RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 Q9BRP9 147 aa6.18□□□□□ -1.42
CD47-204ENST00000471694 TRBV6-5A0A0K0K1A5 114 aa6.18□□□□□ -1.42
CD47-204ENST00000471694 MRPL55Q7Z7F7 128 aaKnown RBP6.18□□□□□ -1.42
CD47-204ENST00000471694 TANC2Q9HCD6 1990 aa6.18□□□□□ -1.42
CD47-204ENST00000471694 EGFEM1PQ0D2K5 195 aa6.18□□□□□ -1.42
CD47-204ENST00000471694 UNQ6190/PRO20217Q6UXQ8 127 aa6.17□□□□□ -1.42
CD47-204ENST00000471694 A0A1W2PPR1 153 aa6.17□□□□□ -1.42
CD47-204ENST00000471694 ATOX1O00244 68 aa6.17□□□□□ -1.42
CD47-204ENST00000471694 TTTY13Q9BZ97 58 aa6.17□□□□□ -1.42
CD47-204ENST00000471694 SERP2Q8N6R1 65 aa6.17□□□□□ -1.42
CD47-204ENST00000471694 BDP1A6H8Y1 2624 aa6.17□□□□□ -1.42
CD47-204ENST00000471694 FHL2Q14192 279 aa6.17□□□□□ -1.42
CD47-204ENST00000471694 Q6ZQY7 126 aa6.17□□□□□ -1.42
CD47-204ENST00000471694 LINC00308Q8TCZ7 52 aa6.17□□□□□ -1.42
CD47-204ENST00000471694 PYY3Q5JQD4 70 aa6.16□□□□□ -1.42
CD47-204ENST00000471694 FAM30AQ9NZY2 134 aa6.16□□□□□ -1.42
CD47-204ENST00000471694 K7EP13 123 aa6.16□□□□□ -1.42
CD47-204ENST00000471694 SPINK1P00995 79 aa6.16□□□□□ -1.42
CD47-204ENST00000471694 Q8IZM0 81 aa6.16□□□□□ -1.42
CD47-204ENST00000471694 NOTCH2Q04721 2471 aa6.16□□□□□ -1.42
CD47-204ENST00000471694 ZNF22P17026 224 aaPredicted RBP6.16□□□□□ -1.42
CD47-204ENST00000471694 SPATA3Q8NHX4 192 aa6.16□□□□□ -1.42
CD47-204ENST00000471694 TSHBP01222 138 aa6.16□□□□□ -1.42
CD47-204ENST00000471694 TYMSOSQ8TAI1 123 aa6.16□□□□□ -1.42
CD47-204ENST00000471694 HIVEP3Q5T1R4 2406 aa6.15□□□□□ -1.42
CD47-204ENST00000471694 C9orf116Q5BN46 136 aaPredicted RBP6.15□□□□□ -1.42
CD47-204ENST00000471694 CELA1Q9UNI1 258 aa6.15□□□□□ -1.42
CD47-204ENST00000471694 A8MZ25 164 aa6.15□□□□□ -1.43
CD47-204ENST00000471694 PYGO1Q9Y3Y4 419 aa6.15□□□□□ -1.43
CD47-204ENST00000471694 PRR9Q5T870 116 aa6.14□□□□□ -1.43
CD47-204ENST00000471694 FAM236AA0A1B0GUQ0 79 aa6.14□□□□□ -1.43
CD47-204ENST00000471694 FAM236BA0A1B0GV22 79 aa6.14□□□□□ -1.43
CD47-204ENST00000471694 KLLNB2CW77 178 aa6.14□□□□□ -1.43
CD47-204ENST00000471694 RNASE3P12724 160 aaKnown RBP6.14□□□□□ -1.43
CD47-204ENST00000471694 FAM19A3Q7Z5A8 133 aa6.14□□□□□ -1.43
CD47-204ENST00000471694 CDPF1Q6NVV7 123 aa6.13□□□□□ -1.43
CD47-204ENST00000471694 ENHOQ6UWT2 76 aa6.13□□□□□ -1.43
CD47-204ENST00000471694 NBDYA0A0U1RRE5 68 aa6.13□□□□□ -1.43
CD47-204ENST00000471694 F8WDY8 70 aa6.13□□□□□ -1.43
CD47-204ENST00000471694 TAX1BP3O14907 124 aa6.13□□□□□ -1.43
CD47-204ENST00000471694 CDC42SE2Q9NRR3 84 aa6.13□□□□□ -1.43
CD47-204ENST00000471694 LRP4O75096 1905 aa6.13□□□□□ -1.43
CD47-204ENST00000471694 SONP18583 2426 aaKnown RBP6.12□□□□□ -1.43
CD47-204ENST00000471694 FXYD2P54710 66 aa6.12□□□□□ -1.43
CD47-204ENST00000471694 H3BT86 120 aa6.12□□□□□ -1.43
CD47-204ENST00000471694 P0C879 139 aa6.12□□□□□ -1.43
CD47-204ENST00000471694 ATG2AQ2TAZ0 1938 aa6.12□□□□□ -1.43
CD47-204ENST00000471694 DSCAML1Q8TD84 2053 aa6.12□□□□□ -1.43
CD47-204ENST00000471694 PRLHP81277 87 aa6.12□□□□□ -1.43
CD47-204ENST00000471694 MRPS36P82909 103 aaKnown RBP6.12□□□□□ -1.43
CD47-204ENST00000471694 LINC00315P59091 139 aa6.12□□□□□ -1.43
CD47-204ENST00000471694 Q6JHZ5 121 aa6.12□□□□□ -1.43
CD47-204ENST00000471694 NDUFV3P56181 108 aaKnown RBP6.11□□□□□ -1.43
CD47-204ENST00000471694 NDUFC2-KCTD14E9PQ53 114 aa6.11□□□□□ -1.43
CD47-204ENST00000471694 PTPRSQ13332 1948 aa6.11□□□□□ -1.43
CD47-204ENST00000471694 PRR14LQ5THK1 2151 aa6.11□□□□□ -1.43
CD47-204ENST00000471694 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.11□□□□□ -1.43
CD47-204ENST00000471694 MPLKIPQ8TAP9 179 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 IGLV4-60A0A075B6I1 120 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 NDUFC2O95298 119 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 Q6ZRP5 223 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 RNASE8Q8TDE3 154 aaKnown RBP6.1□□□□□ -1.43
CD47-204ENST00000471694 TRBV10-3A0A0K0K1G6 114 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 HIGD1BQ9P298 99 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 SORL1Q92673 2214 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 TRBV27A0A0K0K1C4 114 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 CHTF8P0CG12 524 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 BRWD1-AS2P59051 145 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 TEN1Q86WV5 123 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 SMIM11BQ8TCY0 68 aa6.1□□□□□ -1.43
CD47-204ENST00000471694 LOC105371267A0A1B0GV96 52 aa6.09□□□□□ -1.43
CD47-204ENST00000471694 CRIP1P50238 77 aa6.09□□□□□ -1.43
CD47-204ENST00000471694 SDIM1Q6ZPB5 146 aa6.09□□□□□ -1.43
CD47-204ENST00000471694 CSPG4Q6UVK1 2322 aa6.09□□□□□ -1.43
CD47-204ENST00000471694 MOBPQ13875 183 aa6.08□□□□□ -1.44
CD47-204ENST00000471694 IGKV2D-30A0A075B6S6 120 aa6.08□□□□□ -1.44
CD47-204ENST00000471694 IGKV2-30P06310 120 aa6.08□□□□□ -1.44
CD47-204ENST00000471694 CRYGAP11844 174 aa6.08□□□□□ -1.44
CD47-204ENST00000471694 ATP11AUNQ6ZP68 121 aa6.08□□□□□ -1.44
CD47-204ENST00000471694 Q6ZRU5 148 aa6.08□□□□□ -1.44
CD47-204ENST00000471694 EIF4EBP1Q13541 118 aaPredicted RBP6.07□□□□□ -1.44
CD47-204ENST00000471694 ACACBO00763 2458 aa6.07□□□□□ -1.44
CD47-204ENST00000471694 C22orf24Q9Y442 160 aa6.07□□□□□ -1.44
CD47-204ENST00000471694 CRIP2P52943 208 aaPredicted RBP6.07□□□□□ -1.44
CD47-204ENST00000471694 SMCR5Q8TEV8 140 aa6.07□□□□□ -1.44
CD47-204ENST00000471694 RNF185Q96GF1 192 aa6.07□□□□□ -1.44
CD47-204ENST00000471694 ARHGAP32A7KAX9 2087 aa6.07□□□□□ -1.44
CD47-204ENST00000471694 Q8N2B8 174 aa6.07□□□□□ -1.44
CD47-204ENST00000471694 CDIP1Q9H305 208 aa6.07□□□□□ -1.44
CD47-204ENST00000471694 BEAN1Q3B7T3 259 aa6.05□□□□□ -1.44
CD47-204ENST00000471694 DEFB116Q30KQ4 102 aa6.05□□□□□ -1.44
CD47-204ENST00000471694 C7orf65Q6ZTY9 151 aa6.05□□□□□ -1.44
CD47-204ENST00000471694 MUC22E2RYF6 1773 aaPredicted RBP6.05□□□□□ -1.44
CD47-204ENST00000471694 C11orf21Q9P2W6 132 aa6.05□□□□□ -1.44
CD47-204ENST00000471694 NUPR1O60356 82 aa6.05□□□□□ -1.44
CD47-204ENST00000471694 SMR3BP02814 79 aaPredicted RBP6.05□□□□□ -1.44
CD47-204ENST00000471694 PRR3P79522 188 aaKnown RBP6.05□□□□□ -1.44
CD47-204ENST00000471694 TIMM17BO60830 172 aa6.04□□□□□ -1.44
CD47-204ENST00000471694 PHF5AQ7RTV0 110 aaKnown RBP6.04□□□□□ -1.44
CD47-204ENST00000471694 TRBV7-6A0A0J9YX20 115 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms