RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 F8WDY8 70 aa10.77□□□□□ -0.69
COL7A1-208ENST00000470076 ODF1Q14990 250 aa10.77□□□□□ -0.69
COL7A1-208ENST00000470076 D6R8Y8 96 aa10.76□□□□□ -0.69
COL7A1-208ENST00000470076 MT-ND6P03923 174 aa10.76□□□□□ -0.69
COL7A1-208ENST00000470076 HBBP68871 147 aa10.76□□□□□ -0.69
COL7A1-208ENST00000470076 MRPS36P82909 103 aaKnown RBP10.76□□□□□ -0.69
COL7A1-208ENST00000470076 PEA15Q15121 130 aa10.76□□□□□ -0.69
COL7A1-208ENST00000470076 ORAOV1Q8WV07 137 aa10.76□□□□□ -0.69
COL7A1-208ENST00000470076 FAM104AQ969W3 186 aa10.76□□□□□ -0.69
COL7A1-208ENST00000470076 OPRPNQ99935 248 aaPredicted RBP10.76□□□□□ -0.69
COL7A1-208ENST00000470076 SMDT1Q9H4I9 107 aa10.76□□□□□ -0.69
COL7A1-208ENST00000470076 MRPL35Q9NZE8 188 aaKnown RBP10.76□□□□□ -0.69
COL7A1-208ENST00000470076 PSORS1C2Q9UIG4 136 aa10.76□□□□□ -0.69
COL7A1-208ENST00000470076 IGHV3OR16-9A0A0B4J2B5 98 aa10.75□□□□□ -0.69
COL7A1-208ENST00000470076 PPBPP02775 128 aa10.75□□□□□ -0.69
COL7A1-208ENST00000470076 MRPL54Q6P161 138 aaKnown RBP10.75□□□□□ -0.69
COL7A1-208ENST00000470076 IMMP2LQ96T52 175 aa10.75□□□□□ -0.69
COL7A1-208ENST00000470076 SRSF3P84103 164 aaKnown RBP10.74□□□□□ -0.69
COL7A1-208ENST00000470076 A0A1B0GVG6 124 aa10.73□□□□□ -0.69
COL7A1-208ENST00000470076 A0A1B0GXF2 115 aa10.73□□□□□ -0.69
COL7A1-208ENST00000470076 IFITM10A6NMD0 228 aa10.73□□□□□ -0.69
COL7A1-208ENST00000470076 NDUFA1O15239 70 aa10.73□□□□□ -0.69
COL7A1-208ENST00000470076 NPYP01303 97 aa10.73□□□□□ -0.69
COL7A1-208ENST00000470076 PHF5AQ7RTV0 110 aaKnown RBP10.73□□□□□ -0.69
COL7A1-208ENST00000470076 C1orf137Q5JT78 98 aa10.72□□□□□ -0.69
COL7A1-208ENST00000470076 RNF213Q63HN8 5207 aa10.72□□□□□ -0.69
COL7A1-208ENST00000470076 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
COL7A1-208ENST00000470076 TLX1NBP0CAT3 122 aa10.7□□□□□ -0.7
COL7A1-208ENST00000470076 RAB5AP20339 215 aa10.7□□□□□ -0.7
COL7A1-208ENST00000470076 IFI27P40305 119 aaPredicted RBP10.7□□□□□ -0.7
COL7A1-208ENST00000470076 ORMDL3Q8N138 153 aa10.7□□□□□ -0.7
COL7A1-208ENST00000470076 C10orf25Q5T742 122 aa10.69□□□□□ -0.7
COL7A1-208ENST00000470076 ATP5L2Q7Z4Y8 100 aa10.69□□□□□ -0.7
COL7A1-208ENST00000470076 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
COL7A1-208ENST00000470076 A0A087WZ39 114 aa10.68□□□□□ -0.7
COL7A1-208ENST00000470076 UNQ6190/PRO20217Q6UXQ8 127 aa10.68□□□□□ -0.7
COL7A1-208ENST00000470076 TMEM136Q6ZRR5 245 aa10.68□□□□□ -0.7
COL7A1-208ENST00000470076 PRELID3AQ96N28 172 aa10.68□□□□□ -0.7
COL7A1-208ENST00000470076 C6orf48Q9UBA6 75 aa10.68□□□□□ -0.7
COL7A1-208ENST00000470076 DIRC1Q969H9 104 aa10.67□□□□□ -0.7
COL7A1-208ENST00000470076 FAM168BA1KXE4 195 aa10.66□□□□□ -0.7
COL7A1-208ENST00000470076 IGLV7-43P04211 117 aa10.66□□□□□ -0.7
COL7A1-208ENST00000470076 IGLV4-3A0A075B6K6 122 aa10.65□□□□□ -0.7
COL7A1-208ENST00000470076 KIAA0087Q14695 138 aa10.65□□□□□ -0.7
COL7A1-208ENST00000470076 LINC00242Q5T6M2 205 aa10.65□□□□□ -0.7
COL7A1-208ENST00000470076 TMEM141Q96I45 108 aa10.65□□□□□ -0.7
COL7A1-208ENST00000470076 LAMTOR2Q9Y2Q5 125 aa10.65□□□□□ -0.7
COL7A1-208ENST00000470076 PRSS47A8MTI9 375 aa10.64□□□□□ -0.71
COL7A1-208ENST00000470076 GAGE2EQ4V326 116 aa10.64□□□□□ -0.71
COL7A1-208ENST00000470076 FAM19A5Q7Z5A7 132 aaPredicted RBP10.64□□□□□ -0.71
COL7A1-208ENST00000470076 GAGE2DQ9UEU5 116 aa10.64□□□□□ -0.71
COL7A1-208ENST00000470076 TRBV30A0A0K0K1B3 111 aa10.63□□□□□ -0.71
COL7A1-208ENST00000470076 TEX43Q6ZNM6 134 aa10.63□□□□□ -0.71
COL7A1-208ENST00000470076 H0Y9J4 135 aa10.62□□□□□ -0.71
COL7A1-208ENST00000470076 KRTAP11-1Q8IUC1 163 aa10.62□□□□□ -0.71
COL7A1-208ENST00000470076 LINC01561Q8N1V8 128 aa10.62□□□□□ -0.71
COL7A1-208ENST00000470076 MAP1LC3AQ9H492 121 aa10.62□□□□□ -0.71
COL7A1-208ENST00000470076 LOC389332A0A1B0GUA5 103 aa10.61□□□□□ -0.71
COL7A1-208ENST00000470076 NDUFC2-KCTD14E9PQ53 114 aa10.61□□□□□ -0.71
COL7A1-208ENST00000470076 UBE2D1P51668 147 aa10.61□□□□□ -0.71
COL7A1-208ENST00000470076 PACRGQ96M98 296 aaPredicted RBP10.61□□□□□ -0.71
COL7A1-208ENST00000470076 C2orf88Q9BSF0 95 aa10.61□□□□□ -0.71
COL7A1-208ENST00000470076 CYSLTR1Q9Y271 337 aa10.61□□□□□ -0.71
COL7A1-208ENST00000470076 M0QXV9 152 aa10.6□□□□□ -0.71
COL7A1-208ENST00000470076 C2orf82Q6UX34 121 aa10.6□□□□□ -0.71
COL7A1-208ENST00000470076 Q6ZN92 141 aa10.6□□□□□ -0.71
COL7A1-208ENST00000470076 PRR26Q8N8Z3 221 aa10.6□□□□□ -0.71
COL7A1-208ENST00000470076 UBE2BP63146 152 aa10.59□□□□□ -0.71
COL7A1-208ENST00000470076 PNRC1Q12796 327 aaPredicted RBP10.59□□□□□ -0.71
COL7A1-208ENST00000470076 C2orf66Q6UXQ4 117 aa10.59□□□□□ -0.71
COL7A1-208ENST00000470076 KRTAP7-1Q8IUC3 87 aa10.59□□□□□ -0.71
COL7A1-208ENST00000470076 Q8N8P6 123 aa10.59□□□□□ -0.71
COL7A1-208ENST00000470076 NPSP0C0P6 89 aa10.58□□□□□ -0.72
COL7A1-208ENST00000470076 ANAPC16Q96DE5 110 aa10.58□□□□□ -0.72
COL7A1-208ENST00000470076 VCX2Q9H322 139 aa10.58□□□□□ -0.72
COL7A1-208ENST00000470076 IGLV1-50A0A075B6I6 118 aa10.57□□□□□ -0.72
COL7A1-208ENST00000470076 K7EMI3 77 aa10.57□□□□□ -0.72
COL7A1-208ENST00000470076 MT-ND4LP03901 98 aa10.57□□□□□ -0.72
COL7A1-208ENST00000470076 ORMDL2Q53FV1 153 aa10.57□□□□□ -0.72
COL7A1-208ENST00000470076 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
COL7A1-208ENST00000470076 AMELXQ99217 191 aa10.57□□□□□ -0.72
COL7A1-208ENST00000470076 PRSS2P07478 247 aa10.56□□□□□ -0.72
COL7A1-208ENST00000470076 C9orf129Q5T035 196 aaKnown RBP10.56□□□□□ -0.72
COL7A1-208ENST00000470076 CKS1BP61024 79 aa10.55□□□□□ -0.72
COL7A1-208ENST00000470076 ZC2HC1BQ5TFG8 222 aa10.55□□□□□ -0.72
COL7A1-208ENST00000470076 FAM19A3Q7Z5A8 133 aa10.55□□□□□ -0.72
COL7A1-208ENST00000470076 KRTAP1-4P0C5Y4 121 aa10.54□□□□□ -0.72
COL7A1-208ENST00000470076 TOMM7Q9P0U1 55 aa10.54□□□□□ -0.72
COL7A1-208ENST00000470076 IGIPA6NJ69 53 aa10.53□□□□□ -0.72
COL7A1-208ENST00000470076 C6orf226Q5I0X4 101 aa10.53□□□□□ -0.72
COL7A1-208ENST00000470076 Q8IZM0 81 aa10.53□□□□□ -0.72
COL7A1-208ENST00000470076 NXT2Q9NPJ8 142 aaKnown RBP10.53□□□□□ -0.72
COL7A1-208ENST00000470076 LPAP08519 4548 aa10.53□□□□□ -0.72
COL7A1-208ENST00000470076 G0S2P27469 103 aa10.52□□□□□ -0.73
COL7A1-208ENST00000470076 SEC11AP67812 179 aa10.52□□□□□ -0.73
COL7A1-208ENST00000470076 PAPPA-AS1Q5QFB9 102 aa10.52□□□□□ -0.73
COL7A1-208ENST00000470076 ALKBH7Q9BT30 221 aaPredicted RBP10.52□□□□□ -0.73
COL7A1-208ENST00000470076 HERVK_113P63121 156 aa10.51□□□□□ -0.73
COL7A1-208ENST00000470076 RPL13AP40429 203 aaKnown RBP10.5□□□□□ -0.73
COL7A1-208ENST00000470076 CTDSP1Q9GZU7 261 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms