RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 SMDT1Q9H4I9 107 aa6.11□□□□□ -1.43
GPNMB-206ENST00000465673 RPL13AP40429 203 aaKnown RBP6.1□□□□□ -1.43
GPNMB-206ENST00000465673 CT83Q5H943 113 aa6.1□□□□□ -1.43
GPNMB-206ENST00000465673 C9orf129Q5T035 196 aaKnown RBP6.1□□□□□ -1.43
GPNMB-206ENST00000465673 C2orf82Q6UX34 121 aa6.1□□□□□ -1.43
GPNMB-206ENST00000465673 KIR2DL4Q99706 377 aa6.1□□□□□ -1.43
GPNMB-206ENST00000465673 TIMM21Q9BVV7 248 aa6.1□□□□□ -1.43
GPNMB-206ENST00000465673 TAGLN2P37802 199 aaKnown RBP6.09□□□□□ -1.43
GPNMB-206ENST00000465673 KIAA0087Q14695 138 aa6.09□□□□□ -1.43
GPNMB-206ENST00000465673 TMEM241Q24JQ0 296 aa6.09□□□□□ -1.43
GPNMB-206ENST00000465673 MRPL51Q4U2R6 128 aaKnown RBP6.09□□□□□ -1.43
GPNMB-206ENST00000465673 A0A087X002 238 aa6.08□□□□□ -1.44
GPNMB-206ENST00000465673 SMAGPQ0VAQ4 97 aa6.08□□□□□ -1.44
GPNMB-206ENST00000465673 LINC01551Q86U37 167 aa6.08□□□□□ -1.44
GPNMB-206ENST00000465673 IFITM10A6NMD0 228 aa6.07□□□□□ -1.44
GPNMB-206ENST00000465673 F8WDY8 70 aa6.07□□□□□ -1.44
GPNMB-206ENST00000465673 TMEM250H0YL14 139 aa6.07□□□□□ -1.44
GPNMB-206ENST00000465673 ZNF861PO60384 105 aa6.07□□□□□ -1.44
GPNMB-206ENST00000465673 RIGQ13278 110 aa6.07□□□□□ -1.44
GPNMB-206ENST00000465673 CARHSP1Q9Y2V2 147 aaKnown RBP6.07□□□□□ -1.44
GPNMB-206ENST00000465673 TCAPO15273 167 aa6.06□□□□□ -1.44
GPNMB-206ENST00000465673 FAM104BQ5XKR9 115 aa6.06□□□□□ -1.44
GPNMB-206ENST00000465673 SLC51BQ86UW2 128 aa6.06□□□□□ -1.44
GPNMB-206ENST00000465673 LINC00469Q8N7U9 141 aa6.06□□□□□ -1.44
GPNMB-206ENST00000465673 TMEM18Q96B42 140 aa6.06□□□□□ -1.44
GPNMB-206ENST00000465673 RETNLBQ9BQ08 111 aa6.06□□□□□ -1.44
GPNMB-206ENST00000465673 SMIM7Q9BQ49 75 aa6.06□□□□□ -1.44
GPNMB-206ENST00000465673 OSTCQ9NRP0 149 aa6.06□□□□□ -1.44
GPNMB-206ENST00000465673 ANAPC11Q9NYG5 84 aa6.06□□□□□ -1.44
GPNMB-206ENST00000465673 V9GYV3 84 aa6.06□□□□□ -1.44
GPNMB-206ENST00000465673 NDUFC2-KCTD14E9PQ53 114 aa6.05□□□□□ -1.44
GPNMB-206ENST00000465673 PPP1R2P9O14990 202 aa6.05□□□□□ -1.44
GPNMB-206ENST00000465673 PPP1R17O96001 155 aa6.05□□□□□ -1.44
GPNMB-206ENST00000465673 HBBP68871 147 aa6.05□□□□□ -1.44
GPNMB-206ENST00000465673 CTDSP1Q9GZU7 261 aa6.05□□□□□ -1.44
GPNMB-206ENST00000465673 MUC17Q685J3 4493 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 TGIF2-C20orf24A0A0A6YYL0 155 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 ZNF727A8MUV8 499 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 TNFRSF6BO95407 300 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 CKS2P33552 79 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 MRPS36P82909 103 aaKnown RBP6.04□□□□□ -1.44
GPNMB-206ENST00000465673 LINC00242Q5T6M2 205 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 ZC2HC1BQ5TFG8 222 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 ALKAL2Q6UX46 152 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 C20orf78Q9BR46 151 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 XAGE1AQ9HD64 81 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 SPANXA1Q9NS26 97 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 C22orf24Q9Y442 160 aa6.04□□□□□ -1.44
GPNMB-206ENST00000465673 TRBV24-1A0A075B6N3 115 aa6.03□□□□□ -1.44
GPNMB-206ENST00000465673 TRBV30A0A0K0K1B3 111 aa6.03□□□□□ -1.44
GPNMB-206ENST00000465673 LCE2BO14633 110 aa6.03□□□□□ -1.44
GPNMB-206ENST00000465673 NPYP01303 97 aa6.03□□□□□ -1.44
GPNMB-206ENST00000465673 TYMSOSQ8TAI1 123 aa6.03□□□□□ -1.44
GPNMB-206ENST00000465673 PACRGQ96M98 296 aaPredicted RBP6.03□□□□□ -1.44
GPNMB-206ENST00000465673 SMIM2Q9BVW6 85 aa6.03□□□□□ -1.44
GPNMB-206ENST00000465673 D6R8Y8 96 aa6.02□□□□□ -1.45
GPNMB-206ENST00000465673 RPL32P62910 135 aaKnown RBP6.02□□□□□ -1.45
GPNMB-206ENST00000465673 EIF5A2Q9GZV4 153 aaKnown RBP6.02□□□□□ -1.45
GPNMB-206ENST00000465673 IGLV4-3A0A075B6K6 122 aa6.01□□□□□ -1.45
GPNMB-206ENST00000465673 LINC00862A6NCI5 91 aa6.01□□□□□ -1.45
GPNMB-206ENST00000465673 SRP19P09132 144 aaKnown RBP6.01□□□□□ -1.45
GPNMB-206ENST00000465673 CRYGAP11844 174 aa6.01□□□□□ -1.45
GPNMB-206ENST00000465673 KRTAP13-2Q52LG2 175 aa6.01□□□□□ -1.45
GPNMB-206ENST00000465673 NAT8BQ9UHF3 227 aa6.01□□□□□ -1.45
GPNMB-206ENST00000465673 NUPR1O60356 82 aa6□□□□□ -1.45
GPNMB-206ENST00000465673 BLOC1S1P78537 153 aa6□□□□□ -1.45
GPNMB-206ENST00000465673 FAM74A3Q4VXF1 159 aa6□□□□□ -1.45
GPNMB-206ENST00000465673 TCTE3Q8IZS6 198 aa6□□□□□ -1.45
GPNMB-206ENST00000465673 TOMM7Q9P0U1 55 aa6□□□□□ -1.45
GPNMB-206ENST00000465673 SMIM27A0A1W2PRY6 76 aa5.99□□□□□ -1.45
GPNMB-206ENST00000465673 RPL37AP8A6NKH3 93 aa5.99□□□□□ -1.45
GPNMB-206ENST00000465673 IFI27P40305 119 aaPredicted RBP5.99□□□□□ -1.45
GPNMB-206ENST00000465673 RPL23P62829 140 aaKnown RBP5.99□□□□□ -1.45
GPNMB-206ENST00000465673 MRPL54Q6P161 138 aaKnown RBP5.99□□□□□ -1.45
GPNMB-206ENST00000465673 CDIP1Q9H305 208 aa5.99□□□□□ -1.45
GPNMB-206ENST00000465673 BCE1O60756 84 aa5.98□□□□□ -1.45
GPNMB-206ENST00000465673 RPL28P46779 137 aaKnown RBP5.98□□□□□ -1.45
GPNMB-206ENST00000465673 ADIRFQ15847 76 aa5.98□□□□□ -1.45
GPNMB-206ENST00000465673 LBHQ53QV2 105 aaPredicted RBP5.98□□□□□ -1.45
GPNMB-206ENST00000465673 MRPL55Q7Z7F7 128 aaKnown RBP5.98□□□□□ -1.45
GPNMB-206ENST00000465673 TMEM141Q96I45 108 aa5.98□□□□□ -1.45
GPNMB-206ENST00000465673 GAGE10A6NGK3 116 aa5.97□□□□□ -1.45
GPNMB-206ENST00000465673 C9JQL5 133 aa5.97□□□□□ -1.45
GPNMB-206ENST00000465673 PRSS2P07478 247 aa5.97□□□□□ -1.45
GPNMB-206ENST00000465673 CKS1BP61024 79 aa5.97□□□□□ -1.45
GPNMB-206ENST00000465673 C6orf226Q5I0X4 101 aa5.97□□□□□ -1.45
GPNMB-206ENST00000465673 LINC00173Q6ZV60 143 aa5.97□□□□□ -1.45
GPNMB-206ENST00000465673 LINC00167Q96N53 147 aa5.97□□□□□ -1.45
GPNMB-206ENST00000465673 PYGO1Q9Y3Y4 419 aa5.97□□□□□ -1.45
GPNMB-206ENST00000465673 IGLV7-46A0A075B6I9 117 aa5.96□□□□□ -1.46
GPNMB-206ENST00000465673 LOC389332A0A1B0GUA5 103 aa5.96□□□□□ -1.46
GPNMB-206ENST00000465673 A0A1B0GXF2 115 aa5.96□□□□□ -1.46
GPNMB-206ENST00000465673 RAB5AP20339 215 aa5.96□□□□□ -1.46
GPNMB-206ENST00000465673 TEX43Q6ZNM6 134 aa5.96□□□□□ -1.46
GPNMB-206ENST00000465673 LINC01561Q8N1V8 128 aa5.96□□□□□ -1.46
GPNMB-206ENST00000465673 ALKBH7Q9BT30 221 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-206ENST00000465673 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
GPNMB-206ENST00000465673 Q6ZN92 141 aa5.95□□□□□ -1.46
GPNMB-206ENST00000465673 LINC00304Q8N9R0 145 aa5.95□□□□□ -1.46
GPNMB-206ENST00000465673 A0A1B0GW15 77 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms