RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 C15orf56Q8N910 161 aa12.12□□□□□ -0.47
SCAMP3-204ENST00000465312 ATP5LO75964 103 aa12.11□□□□□ -0.47
SCAMP3-204ENST00000465312 LINC00242Q5T6M2 205 aa12.11□□□□□ -0.47
SCAMP3-204ENST00000465312 FAM19A2Q8N3H0 131 aa12.11□□□□□ -0.47
SCAMP3-204ENST00000465312 GEMIN7Q9H840 131 aaKnown RBP12.11□□□□□ -0.47
SCAMP3-204ENST00000465312 ZNF561-AS1K7EIQ3 104 aa12.1□□□□□ -0.47
SCAMP3-204ENST00000465312 SEC11AP67812 179 aa12.1□□□□□ -0.47
SCAMP3-204ENST00000465312 PMVKQ15126 192 aa12.1□□□□□ -0.47
SCAMP3-204ENST00000465312 PKHD1P08F94 4074 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 LINC01620Q4KN68 170 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
SCAMP3-204ENST00000465312 A0A0J9YXV3 536 aa12.08□□□□□ -0.48
SCAMP3-204ENST00000465312 HERVK_113P63121 156 aa12.08□□□□□ -0.48
SCAMP3-204ENST00000465312 COX6A2Q02221 97 aa12.08□□□□□ -0.48
SCAMP3-204ENST00000465312 PDZD11Q5EBL8 140 aa12.08□□□□□ -0.48
SCAMP3-204ENST00000465312 ORAOV1Q8WV07 137 aa12.08□□□□□ -0.48
SCAMP3-204ENST00000465312 LINC00526Q96FQ7 95 aa12.08□□□□□ -0.48
SCAMP3-204ENST00000465312 CST9LQ9H4G1 147 aa12.08□□□□□ -0.48
SCAMP3-204ENST00000465312 GVQW2A0A096LPI5 108 aaPredicted RBP12.07□□□□□ -0.48
SCAMP3-204ENST00000465312 IGHV3OR16-9A0A0B4J2B5 98 aa12.07□□□□□ -0.48
SCAMP3-204ENST00000465312 BIRC6Q9NR09 4857 aa12.07□□□□□ -0.48
SCAMP3-204ENST00000465312 SPAG11BQ08648 103 aa12.06□□□□□ -0.48
SCAMP3-204ENST00000465312 LINC00469Q8N7U9 141 aa12.06□□□□□ -0.48
SCAMP3-204ENST00000465312 IFI27L1Q96BM0 104 aa12.06□□□□□ -0.48
SCAMP3-204ENST00000465312 PACRGQ96M98 296 aaPredicted RBP12.06□□□□□ -0.48
SCAMP3-204ENST00000465312 H0Y8G0 127 aa12.05□□□□□ -0.48
SCAMP3-204ENST00000465312 LEPROTL1O95214 131 aa12.05□□□□□ -0.48
SCAMP3-204ENST00000465312 KRTAP10-1P60331 282 aa12.05□□□□□ -0.48
SCAMP3-204ENST00000465312 FABP4P15090 132 aa12.04□□□□□ -0.48
SCAMP3-204ENST00000465312 LINC00310P59036 64 aa12.04□□□□□ -0.48
SCAMP3-204ENST00000465312 IGLV4-69A0A075B6H9 119 aa12.03□□□□□ -0.48
SCAMP3-204ENST00000465312 A0A087WZ39 114 aa12.03□□□□□ -0.48
SCAMP3-204ENST00000465312 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
SCAMP3-204ENST00000465312 NUPR1O60356 82 aa12.03□□□□□ -0.48
SCAMP3-204ENST00000465312 OR10D4PQ8NGN7 298 aa12.03□□□□□ -0.48
SCAMP3-204ENST00000465312 CAMK2N2Q96S95 79 aa12.03□□□□□ -0.48
SCAMP3-204ENST00000465312 TOMM7Q9P0U1 55 aa12.03□□□□□ -0.48
SCAMP3-204ENST00000465312 DNAH5Q8TE73 4624 aa12.03□□□□□ -0.48
SCAMP3-204ENST00000465312 DYNC1H1Q14204 4646 aaKnown RBP12.02□□□□□ -0.48
SCAMP3-204ENST00000465312 IGHV3-64A0A075B6Q5 118 aa12.02□□□□□ -0.49
SCAMP3-204ENST00000465312 CNBPP62633 177 aaKnown RBP12.02□□□□□ -0.49
SCAMP3-204ENST00000465312 FAM19A3Q7Z5A8 133 aa12.02□□□□□ -0.49
SCAMP3-204ENST00000465312 CHAC1Q9BUX1 264 aa12.02□□□□□ -0.49
SCAMP3-204ENST00000465312 CDKN2A-AS1Q9UH64 79 aa12.02□□□□□ -0.49
SCAMP3-204ENST00000465312 PRSS2P07478 247 aa12.01□□□□□ -0.49
SCAMP3-204ENST00000465312 CARD19Q96LW7 228 aa12.01□□□□□ -0.49
SCAMP3-204ENST00000465312 HSPB8Q9UJY1 196 aa12.01□□□□□ -0.49
SCAMP3-204ENST00000465312 CHTOPQ9Y3Y2 248 aaKnown RBP12.01□□□□□ -0.49
SCAMP3-204ENST00000465312 SYCNQ0VAF6 134 aa12□□□□□ -0.49
SCAMP3-204ENST00000465312 C9orf163Q8N9P6 203 aa12□□□□□ -0.49
SCAMP3-204ENST00000465312 H3BRM9 83 aa11.99□□□□□ -0.49
SCAMP3-204ENST00000465312 SLPIP03973 132 aa11.99□□□□□ -0.49
SCAMP3-204ENST00000465312 LINC01561Q8N1V8 128 aa11.98□□□□□ -0.49
SCAMP3-204ENST00000465312 NDUFA1O15239 70 aa11.97□□□□□ -0.49
SCAMP3-204ENST00000465312 SPINK8P0C7L1 97 aa11.97□□□□□ -0.49
SCAMP3-204ENST00000465312 IGLC3P0DOY3 106 aa11.97□□□□□ -0.49
SCAMP3-204ENST00000465312 TMEM170BQ5T4T1 132 aa11.97□□□□□ -0.49
SCAMP3-204ENST00000465312 C2orf48Q96LS8 159 aa11.97□□□□□ -0.49
SCAMP3-204ENST00000465312 TRAV12-1A0A0B4J245 112 aa11.96□□□□□ -0.49
SCAMP3-204ENST00000465312 HAMPP81172 84 aa11.96□□□□□ -0.49
SCAMP3-204ENST00000465312 Q6ZRU5 148 aa11.96□□□□□ -0.49
SCAMP3-204ENST00000465312 CKS1BP61024 79 aa11.95□□□□□ -0.5
SCAMP3-204ENST00000465312 C6orf226Q5I0X4 101 aa11.95□□□□□ -0.5
SCAMP3-204ENST00000465312 DPH3Q96FX2 82 aa11.95□□□□□ -0.5
SCAMP3-204ENST00000465312 MAP1LC3CQ9BXW4 147 aa11.95□□□□□ -0.5
SCAMP3-204ENST00000465312 LRP1BQ9NZR2 4599 aa11.95□□□□□ -0.5
SCAMP3-204ENST00000465312 C11orf86A6NJI1 115 aa11.94□□□□□ -0.5
SCAMP3-204ENST00000465312 MRPL35Q9NZE8 188 aaKnown RBP11.94□□□□□ -0.5
SCAMP3-204ENST00000465312 PKIGQ9Y2B9 76 aa11.94□□□□□ -0.5
SCAMP3-204ENST00000465312 IGLV5-45A0A087WSX0 123 aa11.93□□□□□ -0.5
SCAMP3-204ENST00000465312 SMIM1B2RUZ4 78 aa11.93□□□□□ -0.5
SCAMP3-204ENST00000465312 F8VRH5 84 aa11.93□□□□□ -0.5
SCAMP3-204ENST00000465312 CDK2AP2O75956 126 aa11.93□□□□□ -0.5
SCAMP3-204ENST00000465312 ZNF22P17026 224 aaPredicted RBP11.93□□□□□ -0.5
SCAMP3-204ENST00000465312 FAM30AQ9NZY2 134 aa11.93□□□□□ -0.5
SCAMP3-204ENST00000465312 IGKV2-24A0A0C4DH68 120 aa11.92□□□□□ -0.5
SCAMP3-204ENST00000465312 C2orf82Q6UX34 121 aa11.92□□□□□ -0.5
SCAMP3-204ENST00000465312 Q8IZM0 81 aa11.92□□□□□ -0.5
SCAMP3-204ENST00000465312 F8WDY8 70 aa11.91□□□□□ -0.5
SCAMP3-204ENST00000465312 S100A6P06703 90 aa11.91□□□□□ -0.5
SCAMP3-204ENST00000465312 UNQ6190/PRO20217Q6UXQ8 127 aa11.91□□□□□ -0.5
SCAMP3-204ENST00000465312 SDIM1Q6ZPB5 146 aa11.91□□□□□ -0.5
SCAMP3-204ENST00000465312 COX7B2Q8TF08 81 aa11.91□□□□□ -0.5
SCAMP3-204ENST00000465312 RPL18AQ02543 176 aaKnown RBP11.9□□□□□ -0.5
SCAMP3-204ENST00000465312 KIAA0087Q14695 138 aa11.9□□□□□ -0.5
SCAMP3-204ENST00000465312 COA6Q5JTJ3 125 aaKnown RBP11.9□□□□□ -0.5
SCAMP3-204ENST00000465312 LOC107984640A0A0U1RRK4 108 aa11.89□□□□□ -0.51
SCAMP3-204ENST00000465312 GAGE2BQ13066 116 aa11.89□□□□□ -0.51
SCAMP3-204ENST00000465312 ODF1Q14990 250 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms