□□ -2.54
COMMD3-211ENST00000472673 DEFB105AQ8NG35 78 aa-0.84□□□□□ -2.54
COMMD3-211ENST00000472673 NSD3Q9BZ95 1437 aa-0.84□□□□□ -2.54
COMMD3-211ENST00000472673 AKAP9Q99996 3911 aa-0.84□□□□□ -2.54
COMMD3-211ENST00000472673 DNAH3Q8TD57 4116 aa-0.84□□□□□ -2.54
COMMD3-211ENST00000472673 REV3LO60673 3130 aa-0.84□□□□□ -2.54
COMMD3-211ENST00000472673 EPPK1P58107 5090 aaKnown RBP-0.85□□□□□ -2.55
COMMD3-211ENST00000472673 SFT2D2O95562 160 aa-0.85□□□□□ -2.55
COMMD3-211ENST00000472673 LAMA1P25391 3075 aa-0.85□□□□□ -2.55
COMMD3-211ENST00000472673 MEIG1Q5JSS6 88 aa-0.85□□□□□ -2.55
COMMD3-211ENST00000472673 TEP1Q99973 2627 aaKnown RBP-0.85□□□□□ -2.55
COMMD3-211ENST00000472673 LYSTQ99698 3801 aa-0.85□□□□□ -2.55
COMMD3-211ENST00000472673 MYH7P12883 1935 aa-0.85□□□□□ -2.55
COMMD3-211ENST00000472673 RAPGEF6Q8TEU7 1601 aa-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 SHANK2Q9UPX8 1470 aa-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 SONP18583 2426 aaKnown RBP-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 AKAP13Q12802 2813 aa-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 MIF4GDA9UHW6 222 aaKnown RBP-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 FAM25AB3EWG3 89 aa-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 FAM25CB3EWG5 89 aa-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 FAM25GB3EWG6 89 aa-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 SNRNP25Q9BV90 132 aaKnown RBP-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 KNL1Q8NG31 2342 aa-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 TRANK1O15050 2925 aa-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 FAT3Q8TDW7 4589 aa-0.86□□□□□ -2.55
COMMD3-211ENST00000472673 ZZEF1O43149 2961 aa-0.87□□□□□ -2.55
COMMD3-211ENST00000472673 GNG7O60262 68 aa-0.87□□□□□ -2.55
COMMD3-211ENST00000472673 DEFB135Q30KP9 77 aa-0.87□□□□□ -2.55
COMMD3-211ENST00000472673 MRPL54Q6P161 138 aaKnown RBP-0.87□□□□□ -2.55
COMMD3-211ENST00000472673 NAA60Q9H7X0 242 aa-0.87□□□□□ -2.55
COMMD3-211ENST00000472673 LINC00474Q9P2X8 69 aa-0.87□□□□□ -2.55
COMMD3-211ENST00000472673 FMN2Q9NZ56 1722 aa-0.87□□□□□ -2.55
COMMD3-211ENST00000472673 HYDINQ4G0P3 5121 aa-0.87□□□□□ -2.55
COMMD3-211ENST00000472673 RYR1P21817 5038 aa-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 CPSF1Q10570 1443 aaKnown RBP-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 TNRC18O15417 2968 aaPredicted RBP-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 LINC00959A0A1B0GUT2 108 aa-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 CHKB-CPT1BH3BT56 60 aa-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 C10orf113Q5VZT2 155 aa-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 FDCSPQ8NFU4 85 aa-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 ARL11Q969Q4 196 aa-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 PPP3R2Q96LZ3 170 aa-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 SPANXDQ9BXN6 97 aa-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 MUC17Q685J3 4493 aa-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 PAPPA2Q9BXP8 1791 aa-0.88□□□□□ -2.55
COMMD3-211ENST00000472673 DOPEY1Q5JWR5 2465 aa-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 TULP4Q9NRJ4 1543 aa-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 PHLPP1O60346 1717 aa-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 TRBV7-4A0A0J9YYF1 115 aa-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 MGPP08493 103 aa-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 IGLC1P0CG04 106 aa-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 COX8AP10176 69 aa-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 UBA52P62987 128 aaKnown RBP-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 CATR1Q13166 79 aa-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 TMEM263Q8WUH6 116 aaKnown RBP-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 LINC00470Q9BZP3 86 aa-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 ANKRD11Q6UB99 2663 aaPredicted RBP-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 KIAA0556O60303 1618 aa-0.89□□□□□ -2.55
COMMD3-211ENST00000472673 LOC285095A0A1B0GVY8 99 aa-0.9□□□□□ -2.55
COMMD3-211ENST00000472673 SYS1-DBNDD2H3BUS1 97 aa-0.9□□□□□ -2.55
COMMD3-211ENST00000472673 IFNGP01579 166 aa-0.9□□□□□ -2.55
COMMD3-211ENST00000472673 Q56UQ5 140 aa-0.9□□□□□ -2.55
COMMD3-211ENST00000472673 USMG5Q96IX5 58 aa-0.9□□□□□ -2.55
COMMD3-211ENST00000472673 NXT2Q9NPJ8 142 aaKnown RBP-0.9□□□□□ -2.55
COMMD3-211ENST00000472673 HMGXB3Q12766 1538 aa-0.9□□□□□ -2.55
COMMD3-211ENST00000472673 DNAH9Q9NYC9 4486 aa-0.91□□□□□ -2.55
COMMD3-211ENST00000472673 SETBP1Q9Y6X0 1596 aa-0.91□□□□□ -2.55
COMMD3-211ENST00000472673 FOCADQ5VW36 1801 aa-0.91□□□□□ -2.55
COMMD3-211ENST00000472673 SELENOWP63302 87 aa-0.91□□□□□ -2.56
COMMD3-211ENST00000472673 DEFB112Q30KQ8 113 aa-0.91□□□□□ -2.56
COMMD3-211ENST00000472673 COMMD6Q7Z4G1 85 aa-0.91□□□□□ -2.56
COMMD3-211ENST00000472673 LINC01600Q96MT4 127 aa-0.91□□□□□ -2.56
COMMD3-211ENST00000472673 FAIMQ9NVQ4 179 aa-0.91□□□□□ -2.56
COMMD3-211ENST00000472673 PAIP2BQ9ULR5 123 aaKnown RBP-0.91□□□□□ -2.56
COMMD3-211ENST00000472673 APLNQ9ULZ1 77 aa-0.91□□□□□ -2.56
COMMD3-211ENST00000472673 ARL2-SNX15V9GYD0 113 aa-0.91□□□□□ -2.56
COMMD3-211ENST00000472673 DMXL1Q9Y485 3027 aa-0.91□□□□□ -2.56
COMMD3-211ENST00000472673 ARHGEF5Q12774 1597 aa-0.91□□□□□ -2.56
COMMD3-211ENST00000472673 BIRC6Q9NR09 4857 aa-0.92□□□□□ -2.56
COMMD3-211ENST00000472673 LOC100130705A0A1B0GUX0 176 aa-0.92□□□□□ -2.56
COMMD3-211ENST00000472673 C5orf38Q86SI9 138 aa-0.92□□□□□ -2.56
COMMD3-211ENST00000472673 FAM223AQ8IWN6 122 aa-0.92□□□□□ -2.56
COMMD3-211ENST00000472673 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms