RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 SPAG11BQ08648 103 aa19.42■□□□□ 0.7
HMG20B-209ENST00000470356 SRSF9Q13242 221 aaKnown RBP eCLIP19.42■□□□□ 0.7
HMG20B-209ENST00000470356 OR10D4PQ8NGN7 298 aa19.42■□□□□ 0.7
HMG20B-209ENST00000470356 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.41■□□□□ 0.7
HMG20B-209ENST00000470356 RNF151Q2KHN1 245 aa19.41■□□□□ 0.7
HMG20B-209ENST00000470356 OPRPNQ99935 248 aaPredicted RBP19.41■□□□□ 0.7
HMG20B-209ENST00000470356 IGHV3OR16-9A0A0B4J2B5 98 aa19.4■□□□□ 0.7
HMG20B-209ENST00000470356 A0A1W2PNN7 141 aa19.4■□□□□ 0.7
HMG20B-209ENST00000470356 REG3GQ6UW15 175 aa19.38■□□□□ 0.69
HMG20B-209ENST00000470356 ATP5L2Q7Z4Y8 100 aa19.38■□□□□ 0.69
HMG20B-209ENST00000470356 ORMDL3Q8N138 153 aa19.38■□□□□ 0.69
HMG20B-209ENST00000470356 A0A0J9YXV3 536 aa19.37■□□□□ 0.69
HMG20B-209ENST00000470356 F8WDY8 70 aa19.37■□□□□ 0.69
HMG20B-209ENST00000470356 C9orf116Q5BN46 136 aaPredicted RBP19.36■□□□□ 0.69
HMG20B-209ENST00000470356 ORAOV1Q8WV07 137 aa19.36■□□□□ 0.69
HMG20B-209ENST00000470356 IFITM10A6NMD0 228 aa19.35■□□□□ 0.69
HMG20B-209ENST00000470356 RPL18AQ02543 176 aaKnown RBP19.35■□□□□ 0.69
HMG20B-209ENST00000470356 TMEM136Q6ZRR5 245 aa19.35■□□□□ 0.69
HMG20B-209ENST00000470356 MRPL35Q9NZE8 188 aaKnown RBP19.35■□□□□ 0.69
HMG20B-209ENST00000470356 RAB5AP20339 215 aa19.34■□□□□ 0.69
HMG20B-209ENST00000470356 PRELID3AQ96N28 172 aa19.34■□□□□ 0.69
HMG20B-209ENST00000470356 KRTAP10-8P60410 259 aa19.32■□□□□ 0.68
HMG20B-209ENST00000470356 PYGO1Q9Y3Y4 419 aa19.31■□□□□ 0.68
HMG20B-209ENST00000470356 NDUFA1O15239 70 aa19.3■□□□□ 0.68
HMG20B-209ENST00000470356 IFI27P40305 119 aaPredicted RBP19.3■□□□□ 0.68
HMG20B-209ENST00000470356 IMMP2LQ96T52 175 aa19.3■□□□□ 0.68
HMG20B-209ENST00000470356 PSORS1C2Q9UIG4 136 aa19.29■□□□□ 0.68
HMG20B-209ENST00000470356 PRSS47A8MTI9 375 aa19.28■□□□□ 0.68
HMG20B-209ENST00000470356 TGIF2-C20orf24A0A0A6YYL0 155 aa19.27■□□□□ 0.68
HMG20B-209ENST00000470356 C10orf25Q5T742 122 aa19.27■□□□□ 0.68
HMG20B-209ENST00000470356 LAMTOR2Q9Y2Q5 125 aa19.27■□□□□ 0.68
HMG20B-209ENST00000470356 UNQ6190/PRO20217Q6UXQ8 127 aa19.26■□□□□ 0.67
HMG20B-209ENST00000470356 IGLV4-3A0A075B6K6 122 aa19.25■□□□□ 0.67
HMG20B-209ENST00000470356 A0A087WZ39 114 aa19.25■□□□□ 0.67
HMG20B-209ENST00000470356 MT-ND6P03923 174 aa19.25■□□□□ 0.67
HMG20B-209ENST00000470356 PNRC1Q12796 327 aaPredicted RBP19.25■□□□□ 0.67
HMG20B-209ENST00000470356 PHF5AQ7RTV0 110 aaKnown RBP19.25■□□□□ 0.67
HMG20B-209ENST00000470356 TLX1NBP0CAT3 122 aa19.24■□□□□ 0.67
HMG20B-209ENST00000470356 ODF1Q14990 250 aa19.24■□□□□ 0.67
HMG20B-209ENST00000470356 LINC00242Q5T6M2 205 aa19.24■□□□□ 0.67
HMG20B-209ENST00000470356 TMEM141Q96I45 108 aa19.23■□□□□ 0.67
HMG20B-209ENST00000470356 C6orf48Q9UBA6 75 aa19.23■□□□□ 0.67
HMG20B-209ENST00000470356 LOC389332A0A1B0GUA5 103 aa19.22■□□□□ 0.67
HMG20B-209ENST00000470356 MT-ND4LP03901 98 aa19.22■□□□□ 0.67
HMG20B-209ENST00000470356 ANAPC16Q96DE5 110 aa19.22■□□□□ 0.67
HMG20B-209ENST00000470356 MAP1LC3AQ9H492 121 aa19.22■□□□□ 0.67
HMG20B-209ENST00000470356 KIAA0087Q14695 138 aa19.21■□□□□ 0.67
HMG20B-209ENST00000470356 C1orf137Q5JT78 98 aa19.19■□□□□ 0.66
HMG20B-209ENST00000470356 TEX43Q6ZNM6 134 aa19.19■□□□□ 0.66
HMG20B-209ENST00000470356 Q8N8P6 123 aa19.19■□□□□ 0.66
HMG20B-209ENST00000470356 FAM168BA1KXE4 195 aa19.17■□□□□ 0.66
HMG20B-209ENST00000470356 CYSLTR1Q9Y271 337 aa19.17■□□□□ 0.66
HMG20B-209ENST00000470356 LRP2P98164 4655 aa19.17■□□□□ 0.66
HMG20B-209ENST00000470356 UBE2D1P51668 147 aa19.16■□□□□ 0.66
HMG20B-209ENST00000470356 RAB14P61106 215 aa19.15■□□□□ 0.66
HMG20B-209ENST00000470356 C2orf66Q6UXQ4 117 aa19.15■□□□□ 0.66
HMG20B-209ENST00000470356 LINC01561Q8N1V8 128 aa19.15■□□□□ 0.66
HMG20B-209ENST00000470356 C2orf88Q9BSF0 95 aa19.15■□□□□ 0.66
HMG20B-209ENST00000470356 GAGE2EQ4V326 116 aa19.14■□□□□ 0.65
HMG20B-209ENST00000470356 GAGE2DQ9UEU5 116 aa19.14■□□□□ 0.65
HMG20B-209ENST00000470356 TRBV30A0A0K0K1B3 111 aa19.13■□□□□ 0.65
HMG20B-209ENST00000470356 Q6ZN92 141 aa19.13■□□□□ 0.65
HMG20B-209ENST00000470356 K7EMI3 77 aa19.12■□□□□ 0.65
HMG20B-209ENST00000470356 ORMDL2Q53FV1 153 aa19.12■□□□□ 0.65
HMG20B-209ENST00000470356 AMELXQ99217 191 aa19.12■□□□□ 0.65
HMG20B-209ENST00000470356 IGLV7-43P04211 117 aa19.11■□□□□ 0.65
HMG20B-209ENST00000470356 NPSP0C0P6 89 aa19.11■□□□□ 0.65
HMG20B-209ENST00000470356 C2orf82Q6UX34 121 aa19.11■□□□□ 0.65
HMG20B-209ENST00000470356 LINC00173Q6ZV60 143 aa19.11■□□□□ 0.65
HMG20B-209ENST00000470356 FAM19A5Q7Z5A7 132 aaPredicted RBP19.11■□□□□ 0.65
HMG20B-209ENST00000470356 VCX2Q9H322 139 aa19.11■□□□□ 0.65
HMG20B-209ENST00000470356 ZC2HC1BQ5TFG8 222 aa19.1■□□□□ 0.65
HMG20B-209ENST00000470356 KRTAP11-1Q8IUC1 163 aa19.1■□□□□ 0.65
HMG20B-209ENST00000470356 IGIPA6NJ69 53 aa19.08■□□□□ 0.64
HMG20B-209ENST00000470356 KRTAP7-1Q8IUC3 87 aa19.08■□□□□ 0.64
HMG20B-209ENST00000470356 DIRC1Q969H9 104 aa19.08■□□□□ 0.64
HMG20B-209ENST00000470356 PACRGQ96M98 296 aaPredicted RBP19.08■□□□□ 0.64
HMG20B-209ENST00000470356 NDUFC2-KCTD14E9PQ53 114 aa19.07■□□□□ 0.64
HMG20B-209ENST00000470356 NXT2Q9NPJ8 142 aaKnown RBP19.07■□□□□ 0.64
HMG20B-209ENST00000470356 CTDSP1Q9GZU7 261 aa19.06■□□□□ 0.64
HMG20B-209ENST00000470356 FAM19A3Q7Z5A8 133 aa19.05■□□□□ 0.64
HMG20B-209ENST00000470356 M0QXV9 152 aa19.02■□□□□ 0.64
HMG20B-209ENST00000470356 PRSS2P07478 247 aa19.02■□□□□ 0.64
HMG20B-209ENST00000470356 G0S2P27469 103 aa19.01■□□□□ 0.63
HMG20B-209ENST00000470356 PAPPA-AS1Q5QFB9 102 aa19.01■□□□□ 0.63
HMG20B-209ENST00000470356 C9orf129Q5T035 196 aaKnown RBP19.01■□□□□ 0.63
HMG20B-209ENST00000470356 CLLU1Q5K131 121 aa19■□□□□ 0.63
HMG20B-209ENST00000470356 H0Y9J4 135 aa18.99■□□□□ 0.63
HMG20B-209ENST00000470356 CKS1BP61024 79 aa18.99■□□□□ 0.63
HMG20B-209ENST00000470356 C6orf226Q5I0X4 101 aa18.99■□□□□ 0.63
HMG20B-209ENST00000470356 Q8IZM0 81 aa18.99■□□□□ 0.63
HMG20B-209ENST00000470356 TOMM7Q9P0U1 55 aa18.99■□□□□ 0.63
HMG20B-209ENST00000470356 UBE2BP63146 152 aa18.98■□□□□ 0.63
HMG20B-209ENST00000470356 SEC11AP67812 179 aa18.98■□□□□ 0.63
HMG20B-209ENST00000470356 TIMM17AQ99595 171 aa18.98■□□□□ 0.63
HMG20B-209ENST00000470356 HERVK_113P63121 156 aa18.97■□□□□ 0.63
HMG20B-209ENST00000470356 TOMM6Q96B49 74 aa18.96■□□□□ 0.63
HMG20B-209ENST00000470356 ALKBH7Q9BT30 221 aaPredicted RBP18.96■□□□□ 0.63
HMG20B-209ENST00000470356 CDKN2A-AS1Q9UH64 79 aa18.96■□□□□ 0.63
HMG20B-209ENST00000470356 PRR26Q8N8Z3 221 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms