RNA–Protein interactions for RNA: ENST00000463948.1

EGFR-209, Transcript of epidermal growth factor receptor, humanhuman

TSL 3

Gene EGFR, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-209ENST00000463948 MRPL52Q86TS9 123 aaKnown RBP11.73□□□□□ -0.53
EGFR-209ENST00000463948 MAP1LC3AQ9H492 121 aa11.73□□□□□ -0.53
EGFR-209ENST00000463948 RNF213Q63HN8 5207 aa11.72□□□□□ -0.53
EGFR-209ENST00000463948 IGHV1-58A0A0C4DH39 117 aa11.71□□□□□ -0.53
EGFR-209ENST00000463948 LOC389332A0A1B0GUA5 103 aa11.71□□□□□ -0.53
EGFR-209ENST00000463948 KIAA1644Q3SXP7 199 aa11.71□□□□□ -0.53
EGFR-209ENST00000463948 CARD19Q96LW7 228 aa11.71□□□□□ -0.53
EGFR-209ENST00000463948 RAB5AP20339 215 aa11.7□□□□□ -0.54
EGFR-209ENST00000463948 SS18Q15532 418 aa11.7□□□□□ -0.54
EGFR-209ENST00000463948 YPEL4Q96NS1 127 aa11.7□□□□□ -0.54
EGFR-209ENST00000463948 MRPL18Q9H0U6 180 aaKnown RBP11.7□□□□□ -0.54
EGFR-209ENST00000463948 LINC00474Q9P2X8 69 aa11.7□□□□□ -0.54
EGFR-209ENST00000463948 ZNF561-AS1K7EIQ3 104 aa11.69□□□□□ -0.54
EGFR-209ENST00000463948 SMAGPQ0VAQ4 97 aa11.69□□□□□ -0.54
EGFR-209ENST00000463948 Q8N8P6 123 aa11.69□□□□□ -0.54
EGFR-209ENST00000463948 TMEM18Q96B42 140 aa11.69□□□□□ -0.54
EGFR-209ENST00000463948 A0A0J9YXV3 536 aa11.68□□□□□ -0.54
EGFR-209ENST00000463948 SYCNQ0VAF6 134 aa11.68□□□□□ -0.54
EGFR-209ENST00000463948 FABP9Q0Z7S8 132 aa11.68□□□□□ -0.54
EGFR-209ENST00000463948 SPINK6Q6UWN8 80 aa11.68□□□□□ -0.54
EGFR-209ENST00000463948 ALKBH7Q9BT30 221 aaPredicted RBP11.68□□□□□ -0.54
EGFR-209ENST00000463948 NXT2Q9NPJ8 142 aaKnown RBP11.68□□□□□ -0.54
EGFR-209ENST00000463948 SMCO4Q9NRQ5 59 aa11.68□□□□□ -0.54
EGFR-209ENST00000463948 CDC42SE2Q9NRR3 84 aa11.68□□□□□ -0.54
EGFR-209ENST00000463948 UBE2D4Q9Y2X8 147 aa11.68□□□□□ -0.54
EGFR-209ENST00000463948 CSDC2Q9Y534 153 aaKnown RBP11.68□□□□□ -0.54
EGFR-209ENST00000463948 KRTAP10-8P60410 259 aa11.67□□□□□ -0.54
EGFR-209ENST00000463948 GAGE2BQ13066 116 aa11.67□□□□□ -0.54
EGFR-209ENST00000463948 CD164L2Q6UWJ8 174 aa11.67□□□□□ -0.54
EGFR-209ENST00000463948 CBLN2Q8IUK8 224 aa11.67□□□□□ -0.54
EGFR-209ENST00000463948 ZNF664Q8N3J9 261 aa11.67□□□□□ -0.54
EGFR-209ENST00000463948 TIMM21Q9BVV7 248 aa11.67□□□□□ -0.54
EGFR-209ENST00000463948 K7EMI3 77 aa11.66□□□□□ -0.54
EGFR-209ENST00000463948 SRSF9Q13242 221 aaKnown RBP eCLIP11.66□□□□□ -0.54
EGFR-209ENST00000463948 LCE2DQ5TA82 110 aaPredicted RBP11.66□□□□□ -0.54
EGFR-209ENST00000463948 REG3GQ6UW15 175 aa11.66□□□□□ -0.54
EGFR-209ENST00000463948 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
EGFR-209ENST00000463948 IFI27P40305 119 aaPredicted RBP11.65□□□□□ -0.54
EGFR-209ENST00000463948 RPL39P62891 51 aaKnown RBP11.65□□□□□ -0.54
EGFR-209ENST00000463948 Q6ZRP5 223 aa11.65□□□□□ -0.54
EGFR-209ENST00000463948 IGLV4-69A0A075B6H9 119 aa11.64□□□□□ -0.55
EGFR-209ENST00000463948 SPANXA1Q9NS26 97 aa11.64□□□□□ -0.55
EGFR-209ENST00000463948 PKIGQ9Y2B9 76 aa11.64□□□□□ -0.55
EGFR-209ENST00000463948 MALP21145 153 aa11.63□□□□□ -0.55
EGFR-209ENST00000463948 PTTG1IPP53801 180 aa11.63□□□□□ -0.55
EGFR-209ENST00000463948 ORMDL2Q53FV1 153 aa11.63□□□□□ -0.55
EGFR-209ENST00000463948 RNASE13Q5GAN3 156 aaKnown RBP11.63□□□□□ -0.55
EGFR-209ENST00000463948 A0A1W2PNN7 141 aa11.62□□□□□ -0.55
EGFR-209ENST00000463948 LOC107984640A0A0U1RRK4 108 aa11.61□□□□□ -0.55
EGFR-209ENST00000463948 COX7A2LO14548 114 aa11.61□□□□□ -0.55
EGFR-209ENST00000463948 Q6ZUT4 128 aa11.61□□□□□ -0.55
EGFR-209ENST00000463948 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
EGFR-209ENST00000463948 C1orf196B1AJZ1 125 aa11.6□□□□□ -0.55
EGFR-209ENST00000463948 MRPS36P82909 103 aaKnown RBP11.6□□□□□ -0.55
EGFR-209ENST00000463948 C5orf38Q86SI9 138 aa11.6□□□□□ -0.55
EGFR-209ENST00000463948 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
EGFR-209ENST00000463948 CYSLTR1Q9Y271 337 aa11.6□□□□□ -0.55
EGFR-209ENST00000463948 PYGO1Q9Y3Y4 419 aa11.6□□□□□ -0.55
EGFR-209ENST00000463948 LINC01546A6NGU7 62 aa11.59□□□□□ -0.55
EGFR-209ENST00000463948 C2orf66Q6UXQ4 117 aa11.59□□□□□ -0.55
EGFR-209ENST00000463948 CAMK2N2Q96S95 79 aa11.59□□□□□ -0.55
EGFR-209ENST00000463948 G0S2P27469 103 aa11.58□□□□□ -0.56
EGFR-209ENST00000463948 OPRPNQ99935 248 aaPredicted RBP11.58□□□□□ -0.56
EGFR-209ENST00000463948 C18orf32Q8TCD1 76 aa11.57□□□□□ -0.56
EGFR-209ENST00000463948 C9orf116Q5BN46 136 aaPredicted RBP11.56□□□□□ -0.56
EGFR-209ENST00000463948 FA2HQ7L5A8 372 aa11.56□□□□□ -0.56
EGFR-209ENST00000463948 PSORS1C2Q9UIG4 136 aa11.56□□□□□ -0.56
EGFR-209ENST00000463948 IGLV4-3A0A075B6K6 122 aa11.55□□□□□ -0.56
EGFR-209ENST00000463948 APOMO95445 188 aa11.55□□□□□ -0.56
EGFR-209ENST00000463948 RPL18AQ02543 176 aaKnown RBP11.55□□□□□ -0.56
EGFR-209ENST00000463948 IGIPA6NJ69 53 aa11.54□□□□□ -0.56
EGFR-209ENST00000463948 COLCA2A8K830 154 aa11.54□□□□□ -0.56
EGFR-209ENST00000463948 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.54□□□□□ -0.56
EGFR-209ENST00000463948 NPSP0C0P6 89 aa11.54□□□□□ -0.56
EGFR-209ENST00000463948 PHF5AQ7RTV0 110 aaKnown RBP11.54□□□□□ -0.56
EGFR-209ENST00000463948 TOMM6Q96B49 74 aa11.54□□□□□ -0.56
EGFR-209ENST00000463948 IFITM10A6NMD0 228 aa11.53□□□□□ -0.56
EGFR-209ENST00000463948 TMEM141Q96I45 108 aa11.53□□□□□ -0.56
EGFR-209ENST00000463948 C2orf48Q96LS8 159 aa11.53□□□□□ -0.56
EGFR-209ENST00000463948 LINC01549A6NIU2 74 aa11.52□□□□□ -0.57
EGFR-209ENST00000463948 C1orf137Q5JT78 98 aa11.52□□□□□ -0.57
EGFR-209ENST00000463948 SCO1O75880 301 aa11.51□□□□□ -0.57
EGFR-209ENST00000463948 LINC00614P0C842 121 aa11.51□□□□□ -0.57
EGFR-209ENST00000463948 SPAG11BQ08648 103 aa11.51□□□□□ -0.57
EGFR-209ENST00000463948 Q6ZN92 141 aa11.51□□□□□ -0.57
EGFR-209ENST00000463948 URB1-AS1Q96HZ7 61 aa11.51□□□□□ -0.57
EGFR-209ENST00000463948 TIMM17AQ99595 171 aa11.51□□□□□ -0.57
EGFR-209ENST00000463948 TRGC2P03986 189 aa11.5□□□□□ -0.57
EGFR-209ENST00000463948 RAB5BP61020 215 aa11.5□□□□□ -0.57
EGFR-209ENST00000463948 TEX43Q6ZNM6 134 aa11.5□□□□□ -0.57
EGFR-209ENST00000463948 ERASQ7Z444 233 aa11.5□□□□□ -0.57
EGFR-209ENST00000463948 PAPPA-AS1Q5QFB9 102 aa11.49□□□□□ -0.57
EGFR-209ENST00000463948 LINC00173Q6ZV60 143 aa11.49□□□□□ -0.57
EGFR-209ENST00000463948 SCGB3A1Q96QR1 104 aa11.49□□□□□ -0.57
EGFR-209ENST00000463948 AMELXQ99217 191 aa11.49□□□□□ -0.57
EGFR-209ENST00000463948 VCX2Q9H322 139 aa11.49□□□□□ -0.57
EGFR-209ENST00000463948 ORAOV1Q8WV07 137 aa11.48□□□□□ -0.57
EGFR-209ENST00000463948 C2orf88Q9BSF0 95 aa11.48□□□□□ -0.57
EGFR-209ENST00000463948 C10orf25Q5T742 122 aa11.47□□□□□ -0.57
EGFR-209ENST00000463948 A0A087WZ39 114 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms