RNA–Protein interactions for RNA: ENST00000468654.1

SHANK1-206, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 668 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-206ENST00000468654 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.07□□□□□ -0.32
SHANK1-206ENST00000468654 PPBPP02775 128 aa13.07□□□□□ -0.32
SHANK1-206ENST00000468654 MRPS36P82909 103 aaKnown RBP13.07□□□□□ -0.32
SHANK1-206ENST00000468654 SPINK6Q6UWN8 80 aa13.07□□□□□ -0.32
SHANK1-206ENST00000468654 OR10D4PQ8NGN7 298 aa13.07□□□□□ -0.32
SHANK1-206ENST00000468654 IGHV3OR16-9A0A0B4J2B5 98 aa13.05□□□□□ -0.32
SHANK1-206ENST00000468654 A0A1W2PNN7 141 aa13.05□□□□□ -0.32
SHANK1-206ENST00000468654 ODF1Q14990 250 aa13.05□□□□□ -0.32
SHANK1-206ENST00000468654 ATP5L2Q7Z4Y8 100 aa13.05□□□□□ -0.32
SHANK1-206ENST00000468654 OPRPNQ99935 248 aaPredicted RBP13.05□□□□□ -0.32
SHANK1-206ENST00000468654 RPL18AQ02543 176 aaKnown RBP13.04□□□□□ -0.32
SHANK1-206ENST00000468654 SRSF9Q13242 221 aaKnown RBP eCLIP13.04□□□□□ -0.32
SHANK1-206ENST00000468654 RNF151Q2KHN1 245 aa13.04□□□□□ -0.32
SHANK1-206ENST00000468654 A0A0J9YXV3 536 aa13.03□□□□□ -0.32
SHANK1-206ENST00000468654 IFITM10A6NMD0 228 aa13.03□□□□□ -0.32
SHANK1-206ENST00000468654 REG3GQ6UW15 175 aa13.03□□□□□ -0.32
SHANK1-206ENST00000468654 ORMDL3Q8N138 153 aa13.03□□□□□ -0.32
SHANK1-206ENST00000468654 ORAOV1Q8WV07 137 aa13.03□□□□□ -0.32
SHANK1-206ENST00000468654 C9orf116Q5BN46 136 aaPredicted RBP13.02□□□□□ -0.33
SHANK1-206ENST00000468654 MRPL35Q9NZE8 188 aaKnown RBP13.02□□□□□ -0.33
SHANK1-206ENST00000468654 F8WDY8 70 aa13.01□□□□□ -0.33
SHANK1-206ENST00000468654 TMEM136Q6ZRR5 245 aa13□□□□□ -0.33
SHANK1-206ENST00000468654 PRELID3AQ96N28 172 aa13□□□□□ -0.33
SHANK1-206ENST00000468654 NDUFA1O15239 70 aa12.98□□□□□ -0.33
SHANK1-206ENST00000468654 RAB5AP20339 215 aa12.98□□□□□ -0.33
SHANK1-206ENST00000468654 IFI27P40305 119 aaPredicted RBP12.98□□□□□ -0.33
SHANK1-206ENST00000468654 KRTAP10-8P60410 259 aa12.98□□□□□ -0.33
SHANK1-206ENST00000468654 PYGO1Q9Y3Y4 419 aa12.98□□□□□ -0.33
SHANK1-206ENST00000468654 PSORS1C2Q9UIG4 136 aa12.97□□□□□ -0.33
SHANK1-206ENST00000468654 IGLV4-3A0A075B6K6 122 aa12.96□□□□□ -0.33
SHANK1-206ENST00000468654 TGIF2-C20orf24A0A0A6YYL0 155 aa12.96□□□□□ -0.33
SHANK1-206ENST00000468654 PRSS47A8MTI9 375 aa12.96□□□□□ -0.33
SHANK1-206ENST00000468654 C10orf25Q5T742 122 aa12.96□□□□□ -0.33
SHANK1-206ENST00000468654 IMMP2LQ96T52 175 aa12.96□□□□□ -0.33
SHANK1-206ENST00000468654 LAMTOR2Q9Y2Q5 125 aa12.96□□□□□ -0.33
SHANK1-206ENST00000468654 TLX1NBP0CAT3 122 aa12.95□□□□□ -0.34
SHANK1-206ENST00000468654 PNRC1Q12796 327 aaPredicted RBP12.95□□□□□ -0.34
SHANK1-206ENST00000468654 PHF5AQ7RTV0 110 aaKnown RBP12.95□□□□□ -0.34
SHANK1-206ENST00000468654 A0A087WZ39 114 aa12.94□□□□□ -0.34
SHANK1-206ENST00000468654 MT-ND6P03923 174 aa12.94□□□□□ -0.34
SHANK1-206ENST00000468654 UNQ6190/PRO20217Q6UXQ8 127 aa12.94□□□□□ -0.34
SHANK1-206ENST00000468654 TMEM141Q96I45 108 aa12.94□□□□□ -0.34
SHANK1-206ENST00000468654 C6orf48Q9UBA6 75 aa12.94□□□□□ -0.34
SHANK1-206ENST00000468654 KIAA0087Q14695 138 aa12.93□□□□□ -0.34
SHANK1-206ENST00000468654 LINC00242Q5T6M2 205 aa12.93□□□□□ -0.34
SHANK1-206ENST00000468654 MAP1LC3AQ9H492 121 aa12.93□□□□□ -0.34
SHANK1-206ENST00000468654 ANAPC16Q96DE5 110 aa12.92□□□□□ -0.34
SHANK1-206ENST00000468654 LOC389332A0A1B0GUA5 103 aa12.91□□□□□ -0.34
SHANK1-206ENST00000468654 MT-ND4LP03901 98 aa12.9□□□□□ -0.34
SHANK1-206ENST00000468654 UBE2D1P51668 147 aa12.9□□□□□ -0.34
SHANK1-206ENST00000468654 C1orf137Q5JT78 98 aa12.9□□□□□ -0.34
SHANK1-206ENST00000468654 TEX43Q6ZNM6 134 aa12.9□□□□□ -0.34
SHANK1-206ENST00000468654 Q8N8P6 123 aa12.9□□□□□ -0.34
SHANK1-206ENST00000468654 CYSLTR1Q9Y271 337 aa12.9□□□□□ -0.34
SHANK1-206ENST00000468654 FAM168BA1KXE4 195 aa12.89□□□□□ -0.35
SHANK1-206ENST00000468654 C2orf66Q6UXQ4 117 aa12.88□□□□□ -0.35
SHANK1-206ENST00000468654 LINC00173Q6ZV60 143 aa12.88□□□□□ -0.35
SHANK1-206ENST00000468654 LINC01561Q8N1V8 128 aa12.88□□□□□ -0.35
SHANK1-206ENST00000468654 TRBV30A0A0K0K1B3 111 aa12.87□□□□□ -0.35
SHANK1-206ENST00000468654 AMELXQ99217 191 aa12.87□□□□□ -0.35
SHANK1-206ENST00000468654 C2orf88Q9BSF0 95 aa12.87□□□□□ -0.35
SHANK1-206ENST00000468654 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
SHANK1-206ENST00000468654 ORMDL2Q53FV1 153 aa12.86□□□□□ -0.35
SHANK1-206ENST00000468654 Q6ZN92 141 aa12.86□□□□□ -0.35
SHANK1-206ENST00000468654 FAM19A5Q7Z5A7 132 aaPredicted RBP12.86□□□□□ -0.35
SHANK1-206ENST00000468654 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
SHANK1-206ENST00000468654 K7EMI3 77 aa12.85□□□□□ -0.35
SHANK1-206ENST00000468654 NPSP0C0P6 89 aa12.85□□□□□ -0.35
SHANK1-206ENST00000468654 RAB14P61106 215 aa12.85□□□□□ -0.35
SHANK1-206ENST00000468654 ZC2HC1BQ5TFG8 222 aa12.85□□□□□ -0.35
SHANK1-206ENST00000468654 C2orf82Q6UX34 121 aa12.85□□□□□ -0.35
SHANK1-206ENST00000468654 KRTAP11-1Q8IUC1 163 aa12.85□□□□□ -0.35
SHANK1-206ENST00000468654 IGLV7-43P04211 117 aa12.84□□□□□ -0.35
SHANK1-206ENST00000468654 KRTAP7-1Q8IUC3 87 aa12.84□□□□□ -0.35
SHANK1-206ENST00000468654 IGIPA6NJ69 53 aa12.83□□□□□ -0.36
SHANK1-206ENST00000468654 NDUFC2-KCTD14E9PQ53 114 aa12.83□□□□□ -0.36
SHANK1-206ENST00000468654 PACRGQ96M98 296 aaPredicted RBP12.83□□□□□ -0.36
SHANK1-206ENST00000468654 VCX2Q9H322 139 aa12.83□□□□□ -0.36
SHANK1-206ENST00000468654 FAM19A3Q7Z5A8 133 aa12.82□□□□□ -0.36
SHANK1-206ENST00000468654 DIRC1Q969H9 104 aa12.82□□□□□ -0.36
SHANK1-206ENST00000468654 NXT2Q9NPJ8 142 aaKnown RBP12.82□□□□□ -0.36
SHANK1-206ENST00000468654 M0QXV9 152 aa12.81□□□□□ -0.36
SHANK1-206ENST00000468654 CTDSP1Q9GZU7 261 aa12.8□□□□□ -0.36
SHANK1-206ENST00000468654 H0Y9J4 135 aa12.79□□□□□ -0.36
SHANK1-206ENST00000468654 C9orf129Q5T035 196 aaKnown RBP12.79□□□□□ -0.36
SHANK1-206ENST00000468654 PRSS2P07478 247 aa12.78□□□□□ -0.36
SHANK1-206ENST00000468654 CLLU1Q5K131 121 aa12.78□□□□□ -0.36
SHANK1-206ENST00000468654 LPAP08519 4548 aa12.77□□□□□ -0.36
SHANK1-206ENST00000468654 PAPPA-AS1Q5QFB9 102 aa12.77□□□□□ -0.37
SHANK1-206ENST00000468654 Q8IZM0 81 aa12.77□□□□□ -0.37
SHANK1-206ENST00000468654 TIMM17AQ99595 171 aa12.77□□□□□ -0.37
SHANK1-206ENST00000468654 TOMM7Q9P0U1 55 aa12.77□□□□□ -0.37
SHANK1-206ENST00000468654 ADCYAP1P18509 176 aa12.76□□□□□ -0.37
SHANK1-206ENST00000468654 HERVK_113P63121 156 aa12.76□□□□□ -0.37
SHANK1-206ENST00000468654 UBE2BP63146 152 aa12.76□□□□□ -0.37
SHANK1-206ENST00000468654 G0S2P27469 103 aa12.75□□□□□ -0.37
SHANK1-206ENST00000468654 CKS1BP61024 79 aa12.75□□□□□ -0.37
SHANK1-206ENST00000468654 SEC11AP67812 179 aa12.75□□□□□ -0.37
SHANK1-206ENST00000468654 PRR26Q8N8Z3 221 aa12.75□□□□□ -0.37
SHANK1-206ENST00000468654 TOMM6Q96B49 74 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms