RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 RIGQ13278 110 aa5.93□□□□□ -1.46
USP39-212ENST00000465514 NRACQ8N912 160 aa5.93□□□□□ -1.46
USP39-212ENST00000465514 KIR2DL4Q99706 377 aa5.93□□□□□ -1.46
USP39-212ENST00000465514 OPRPNQ99935 248 aaPredicted RBP5.93□□□□□ -1.46
USP39-212ENST00000465514 EIF5A2Q9GZV4 153 aaKnown RBP5.93□□□□□ -1.46
USP39-212ENST00000465514 ZNF727A8MUV8 499 aa5.92□□□□□ -1.46
USP39-212ENST00000465514 PPP1R17O96001 155 aa5.92□□□□□ -1.46
USP39-212ENST00000465514 SPAG11BQ08648 103 aa5.92□□□□□ -1.46
USP39-212ENST00000465514 C1orf137Q5JT78 98 aa5.92□□□□□ -1.46
USP39-212ENST00000465514 Q6ZUT4 128 aa5.92□□□□□ -1.46
USP39-212ENST00000465514 PHF5AQ7RTV0 110 aaKnown RBP5.92□□□□□ -1.46
USP39-212ENST00000465514 V9GYV3 84 aa5.92□□□□□ -1.46
USP39-212ENST00000465514 PPP1R2P9O14990 202 aa5.91□□□□□ -1.46
USP39-212ENST00000465514 SRP19P09132 144 aaKnown RBP5.91□□□□□ -1.46
USP39-212ENST00000465514 RNF151Q2KHN1 245 aa5.91□□□□□ -1.46
USP39-212ENST00000465514 MRPL51Q4U2R6 128 aaKnown RBP5.91□□□□□ -1.46
USP39-212ENST00000465514 TMEM18Q96B42 140 aa5.91□□□□□ -1.46
USP39-212ENST00000465514 TIMM21Q9BVV7 248 aa5.91□□□□□ -1.46
USP39-212ENST00000465514 FAM104BQ5XKR9 115 aa5.9□□□□□ -1.46
USP39-212ENST00000465514 OR10D4PQ8NGN7 298 aa5.9□□□□□ -1.46
USP39-212ENST00000465514 NAT8BQ9UHF3 227 aa5.9□□□□□ -1.46
USP39-212ENST00000465514 RPL39P62891 51 aaKnown RBP5.89□□□□□ -1.47
USP39-212ENST00000465514 IFITM2Q01629 132 aa5.89□□□□□ -1.47
USP39-212ENST00000465514 ORAOV1Q8WV07 137 aa5.89□□□□□ -1.47
USP39-212ENST00000465514 FAM104AQ969W3 186 aa5.89□□□□□ -1.47
USP39-212ENST00000465514 C20orf78Q9BR46 151 aa5.89□□□□□ -1.47
USP39-212ENST00000465514 TRBV24-1A0A075B6N3 115 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 A0A087WZ39 114 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 IGHV3OR16-9A0A0B4J2B5 98 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 FAM168BA1KXE4 195 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 LINC00862A6NCI5 91 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 IGLV7-43P04211 117 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 CKS2P33552 79 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 RPL32P62910 135 aaKnown RBP5.88□□□□□ -1.47
USP39-212ENST00000465514 TMEM241Q24JQ0 296 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 FAM74A3Q4VXF1 159 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 C10orf25Q5T742 122 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 PRR26Q8N8Z3 221 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 DIRC1Q969H9 104 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 IMMP2LQ96T52 175 aa5.88□□□□□ -1.47
USP39-212ENST00000465514 MRPL35Q9NZE8 188 aaKnown RBP5.88□□□□□ -1.47
USP39-212ENST00000465514 SMIM27A0A1W2PRY6 76 aa5.87□□□□□ -1.47
USP39-212ENST00000465514 F8WDY8 70 aa5.87□□□□□ -1.47
USP39-212ENST00000465514 NDUFA1O15239 70 aa5.87□□□□□ -1.47
USP39-212ENST00000465514 TCAPO15273 167 aa5.87□□□□□ -1.47
USP39-212ENST00000465514 TNFRSF6BO95407 300 aa5.87□□□□□ -1.47
USP39-212ENST00000465514 RPL23P62829 140 aaKnown RBP5.87□□□□□ -1.47
USP39-212ENST00000465514 UNQ6190/PRO20217Q6UXQ8 127 aa5.87□□□□□ -1.47
USP39-212ENST00000465514 KRTAP11-1Q8IUC1 163 aa5.87□□□□□ -1.47
USP39-212ENST00000465514 IFITM10A6NMD0 228 aa5.86□□□□□ -1.47
USP39-212ENST00000465514 H0Y9J4 135 aa5.86□□□□□ -1.47
USP39-212ENST00000465514 TLX1NBP0CAT3 122 aa5.86□□□□□ -1.47
USP39-212ENST00000465514 HBBP68871 147 aa5.86□□□□□ -1.47
USP39-212ENST00000465514 MRPS36P82909 103 aaKnown RBP5.86□□□□□ -1.47
USP39-212ENST00000465514 ADIRFQ15847 76 aa5.86□□□□□ -1.47
USP39-212ENST00000465514 FAM19A5Q7Z5A7 132 aaPredicted RBP5.86□□□□□ -1.47
USP39-212ENST00000465514 SMIM2Q9BVW6 85 aa5.86□□□□□ -1.47
USP39-212ENST00000465514 SPANXA1Q9NS26 97 aa5.86□□□□□ -1.47
USP39-212ENST00000465514 C6orf48Q9UBA6 75 aa5.86□□□□□ -1.47
USP39-212ENST00000465514 A0A1B0GW15 77 aa5.85□□□□□ -1.47
USP39-212ENST00000465514 D6R8Y8 96 aa5.85□□□□□ -1.47
USP39-212ENST00000465514 GAGE2EQ4V326 116 aa5.85□□□□□ -1.47
USP39-212ENST00000465514 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
USP39-212ENST00000465514 GAGE2DQ9UEU5 116 aa5.85□□□□□ -1.47
USP39-212ENST00000465514 C9JQL5 133 aa5.84□□□□□ -1.47
USP39-212ENST00000465514 NPYP01303 97 aa5.84□□□□□ -1.47
USP39-212ENST00000465514 MRPL54Q6P161 138 aaKnown RBP5.84□□□□□ -1.47
USP39-212ENST00000465514 KRTAP7-1Q8IUC3 87 aa5.84□□□□□ -1.47
USP39-212ENST00000465514 SMDT1Q9H4I9 107 aa5.84□□□□□ -1.47
USP39-212ENST00000465514 NAT8Q9UHE5 227 aa5.84□□□□□ -1.47
USP39-212ENST00000465514 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
USP39-212ENST00000465514 TGIF2-C20orf24A0A0A6YYL0 155 aa5.83□□□□□ -1.48
USP39-212ENST00000465514 F8W036 122 aa5.83□□□□□ -1.48
USP39-212ENST00000465514 KIAA0087Q14695 138 aa5.83□□□□□ -1.48
USP39-212ENST00000465514 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
USP39-212ENST00000465514 A0A1B0GXF2 115 aa5.82□□□□□ -1.48
USP39-212ENST00000465514 M0QXV9 152 aa5.82□□□□□ -1.48
USP39-212ENST00000465514 PPBPP02775 128 aa5.82□□□□□ -1.48
USP39-212ENST00000465514 S100A8P05109 93 aa5.82□□□□□ -1.48
USP39-212ENST00000465514 KRTAP1-4P0C5Y4 121 aa5.82□□□□□ -1.48
USP39-212ENST00000465514 RAB5AP20339 215 aa5.82□□□□□ -1.48
USP39-212ENST00000465514 UBE2BP63146 152 aa5.82□□□□□ -1.48
USP39-212ENST00000465514 SRSF3P84103 164 aaKnown RBP5.82□□□□□ -1.48
USP39-212ENST00000465514 LINC00242Q5T6M2 205 aa5.82□□□□□ -1.48
USP39-212ENST00000465514 C2orf82Q6UX34 121 aa5.82□□□□□ -1.48
USP39-212ENST00000465514 MUC17Q685J3 4493 aa5.81□□□□□ -1.48
USP39-212ENST00000465514 IGLV4-3A0A075B6K6 122 aa5.81□□□□□ -1.48
USP39-212ENST00000465514 TRBV30A0A0K0K1B3 111 aa5.81□□□□□ -1.48
USP39-212ENST00000465514 IFI27P40305 119 aaPredicted RBP5.81□□□□□ -1.48
USP39-212ENST00000465514 CLLU1Q5K131 121 aa5.81□□□□□ -1.48
USP39-212ENST00000465514 PYGO1Q9Y3Y4 419 aa5.81□□□□□ -1.48
USP39-212ENST00000465514 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
USP39-212ENST00000465514 NDUFC2-KCTD14E9PQ53 114 aa5.8□□□□□ -1.48
USP39-212ENST00000465514 UBE2D1P51668 147 aa5.8□□□□□ -1.48
USP39-212ENST00000465514 RAB14P61106 215 aa5.8□□□□□ -1.48
USP39-212ENST00000465514 PEA15Q15121 130 aa5.8□□□□□ -1.48
USP39-212ENST00000465514 C9orf129Q5T035 196 aaKnown RBP5.8□□□□□ -1.48
USP39-212ENST00000465514 TMEM136Q6ZRR5 245 aa5.8□□□□□ -1.48
USP39-212ENST00000465514 ORMDL3Q8N138 153 aa5.8□□□□□ -1.48
USP39-212ENST00000465514 TMEM141Q96I45 108 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms