RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 MGPP08493 103 aa0.56□□□□□ -2.32
CLK1-208ENST00000464454 NMBP08949 121 aa0.56□□□□□ -2.32
CLK1-208ENST00000464454 FAM223AQ8IWN6 122 aa0.56□□□□□ -2.32
CLK1-208ENST00000464454 FAM103A1Q9BTL3 118 aaKnown RBP0.56□□□□□ -2.32
CLK1-208ENST00000464454 KDM5AP29375 1690 aaKnown RBP0.56□□□□□ -2.32
CLK1-208ENST00000464454 NLRP1Q9C000 1473 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 PSME4Q14997 1843 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 DOCK2Q92608 1830 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 FRAS1Q86XX4 4008 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 F2Z2F3 143 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 TRAPPC2P0DI81 140 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 TRAPPC2BP0DI82 140 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 PMCHL1Q16048 86 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 CFAP126Q5VTH2 177 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 PRO1933Q9H354 126 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 ARL2-SNX15V9GYD0 113 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 LRRC37A2A6NM11 1700 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 IFT172Q9UG01 1749 aa0.55□□□□□ -2.32
CLK1-208ENST00000464454 ABCC2Q92887 1545 aa0.54□□□□□ -2.32
CLK1-208ENST00000464454 BAZ1AQ9NRL2 1556 aaPredicted RBP0.54□□□□□ -2.32
CLK1-208ENST00000464454 CTXND1A0A1B0GTU2 59 aa0.54□□□□□ -2.32
CLK1-208ENST00000464454 PRH1P02810 166 aa0.54□□□□□ -2.32
CLK1-208ENST00000464454 FAUP35544 74 aaKnown RBP0.54□□□□□ -2.32
CLK1-208ENST00000464454 ALKAL2Q6UX46 152 aa0.54□□□□□ -2.32
CLK1-208ENST00000464454 F5P12259 2224 aa0.54□□□□□ -2.32
CLK1-208ENST00000464454 UACAQ9BZF9 1416 aa0.54□□□□□ -2.32
CLK1-208ENST00000464454 CCDC18Q5T9S5 1454 aa0.54□□□□□ -2.32
CLK1-208ENST00000464454 MAGI2Q86UL8 1455 aa0.54□□□□□ -2.32
CLK1-208ENST00000464454 ZFHX3Q15911 3703 aa0.53□□□□□ -2.32
CLK1-208ENST00000464454 KIF21AQ7Z4S6 1674 aa0.53□□□□□ -2.32
CLK1-208ENST00000464454 CACNA1EQ15878 2313 aa0.53□□□□□ -2.32
CLK1-208ENST00000464454 S100A16Q96FQ6 103 aaKnown RBP0.53□□□□□ -2.32
CLK1-208ENST00000464454 PRR15LQ9BU68 103 aa0.53□□□□□ -2.32
CLK1-208ENST00000464454 LAMC1P11047 1609 aa0.53□□□□□ -2.33
CLK1-208ENST00000464454 UQCRHLA0A096LP55 91 aa0.52□□□□□ -2.33
CLK1-208ENST00000464454 C7orf77A4D0Y5 90 aa0.52□□□□□ -2.33
CLK1-208ENST00000464454 UQCRHP07919 91 aa0.52□□□□□ -2.33
CLK1-208ENST00000464454 ARMS2P0C7Q2 107 aa0.52□□□□□ -2.33
CLK1-208ENST00000464454 GCHFRP30047 84 aa0.52□□□□□ -2.33
CLK1-208ENST00000464454 SMR3AQ99954 134 aa0.52□□□□□ -2.33
CLK1-208ENST00000464454 PSENENQ9NZ42 101 aa0.52□□□□□ -2.33
CLK1-208ENST00000464454 EDC4Q6P2E9 1401 aaKnown RBP0.52□□□□□ -2.33
CLK1-208ENST00000464454 CUX1P39880 1505 aa0.52□□□□□ -2.33
CLK1-208ENST00000464454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.52□□□□□ -2.33
CLK1-208ENST00000464454 TOP2BQ02880 1626 aa0.52□□□□□ -2.33
CLK1-208ENST00000464454 A0A1B0GWA3 101 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 M0R3E3 92 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 CYB5AP00167 134 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 HMGN2P05204 90 aaKnown RBP0.51□□□□□ -2.33
CLK1-208ENST00000464454 ERVK-7P63135 1459 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 MAP3K1Q13233 1512 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 NMSQ5H8A3 153 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 PSMG4Q5JS54 123 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 NEXMIFQ5QGS0 1516 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 C10orf113Q5VZT2 155 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 SFTA2Q6UW10 78 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 LRRC9Q6ZRR7 1453 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 TULP4Q9NRJ4 1543 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 ZNF236Q9UL36 1845 aa0.51□□□□□ -2.33
CLK1-208ENST00000464454 NAV2Q8IVL1 2488 aa0.5□□□□□ -2.33
CLK1-208ENST00000464454 KDM5DQ9BY66 1539 aa0.5□□□□□ -2.33
CLK1-208ENST00000464454 C1orf167Q5SNV9 1468 aa0.5□□□□□ -2.33
CLK1-208ENST00000464454 ZNF815PA8K554 130 aa0.5□□□□□ -2.33
CLK1-208ENST00000464454 F8WEM9 126 aa0.5□□□□□ -2.33
CLK1-208ENST00000464454 H3BQF6 201 aa0.5□□□□□ -2.33
CLK1-208ENST00000464454 I3L2K1 104 aa0.5□□□□□ -2.33
CLK1-208ENST00000464454 SNRPFP62306 86 aaKnown RBP0.5□□□□□ -2.33
CLK1-208ENST00000464454 ETDBQ3ZM63 59 aa0.5□□□□□ -2.33
CLK1-208ENST00000464454 LINC00643Q86TS7 51 aa0.5□□□□□ -2.33
CLK1-208ENST00000464454 MYO7AQ13402 2215 aa0.5□□□□□ -2.33
CLK1-208ENST00000464454 JMJD1CQ15652 2540 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 NCOA2Q15596 1464 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 ACYP1P07311 99 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 SMIM11AP58511 58 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 WFDC2Q14508 124 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 DEFB121Q5J5C9 76 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 Q6JHZ5 121 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 ZNF720Q7Z2F6 126 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 CNFNQ9BYD5 112 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 UBE2D4Q9Y2X8 147 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 MON2Q7Z3U7 1717 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 MYO3AQ8NEV4 1616 aa0.49□□□□□ -2.33
CLK1-208ENST00000464454 RRBP1Q9P2E9 1410 aaKnown RBP0.48□□□□□ -2.33
CLK1-208ENST00000464454 KDM3BQ7LBC6 1761 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 BDP1A6H8Y1 2624 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 A0A087WVE0 104 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 IGLC3P0DOY3 106 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 PEA15Q15121 130 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 MYO7BQ6PIF6 2116 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 UBE2DNLQ8IWF7 75 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 DEFB123Q8N688 67 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 ST20Q9HBF5 79 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 SCN7AQ01118 1682 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 LRP6O75581 1613 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 NHSL1Q5SYE7 1610 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 TCHHQ07283 1943 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 ASXL3Q9C0F0 2248 aa0.48□□□□□ -2.33
CLK1-208ENST00000464454 PPLO60437 1756 aa0.47□□□□□ -2.33
CLK1-208ENST00000464454 MEGF8Q7Z7M0 2845 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms