RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 CCL25O15444 150 aa8.75□□□□□ -1.01
COL4A1-202ENST00000467182 SS18Q15532 418 aa8.75□□□□□ -1.01
COL4A1-202ENST00000467182 KRTAP26-1Q6PEX3 210 aa8.75□□□□□ -1.01
COL4A1-202ENST00000467182 LINC00469Q8N7U9 141 aa8.75□□□□□ -1.01
COL4A1-202ENST00000467182 GEMIN7Q9H840 131 aaKnown RBP8.75□□□□□ -1.01
COL4A1-202ENST00000467182 CHCHD10Q8WYQ3 142 aaPredicted RBP8.74□□□□□ -1.01
COL4A1-202ENST00000467182 Q9H8V8 135 aa8.74□□□□□ -1.01
COL4A1-202ENST00000467182 TP73-AS1Q9UF72 201 aa8.74□□□□□ -1.01
COL4A1-202ENST00000467182 ALMS1Q8TCU4 4167 aa8.74□□□□□ -1.01
COL4A1-202ENST00000467182 TRAV8-3A0A0A6YYJ7 113 aa8.73□□□□□ -1.01
COL4A1-202ENST00000467182 SMIM1B2RUZ4 78 aa8.73□□□□□ -1.01
COL4A1-202ENST00000467182 SPINK8P0C7L1 97 aa8.73□□□□□ -1.01
COL4A1-202ENST00000467182 TSPEAR-AS2P59090 65 aa8.73□□□□□ -1.01
COL4A1-202ENST00000467182 FOXI1Q12951 378 aa8.73□□□□□ -1.01
COL4A1-202ENST00000467182 PCP2Q8IVA1 136 aa8.73□□□□□ -1.01
COL4A1-202ENST00000467182 UBE2WQ96B02 151 aa8.73□□□□□ -1.01
COL4A1-202ENST00000467182 C14orf144Q96I85 54 aa8.73□□□□□ -1.01
COL4A1-202ENST00000467182 DNAH6Q9C0G6 4158 aa8.73□□□□□ -1.01
COL4A1-202ENST00000467182 TGP01266 2768 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 IGLV10-54A0A075B6I4 117 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 A0A087WZ39 114 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 IGHV1-58A0A0C4DH39 117 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 IGLV5-39A0A0G2JS06 123 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 IBA57-AS1B1ANH7 110 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 COX8AP10176 69 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 XCL1P47992 114 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 HERVK_113P61574 105 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 MIAQ16674 131 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 CD164L2Q6UWJ8 174 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 MAPKAPK5-AS1Q8N8E1 139 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
COL4A1-202ENST00000467182 IGHV3-64A0A075B6Q5 118 aa8.71□□□□□ -1.02
COL4A1-202ENST00000467182 TRAV8-4A0A0B4J246 113 aa8.71□□□□□ -1.02
COL4A1-202ENST00000467182 H3BRM9 83 aa8.71□□□□□ -1.02
COL4A1-202ENST00000467182 LEPROTO15243 131 aa8.71□□□□□ -1.02
COL4A1-202ENST00000467182 CRPP02741 224 aa8.71□□□□□ -1.02
COL4A1-202ENST00000467182 NMUP48645 174 aa8.71□□□□□ -1.02
COL4A1-202ENST00000467182 UBE2DNLQ8IWF7 75 aa8.71□□□□□ -1.02
COL4A1-202ENST00000467182 BOD1L2Q8IYS8 172 aa8.71□□□□□ -1.02
COL4A1-202ENST00000467182 KRTAP1-5Q9BYS1 174 aa8.71□□□□□ -1.02
COL4A1-202ENST00000467182 GAGE12HA6NDE8 117 aa8.7□□□□□ -1.02
COL4A1-202ENST00000467182 C5orf38Q86SI9 138 aa8.7□□□□□ -1.02
COL4A1-202ENST00000467182 LINC01561Q8N1V8 128 aa8.7□□□□□ -1.02
COL4A1-202ENST00000467182 TSTD3H0UI37 97 aa8.69□□□□□ -1.02
COL4A1-202ENST00000467182 DLEU1O43261 78 aa8.69□□□□□ -1.02
COL4A1-202ENST00000467182 CASC10Q5T4H9 136 aa8.69□□□□□ -1.02
COL4A1-202ENST00000467182 MIEN1Q9BRT3 115 aa8.69□□□□□ -1.02
COL4A1-202ENST00000467182 UQCR10Q9UDW1 63 aa8.69□□□□□ -1.02
COL4A1-202ENST00000467182 DNAH10Q8IVF4 4471 aa8.69□□□□□ -1.02
COL4A1-202ENST00000467182 J3QQQ9 107 aa8.68□□□□□ -1.02
COL4A1-202ENST00000467182 K7EP13 123 aa8.68□□□□□ -1.02
COL4A1-202ENST00000467182 SLC25A34Q6PIV7 304 aa8.68□□□□□ -1.02
COL4A1-202ENST00000467182 C10orf126Q8N4M7 172 aa8.68□□□□□ -1.02
COL4A1-202ENST00000467182 PLEKHB2Q96CS7 222 aa8.68□□□□□ -1.02
COL4A1-202ENST00000467182 TENM2Q9NT68 2774 aa8.67□□□□□ -1.02
COL4A1-202ENST00000467182 C3orf84H3BNL1 204 aa8.67□□□□□ -1.02
COL4A1-202ENST00000467182 C2orf91Q6ZV80 131 aa8.67□□□□□ -1.02
COL4A1-202ENST00000467182 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
COL4A1-202ENST00000467182 COX7A2LO14548 114 aa8.66□□□□□ -1.02
COL4A1-202ENST00000467182 LGALS3P17931 250 aaKnown RBP8.65□□□□□ -1.02
COL4A1-202ENST00000467182 DDTP30046 118 aa8.65□□□□□ -1.02
COL4A1-202ENST00000467182 Q9HAA7 133 aa8.65□□□□□ -1.02
COL4A1-202ENST00000467182 DNAH2Q9P225 4427 aa8.65□□□□□ -1.03
COL4A1-202ENST00000467182 KMT2AQ03164 3969 aa8.64□□□□□ -1.03
COL4A1-202ENST00000467182 IGKV2D-24A0A075B6R9 120 aa8.64□□□□□ -1.03
COL4A1-202ENST00000467182 NBDYA0A0U1RRE5 68 aa8.64□□□□□ -1.03
COL4A1-202ENST00000467182 PCP4L1A6NKN8 68 aa8.64□□□□□ -1.03
COL4A1-202ENST00000467182 ZNF815PA8K554 130 aa8.64□□□□□ -1.03
COL4A1-202ENST00000467182 KIAA0087Q14695 138 aa8.64□□□□□ -1.03
COL4A1-202ENST00000467182 COX7B2Q8TF08 81 aa8.64□□□□□ -1.03
COL4A1-202ENST00000467182 C1orf43Q9BWL3 253 aa8.64□□□□□ -1.03
COL4A1-202ENST00000467182 ZNF625Q96I27 306 aaPredicted RBP8.63□□□□□ -1.03
COL4A1-202ENST00000467182 NDUFA1O15239 70 aa8.62□□□□□ -1.03
COL4A1-202ENST00000467182 Q8IZM0 81 aa8.62□□□□□ -1.03
COL4A1-202ENST00000467182 C15orf56Q8N910 161 aa8.62□□□□□ -1.03
COL4A1-202ENST00000467182 ORAOV1Q8WV07 137 aa8.62□□□□□ -1.03
COL4A1-202ENST00000467182 NDUFA12Q9UI09 145 aa8.62□□□□□ -1.03
COL4A1-202ENST00000467182 MALP21145 153 aa8.61□□□□□ -1.03
COL4A1-202ENST00000467182 HNRNPA3P51991 378 aaKnown RBP8.61□□□□□ -1.03
COL4A1-202ENST00000467182 LINC00476Q8WZB0 136 aa8.61□□□□□ -1.03
COL4A1-202ENST00000467182 HIGD1BQ9P298 99 aa8.61□□□□□ -1.03
COL4A1-202ENST00000467182 SACSQ9NZJ4 4579 aa8.6□□□□□ -1.03
COL4A1-202ENST00000467182 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
COL4A1-202ENST00000467182 TTC32Q5I0X7 151 aa8.6□□□□□ -1.03
COL4A1-202ENST00000467182 RMI2Q96E14 147 aa8.6□□□□□ -1.03
COL4A1-202ENST00000467182 TOMM7Q9P0U1 55 aa8.6□□□□□ -1.03
COL4A1-202ENST00000467182 HYDINQ4G0P3 5121 aa8.6□□□□□ -1.03
COL4A1-202ENST00000467182 LINC00587B1AMM8 73 aa8.59□□□□□ -1.03
COL4A1-202ENST00000467182 APOMO95445 188 aa8.59□□□□□ -1.03
COL4A1-202ENST00000467182 Q6ZR54 194 aa8.59□□□□□ -1.03
COL4A1-202ENST00000467182 LITAFQ99732 161 aa8.59□□□□□ -1.03
COL4A1-202ENST00000467182 CTAG1AP78358 180 aa8.58□□□□□ -1.04
COL4A1-202ENST00000467182 SPAG11BQ08648 103 aa8.58□□□□□ -1.04
COL4A1-202ENST00000467182 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
COL4A1-202ENST00000467182 C6orf223Q8N319 242 aa8.58□□□□□ -1.04
COL4A1-202ENST00000467182 DNAH17Q9UFH2 4485 aa8.57□□□□□ -1.04
COL4A1-202ENST00000467182 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
COL4A1-202ENST00000467182 LY6G6CO95867 125 aa8.57□□□□□ -1.04
COL4A1-202ENST00000467182 C6orf226Q5I0X4 101 aa8.57□□□□□ -1.04
COL4A1-202ENST00000467182 C2orf82Q6UX34 121 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms