RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 Q6ZUT4 128 aa11.86□□□□□ -0.51
GCFC2-207ENST00000470503 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
GCFC2-207ENST00000470503 MRPL35Q9NZE8 188 aaKnown RBP11.86□□□□□ -0.51
GCFC2-207ENST00000470503 CKS2P33552 79 aa11.85□□□□□ -0.51
GCFC2-207ENST00000470503 C1orf137Q5JT78 98 aa11.85□□□□□ -0.51
GCFC2-207ENST00000470503 DIRC1Q969H9 104 aa11.85□□□□□ -0.51
GCFC2-207ENST00000470503 FAM104AQ969W3 186 aa11.84□□□□□ -0.51
GCFC2-207ENST00000470503 TNFRSF6BO95407 300 aa11.83□□□□□ -0.52
GCFC2-207ENST00000470503 SRSF3P84103 164 aaKnown RBP11.83□□□□□ -0.52
GCFC2-207ENST00000470503 SMDT1Q9H4I9 107 aa11.83□□□□□ -0.52
GCFC2-207ENST00000470503 NDUFA1O15239 70 aa11.82□□□□□ -0.52
GCFC2-207ENST00000470503 TLX1NBP0CAT3 122 aa11.82□□□□□ -0.52
GCFC2-207ENST00000470503 PEA15Q15121 130 aa11.82□□□□□ -0.52
GCFC2-207ENST00000470503 PHF5AQ7RTV0 110 aaKnown RBP11.82□□□□□ -0.52
GCFC2-207ENST00000470503 OPRPNQ99935 248 aaPredicted RBP11.82□□□□□ -0.52
GCFC2-207ENST00000470503 SPANXA1Q9NS26 97 aa11.82□□□□□ -0.52
GCFC2-207ENST00000470503 IGHV3OR16-9A0A0B4J2B5 98 aa11.81□□□□□ -0.52
GCFC2-207ENST00000470503 IGLV7-43P04211 117 aa11.81□□□□□ -0.52
GCFC2-207ENST00000470503 RPL39P62891 51 aaKnown RBP11.81□□□□□ -0.52
GCFC2-207ENST00000470503 SMIM2Q9BVW6 85 aa11.81□□□□□ -0.52
GCFC2-207ENST00000470503 A0A1B0GXF2 115 aa11.8□□□□□ -0.52
GCFC2-207ENST00000470503 MRPS36P82909 103 aaKnown RBP11.8□□□□□ -0.52
GCFC2-207ENST00000470503 ORAOV1Q8WV07 137 aa11.8□□□□□ -0.52
GCFC2-207ENST00000470503 D6R8Y8 96 aa11.79□□□□□ -0.52
GCFC2-207ENST00000470503 F8W036 122 aa11.79□□□□□ -0.52
GCFC2-207ENST00000470503 S100A8P05109 93 aa11.79□□□□□ -0.52
GCFC2-207ENST00000470503 HBBP68871 147 aa11.79□□□□□ -0.52
GCFC2-207ENST00000470503 A0A087WZ39 114 aa11.78□□□□□ -0.52
GCFC2-207ENST00000470503 PPBPP02775 128 aa11.78□□□□□ -0.52
GCFC2-207ENST00000470503 NPYP01303 97 aa11.77□□□□□ -0.53
GCFC2-207ENST00000470503 MRPL54Q6P161 138 aaKnown RBP11.77□□□□□ -0.53
GCFC2-207ENST00000470503 IGLV1-50A0A075B6I6 118 aa11.76□□□□□ -0.53
GCFC2-207ENST00000470503 H0Y9J4 135 aa11.75□□□□□ -0.53
GCFC2-207ENST00000470503 TGIF2-C20orf24A0A0A6YYL0 155 aa11.74□□□□□ -0.53
GCFC2-207ENST00000470503 PRR26Q8N8Z3 221 aa11.74□□□□□ -0.53
GCFC2-207ENST00000470503 IFITM10A6NMD0 228 aa11.73□□□□□ -0.53
GCFC2-207ENST00000470503 ORMDL3Q8N138 153 aa11.73□□□□□ -0.53
GCFC2-207ENST00000470503 PYGO1Q9Y3Y4 419 aa11.73□□□□□ -0.53
GCFC2-207ENST00000470503 TRBV30A0A0K0K1B3 111 aa11.72□□□□□ -0.53
GCFC2-207ENST00000470503 RAB14P61106 215 aa11.72□□□□□ -0.53
GCFC2-207ENST00000470503 C10orf25Q5T742 122 aa11.72□□□□□ -0.53
GCFC2-207ENST00000470503 UNQ6190/PRO20217Q6UXQ8 127 aa11.72□□□□□ -0.53
GCFC2-207ENST00000470503 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
GCFC2-207ENST00000470503 ATP5L2Q7Z4Y8 100 aa11.72□□□□□ -0.53
GCFC2-207ENST00000470503 C6orf48Q9UBA6 75 aa11.72□□□□□ -0.53
GCFC2-207ENST00000470503 PRSS47A8MTI9 375 aa11.71□□□□□ -0.53
GCFC2-207ENST00000470503 RAB5AP20339 215 aa11.71□□□□□ -0.53
GCFC2-207ENST00000470503 IFI27P40305 119 aaPredicted RBP11.71□□□□□ -0.53
GCFC2-207ENST00000470503 FAM168BA1KXE4 195 aa11.7□□□□□ -0.54
GCFC2-207ENST00000470503 RPL13AP40429 203 aaKnown RBP11.7□□□□□ -0.54
GCFC2-207ENST00000470503 KIAA0087Q14695 138 aa11.7□□□□□ -0.54
GCFC2-207ENST00000470503 GAGE2EQ4V326 116 aa11.7□□□□□ -0.54
GCFC2-207ENST00000470503 PRELID3AQ96N28 172 aa11.7□□□□□ -0.54
GCFC2-207ENST00000470503 GAGE2DQ9UEU5 116 aa11.7□□□□□ -0.54
GCFC2-207ENST00000470503 IGLV4-3A0A075B6K6 122 aa11.69□□□□□ -0.54
GCFC2-207ENST00000470503 FAM19A5Q7Z5A7 132 aaPredicted RBP11.69□□□□□ -0.54
GCFC2-207ENST00000470503 LINC01561Q8N1V8 128 aa11.69□□□□□ -0.54
GCFC2-207ENST00000470503 UBE2BP63146 152 aa11.68□□□□□ -0.54
GCFC2-207ENST00000470503 LINC00242Q5T6M2 205 aa11.68□□□□□ -0.54
GCFC2-207ENST00000470503 PACRGQ96M98 296 aaPredicted RBP11.68□□□□□ -0.54
GCFC2-207ENST00000470503 NDUFC2-KCTD14E9PQ53 114 aa11.67□□□□□ -0.54
GCFC2-207ENST00000470503 M0QXV9 152 aa11.67□□□□□ -0.54
GCFC2-207ENST00000470503 KRTAP11-1Q8IUC1 163 aa11.67□□□□□ -0.54
GCFC2-207ENST00000470503 LAMTOR2Q9Y2Q5 125 aa11.67□□□□□ -0.54
GCFC2-207ENST00000470503 CARHSP1Q9Y2V2 147 aaKnown RBP11.67□□□□□ -0.54
GCFC2-207ENST00000470503 LPAP08519 4548 aa11.66□□□□□ -0.54
GCFC2-207ENST00000470503 KRTAP1-4P0C5Y4 121 aa11.66□□□□□ -0.54
GCFC2-207ENST00000470503 UBE2D1P51668 147 aa11.66□□□□□ -0.54
GCFC2-207ENST00000470503 TMEM141Q96I45 108 aa11.66□□□□□ -0.54
GCFC2-207ENST00000470503 KRTAP7-1Q8IUC3 87 aa11.64□□□□□ -0.55
GCFC2-207ENST00000470503 TEX43Q6ZNM6 134 aa11.63□□□□□ -0.55
GCFC2-207ENST00000470503 C2orf88Q9BSF0 95 aa11.63□□□□□ -0.55
GCFC2-207ENST00000470503 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
GCFC2-207ENST00000470503 LOC389332A0A1B0GUA5 103 aa11.62□□□□□ -0.55
GCFC2-207ENST00000470503 CLLU1Q5K131 121 aa11.62□□□□□ -0.55
GCFC2-207ENST00000470503 Q8N8P6 123 aa11.62□□□□□ -0.55
GCFC2-207ENST00000470503 NPSP0C0P6 89 aa11.61□□□□□ -0.55
GCFC2-207ENST00000470503 PNRC1Q12796 327 aaPredicted RBP11.61□□□□□ -0.55
GCFC2-207ENST00000470503 C2orf82Q6UX34 121 aa11.61□□□□□ -0.55
GCFC2-207ENST00000470503 ANAPC16Q96DE5 110 aa11.61□□□□□ -0.55
GCFC2-207ENST00000470503 AMELXQ99217 191 aa11.61□□□□□ -0.55
GCFC2-207ENST00000470503 CYSLTR1Q9Y271 337 aa11.61□□□□□ -0.55
GCFC2-207ENST00000470503 NUPR1O60356 82 aa11.6□□□□□ -0.55
GCFC2-207ENST00000470503 ZNF861PO60384 105 aa11.6□□□□□ -0.55
GCFC2-207ENST00000470503 C9orf129Q5T035 196 aaKnown RBP11.6□□□□□ -0.55
GCFC2-207ENST00000470503 C2orf66Q6UXQ4 117 aa11.6□□□□□ -0.55
GCFC2-207ENST00000470503 Q6ZN92 141 aa11.6□□□□□ -0.55
GCFC2-207ENST00000470503 LINC00173Q6ZV60 143 aa11.6□□□□□ -0.55
GCFC2-207ENST00000470503 MT-ND4LP03901 98 aa11.59□□□□□ -0.55
GCFC2-207ENST00000470503 PRSS2P07478 247 aa11.59□□□□□ -0.55
GCFC2-207ENST00000470503 LBHQ53QV2 105 aaPredicted RBP11.59□□□□□ -0.55
GCFC2-207ENST00000470503 FAM19A3Q7Z5A8 133 aa11.59□□□□□ -0.55
GCFC2-207ENST00000470503 IGIPA6NJ69 53 aa11.58□□□□□ -0.56
GCFC2-207ENST00000470503 K7EMI3 77 aa11.58□□□□□ -0.56
GCFC2-207ENST00000470503 ORMDL2Q53FV1 153 aa11.58□□□□□ -0.56
GCFC2-207ENST00000470503 ZC2HC1BQ5TFG8 222 aa11.58□□□□□ -0.56
GCFC2-207ENST00000470503 VCX2Q9H322 139 aa11.58□□□□□ -0.56
GCFC2-207ENST00000470503 CKS1BP61024 79 aa11.57□□□□□ -0.56
GCFC2-207ENST00000470503 PRR4Q16378 134 aa11.57□□□□□ -0.56
GCFC2-207ENST00000470503 C6orf226Q5I0X4 101 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms