RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 SPANXN5Q5MJ07 72 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 C1orf134Q5TEV5 83 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 Q86TA4 180 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 KRTAP7-1Q8IUC3 87 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 TMEM254Q8TBM7 123 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 TMEM263Q8WUH6 116 aaKnown RBP2.05□□□□□ -2.08
SCN3A-207ENST00000471697 AMELXQ99217 191 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 PROK2Q9HC23 129 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 KIF25-AS1Q9Y6Z4 181 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 NRXN2Q9P2S2 1712 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 PLXNB2O15031 1838 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 ARFGEF3Q5TH69 2177 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 ZNF318Q5VUA4 2279 aa2.05□□□□□ -2.08
SCN3A-207ENST00000471697 IGLV10-54A0A075B6I4 117 aa2.04□□□□□ -2.08
SCN3A-207ENST00000471697 TRBV7-4A0A0J9YYF1 115 aa2.04□□□□□ -2.08
SCN3A-207ENST00000471697 HIGD1CA8MV81 97 aa2.04□□□□□ -2.08
SCN3A-207ENST00000471697 MOBPQ13875 183 aa2.04□□□□□ -2.08
SCN3A-207ENST00000471697 OBSCN-AS1Q96MR7 158 aa2.04□□□□□ -2.08
SCN3A-207ENST00000471697 UBL5Q9BZL1 73 aa2.04□□□□□ -2.08
SCN3A-207ENST00000471697 S4R3C0 116 aa2.04□□□□□ -2.08
SCN3A-207ENST00000471697 PRRC2BQ5JSZ5 2229 aaKnown RBP2.03□□□□□ -2.08
SCN3A-207ENST00000471697 PRR14LQ5THK1 2151 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 DOCK10Q96BY6 2186 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 ESPL1Q14674 2120 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 CR1P17927 2039 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 IGKV1D-42A0A075B6H8 117 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 IGLV4-69A0A075B6H9 119 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 IGHV1-18A0A0C4DH31 117 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 A0A0J9YY99 117 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 A0A1B0GUT8 65 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 F8VRH5 84 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 JMJD7-PLA2G4BH0Y9G9 81 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 Q6ZS52 159 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 MAPK1IP1LQ8NDC0 245 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 CYYR1Q96J86 154 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 FREM1Q5H8C1 2179 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 MED12Q93074 2177 aa2.03□□□□□ -2.08
SCN3A-207ENST00000471697 UTRNP46939 3433 aa2.03□□□□□ -2.09
SCN3A-207ENST00000471697 DNAJC13O75165 2243 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 IGHV3OR16-8A0A075B7F1 116 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 TRAV12-3A0A0B4J271 114 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 IGKV3D-7A0A0C4DH55 119 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 PDE6GP18545 87 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 SPINT3P49223 89 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 RPL38P63173 70 aaKnown RBP2.02□□□□□ -2.09
SCN3A-207ENST00000471697 PDE6HQ13956 83 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 C14orf177Q52M58 125 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 SFTA2Q6UW10 78 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 ZNF833PQ6ZTB9 187 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 LYPD6Q86Y78 171 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 C20orf166-AS1Q96NR2 134 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 Q9BRP9 147 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 ORMDL1Q9P0S3 153 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 TMEM14CQ9P0S9 112 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 LENEPQ9Y5L5 61 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 SPAG17Q6Q759 2223 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 UNC79Q9P2D8 2635 aa2.02□□□□□ -2.09
SCN3A-207ENST00000471697 TRAV40A0A0B4J280 105 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 TRBV6-1A0A0K0K1D8 114 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 HMGN4O00479 90 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 SPINK4O60575 86 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 COX6B1P14854 86 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 MIR22HGQ0VDD5 57 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 KPRPQ5T749 579 aaPredicted RBP2.01□□□□□ -2.09
SCN3A-207ENST00000471697 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 C10orf113Q5VZT2 155 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 LINC00612Q8N6U2 182 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 NDUFA4L2Q9NRX3 87 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 MINOS1-NBL1R4GNA1 71 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 TNCP24821 2201 aa2.01□□□□□ -2.09
SCN3A-207ENST00000471697 COL4A5P29400 1685 aa2□□□□□ -2.09
SCN3A-207ENST00000471697 IGHV3-64A0A075B6Q5 118 aa2□□□□□ -2.09
SCN3A-207ENST00000471697 TRAV10A0A0B4J240 114 aa2□□□□□ -2.09
SCN3A-207ENST00000471697 TRBV10-1A0A0K0K1A3 114 aa2□□□□□ -2.09
SCN3A-207ENST00000471697 H0YGX0 51 aa2□□□□□ -2.09
SCN3A-207ENST00000471697 RTL8CO15255 209 aa2□□□□□ -2.09
SCN3A-207ENST00000471697 CNBPP62633 177 aaKnown RBP2□□□□□ -2.09
SCN3A-207ENST00000471697 LINC00846Q9NV44 126 aa2□□□□□ -2.09
SCN3A-207ENST00000471697 SNURFQ9Y675 71 aa2□□□□□ -2.09
SCN3A-207ENST00000471697 CEP192Q8TEP8 1941 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 IGLV2-18A0A075B6J9 118 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 A0A087WVE0 104 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 TRBV6-5A0A0K0K1A5 114 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 LCE6AA0A183 80 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 IGIPA6NJ69 53 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 I3L3M4 83 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 ARL14EPLP0DKL9 152 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 SPAG11BQ08648 103 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 FXYD3Q14802 87 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 NREPQ16612 68 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 C1orf137Q5JT78 98 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 SPAG11AQ6PDA7 123 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.99□□□□□ -2.09
SCN3A-207ENST00000471697 KLK12Q9UKR0 248 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 LHFPL6Q9Y693 200 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 LINC01558Q9Y6Z2 57 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 CACNA1AO00555 2505 aa1.99□□□□□ -2.09
SCN3A-207ENST00000471697 ALPK2Q86TB3 2170 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms