RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 IMMP2LQ96T52 175 aa5.39□□□□□ -1.55
CCDC171-204ENST00000470191 TRBV6-5A0A0K0K1A5 114 aa5.38□□□□□ -1.55
CCDC171-204ENST00000470191 NDUFA1O15239 70 aa5.38□□□□□ -1.55
CCDC171-204ENST00000470191 FCER1GP30273 86 aa5.38□□□□□ -1.55
CCDC171-204ENST00000470191 CNFNQ9BYD5 112 aa5.38□□□□□ -1.55
CCDC171-204ENST00000470191 BIN3Q9NQY0 253 aa5.38□□□□□ -1.55
CCDC171-204ENST00000470191 CARHSP1Q9Y2V2 147 aaKnown RBP5.38□□□□□ -1.55
CCDC171-204ENST00000470191 SMKR1H3BMG3 65 aa5.37□□□□□ -1.55
CCDC171-204ENST00000470191 OR10D4PQ8NGN7 298 aa5.37□□□□□ -1.55
CCDC171-204ENST00000470191 TYMSOSQ8TAI1 123 aa5.37□□□□□ -1.55
CCDC171-204ENST00000470191 SMIM12Q96EX1 92 aa5.37□□□□□ -1.55
CCDC171-204ENST00000470191 MRPL35Q9NZE8 188 aaKnown RBP5.37□□□□□ -1.55
CCDC171-204ENST00000470191 C6orf48Q9UBA6 75 aa5.37□□□□□ -1.55
CCDC171-204ENST00000470191 UBE2D4Q9Y2X8 147 aa5.37□□□□□ -1.55
CCDC171-204ENST00000470191 A0A087X002 238 aa5.36□□□□□ -1.55
CCDC171-204ENST00000470191 K7EN84 100 aa5.36□□□□□ -1.55
CCDC171-204ENST00000470191 POLR2KP53803 58 aaKnown RBP5.36□□□□□ -1.55
CCDC171-204ENST00000470191 SMDT1Q9H4I9 107 aa5.36□□□□□ -1.55
CCDC171-204ENST00000470191 KANTRA0A1W2PQU2 76 aa5.35□□□□□ -1.55
CCDC171-204ENST00000470191 GATCO43716 136 aaKnown RBP5.35□□□□□ -1.55
CCDC171-204ENST00000470191 PDE6DO43924 150 aa5.35□□□□□ -1.55
CCDC171-204ENST00000470191 ZNF861PO60384 105 aa5.35□□□□□ -1.55
CCDC171-204ENST00000470191 OCC1Q8TAD7 63 aa5.35□□□□□ -1.55
CCDC171-204ENST00000470191 ANAPC11Q9NYG5 84 aa5.35□□□□□ -1.55
CCDC171-204ENST00000470191 CRCT1Q9UGL9 99 aa5.35□□□□□ -1.55
CCDC171-204ENST00000470191 TRBV27A0A0K0K1C4 114 aa5.34□□□□□ -1.55
CCDC171-204ENST00000470191 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
CCDC171-204ENST00000470191 SMAGPQ0VAQ4 97 aa5.34□□□□□ -1.55
CCDC171-204ENST00000470191 BORCS7Q96B45 105 aa5.34□□□□□ -1.55
CCDC171-204ENST00000470191 TEX46H3BTG2 121 aa5.33□□□□□ -1.56
CCDC171-204ENST00000470191 VCYO14598 125 aa5.33□□□□□ -1.56
CCDC171-204ENST00000470191 CRYGAP11844 174 aa5.33□□□□□ -1.56
CCDC171-204ENST00000470191 RAB4AP20338 218 aa5.33□□□□□ -1.56
CCDC171-204ENST00000470191 RPL39P62891 51 aaKnown RBP5.33□□□□□ -1.56
CCDC171-204ENST00000470191 TMEM241Q24JQ0 296 aa5.33□□□□□ -1.56
CCDC171-204ENST00000470191 C9orf129Q5T035 196 aaKnown RBP5.33□□□□□ -1.56
CCDC171-204ENST00000470191 C2orf82Q6UX34 121 aa5.33□□□□□ -1.56
CCDC171-204ENST00000470191 AMN1Q8IY45 258 aa5.33□□□□□ -1.56
CCDC171-204ENST00000470191 LINC00469Q8N7U9 141 aa5.33□□□□□ -1.56
CCDC171-204ENST00000470191 CTDSP1Q9GZU7 261 aa5.33□□□□□ -1.56
CCDC171-204ENST00000470191 A8MWL6 223 aa5.32□□□□□ -1.56
CCDC171-204ENST00000470191 F8WDY8 70 aa5.32□□□□□ -1.56
CCDC171-204ENST00000470191 ZNF345Q14585 488 aa5.32□□□□□ -1.56
CCDC171-204ENST00000470191 KIR2DL4Q99706 377 aa5.32□□□□□ -1.56
CCDC171-204ENST00000470191 CSDC2Q9Y534 153 aaKnown RBP5.32□□□□□ -1.56
CCDC171-204ENST00000470191 IGLV7-46A0A075B6I9 117 aa5.31□□□□□ -1.56
CCDC171-204ENST00000470191 IGHV3OR16-9A0A0B4J2B5 98 aa5.31□□□□□ -1.56
CCDC171-204ENST00000470191 IFITM10A6NMD0 228 aa5.31□□□□□ -1.56
CCDC171-204ENST00000470191 LINC00173Q6ZV60 143 aa5.31□□□□□ -1.56
CCDC171-204ENST00000470191 TMEM18Q96B42 140 aa5.31□□□□□ -1.56
CCDC171-204ENST00000470191 FAM210AQ96ND0 272 aa5.31□□□□□ -1.56
CCDC171-204ENST00000470191 TMEM191AQ9H0A3 160 aa5.31□□□□□ -1.56
CCDC171-204ENST00000470191 TGIF2-C20orf24A0A0A6YYL0 155 aa5.3□□□□□ -1.56
CCDC171-204ENST00000470191 A0A1B0GUT8 65 aa5.3□□□□□ -1.56
CCDC171-204ENST00000470191 NDUFC2-KCTD14E9PQ53 114 aa5.3□□□□□ -1.56
CCDC171-204ENST00000470191 NUPR1O60356 82 aa5.3□□□□□ -1.56
CCDC171-204ENST00000470191 CEBPGP53567 150 aa5.3□□□□□ -1.56
CCDC171-204ENST00000470191 LINC01547P58512 204 aaPredicted RBP5.3□□□□□ -1.56
CCDC171-204ENST00000470191 SUMO2P61956 95 aaKnown RBP5.3□□□□□ -1.56
CCDC171-204ENST00000470191 KRTAP13-2Q52LG2 175 aa5.3□□□□□ -1.56
CCDC171-204ENST00000470191 LINC00242Q5T6M2 205 aa5.3□□□□□ -1.56
CCDC171-204ENST00000470191 PACRGQ96M98 296 aaPredicted RBP5.3□□□□□ -1.56
CCDC171-204ENST00000470191 C22orf24Q9Y442 160 aa5.3□□□□□ -1.56
CCDC171-204ENST00000470191 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
CCDC171-204ENST00000470191 HIGD1CA8MV81 97 aa5.29□□□□□ -1.56
CCDC171-204ENST00000470191 RPL28P46779 137 aaKnown RBP5.29□□□□□ -1.56
CCDC171-204ENST00000470191 KIAA0087Q14695 138 aa5.29□□□□□ -1.56
CCDC171-204ENST00000470191 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
CCDC171-204ENST00000470191 NRACQ8N912 160 aa5.29□□□□□ -1.56
CCDC171-204ENST00000470191 LINC00304Q8N9R0 145 aa5.29□□□□□ -1.56
CCDC171-204ENST00000470191 FAM104AQ969W3 186 aa5.29□□□□□ -1.56
CCDC171-204ENST00000470191 TIMM21Q9BVV7 248 aa5.29□□□□□ -1.56
CCDC171-204ENST00000470191 XAGE1AQ9HD64 81 aa5.29□□□□□ -1.56
CCDC171-204ENST00000470191 TRBV30A0A0K0K1B3 111 aa5.28□□□□□ -1.56
CCDC171-204ENST00000470191 RPL37AP8A6NKH3 93 aa5.28□□□□□ -1.56
CCDC171-204ENST00000470191 HBBP68871 147 aa5.28□□□□□ -1.56
CCDC171-204ENST00000470191 TOMM7Q9P0U1 55 aa5.28□□□□□ -1.56
CCDC171-204ENST00000470191 HMSDA8MTL9 139 aa5.27□□□□□ -1.57
CCDC171-204ENST00000470191 BCE1O60756 84 aa5.27□□□□□ -1.57
CCDC171-204ENST00000470191 SRSF3P84103 164 aaKnown RBP5.27□□□□□ -1.57
CCDC171-204ENST00000470191 LBHQ53QV2 105 aaPredicted RBP5.27□□□□□ -1.57
CCDC171-204ENST00000470191 FAM231DQ6ZW35 169 aa5.27□□□□□ -1.57
CCDC171-204ENST00000470191 PPDPFQ9H3Y8 114 aa5.27□□□□□ -1.57
CCDC171-204ENST00000470191 GAGE10A6NGK3 116 aa5.26□□□□□ -1.57
CCDC171-204ENST00000470191 ZNF727A8MUV8 499 aa5.26□□□□□ -1.57
CCDC171-204ENST00000470191 PPP1R2P9O14990 202 aa5.26□□□□□ -1.57
CCDC171-204ENST00000470191 TCAPO15273 167 aa5.26□□□□□ -1.57
CCDC171-204ENST00000470191 PPP1R17O96001 155 aa5.26□□□□□ -1.57
CCDC171-204ENST00000470191 MRPL51Q4U2R6 128 aaKnown RBP5.26□□□□□ -1.57
CCDC171-204ENST00000470191 SPANXA1Q9NS26 97 aa5.26□□□□□ -1.57
CCDC171-204ENST00000470191 IGKV2D-26A0A0A0MRZ7 120 aa5.25□□□□□ -1.57
CCDC171-204ENST00000470191 PRSS2P07478 247 aa5.25□□□□□ -1.57
CCDC171-204ENST00000470191 UBE2AP49459 152 aa5.25□□□□□ -1.57
CCDC171-204ENST00000470191 RIGQ13278 110 aa5.25□□□□□ -1.57
CCDC171-204ENST00000470191 CT83Q5H943 113 aa5.25□□□□□ -1.57
CCDC171-204ENST00000470191 MRPL55Q7Z7F7 128 aaKnown RBP5.25□□□□□ -1.57
CCDC171-204ENST00000470191 BATF3Q9NR55 127 aa5.25□□□□□ -1.57
CCDC171-204ENST00000470191 CKS2P33552 79 aa5.24□□□□□ -1.57
CCDC171-204ENST00000470191 CKS1BP61024 79 aa5.24□□□□□ -1.57
CCDC171-204ENST00000470191 MRPS36P82909 103 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms