RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 HNRNPA3P51991 378 aaKnown RBP8.2□□□□□ -1.1
XRN1-203ENST00000463916 RPL37AP61513 92 aaKnown RBP8.2□□□□□ -1.1
XRN1-203ENST00000463916 ZC2HC1BQ5TFG8 222 aa8.2□□□□□ -1.1
XRN1-203ENST00000463916 PLAC8Q9NZF1 115 aa8.2□□□□□ -1.1
XRN1-203ENST00000463916 CARHSP1Q9Y2V2 147 aaKnown RBP8.2□□□□□ -1.1
XRN1-203ENST00000463916 TRAV9-1A0A075B6T8 112 aa8.19□□□□□ -1.1
XRN1-203ENST00000463916 MAJINQ3KP22 176 aa8.19□□□□□ -1.1
XRN1-203ENST00000463916 Q6ZRU5 148 aa8.19□□□□□ -1.1
XRN1-203ENST00000463916 C2orf66Q6UXQ4 117 aa8.18□□□□□ -1.1
XRN1-203ENST00000463916 TMEM141Q96I45 108 aa8.18□□□□□ -1.1
XRN1-203ENST00000463916 GNB1LQ9BYB4 327 aa8.18□□□□□ -1.1
XRN1-203ENST00000463916 CYSLTR1Q9Y271 337 aa8.18□□□□□ -1.1
XRN1-203ENST00000463916 S100PP25815 95 aa8.17□□□□□ -1.1
XRN1-203ENST00000463916 LINC00242Q5T6M2 205 aa8.17□□□□□ -1.1
XRN1-203ENST00000463916 LINC00173Q6ZV60 143 aa8.17□□□□□ -1.1
XRN1-203ENST00000463916 STPG4Q8N801 248 aa8.17□□□□□ -1.1
XRN1-203ENST00000463916 NXT2Q9NPJ8 142 aaKnown RBP8.17□□□□□ -1.1
XRN1-203ENST00000463916 RPS10P5Q9NQ39 176 aa8.17□□□□□ -1.1
XRN1-203ENST00000463916 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
XRN1-203ENST00000463916 IGIPA6NJ69 53 aa8.17□□□□□ -1.1
XRN1-203ENST00000463916 ORMDL2Q53FV1 153 aa8.17□□□□□ -1.1
XRN1-203ENST00000463916 CAMK2N2Q96S95 79 aa8.17□□□□□ -1.1
XRN1-203ENST00000463916 APOMO95445 188 aa8.16□□□□□ -1.1
XRN1-203ENST00000463916 SPAG11BQ08648 103 aa8.16□□□□□ -1.1
XRN1-203ENST00000463916 RHEBQ15382 184 aa8.16□□□□□ -1.1
XRN1-203ENST00000463916 A0A0J9YXV3 536 aa8.15□□□□□ -1.1
XRN1-203ENST00000463916 K7EMI3 77 aa8.15□□□□□ -1.1
XRN1-203ENST00000463916 UBE2D1P51668 147 aa8.15□□□□□ -1.1
XRN1-203ENST00000463916 ORAOV1Q8WV07 137 aa8.15□□□□□ -1.1
XRN1-203ENST00000463916 C2orf48Q96LS8 159 aa8.15□□□□□ -1.1
XRN1-203ENST00000463916 AMELXQ99217 191 aa8.15□□□□□ -1.1
XRN1-203ENST00000463916 ALKBH7Q9BT30 221 aaPredicted RBP8.15□□□□□ -1.1
XRN1-203ENST00000463916 FAT3Q8TDW7 4589 aa8.15□□□□□ -1.1
XRN1-203ENST00000463916 TEX43Q6ZNM6 134 aa8.15□□□□□ -1.11
XRN1-203ENST00000463916 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.11
XRN1-203ENST00000463916 KRTAP29-1A8MX34 341 aaPredicted RBP8.14□□□□□ -1.11
XRN1-203ENST00000463916 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
XRN1-203ENST00000463916 A0A087WZ39 114 aa8.14□□□□□ -1.11
XRN1-203ENST00000463916 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.14□□□□□ -1.11
XRN1-203ENST00000463916 PTTG1IPP53801 180 aa8.14□□□□□ -1.11
XRN1-203ENST00000463916 VCX2Q9H322 139 aa8.14□□□□□ -1.11
XRN1-203ENST00000463916 TGIF2-C20orf24A0A0A6YYL0 155 aa8.13□□□□□ -1.11
XRN1-203ENST00000463916 APOC3P02656 99 aa8.13□□□□□ -1.11
XRN1-203ENST00000463916 GAGE2BQ13066 116 aa8.13□□□□□ -1.11
XRN1-203ENST00000463916 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
XRN1-203ENST00000463916 MRPL18Q9H0U6 180 aaKnown RBP8.13□□□□□ -1.11
XRN1-203ENST00000463916 LINC00474Q9P2X8 69 aa8.13□□□□□ -1.11
XRN1-203ENST00000463916 LOC107984640A0A0U1RRK4 108 aa8.12□□□□□ -1.11
XRN1-203ENST00000463916 J3QL48 77 aa8.12□□□□□ -1.11
XRN1-203ENST00000463916 TOMM6Q96B49 74 aa8.12□□□□□ -1.11
XRN1-203ENST00000463916 FABP9Q0Z7S8 132 aa8.12□□□□□ -1.11
XRN1-203ENST00000463916 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
XRN1-203ENST00000463916 Q6ZN92 141 aa8.12□□□□□ -1.11
XRN1-203ENST00000463916 C2orf88Q9BSF0 95 aa8.12□□□□□ -1.11
XRN1-203ENST00000463916 A0A1W2PNN7 141 aa8.11□□□□□ -1.11
XRN1-203ENST00000463916 LINC01546A6NGU7 62 aa8.11□□□□□ -1.11
XRN1-203ENST00000463916 MT-ND6P03923 174 aa8.1□□□□□ -1.11
XRN1-203ENST00000463916 NPSP0C0P6 89 aa8.1□□□□□ -1.11
XRN1-203ENST00000463916 COX19Q49B96 90 aa8.1□□□□□ -1.11
XRN1-203ENST00000463916 TIMM17AQ99595 171 aa8.1□□□□□ -1.11
XRN1-203ENST00000463916 MRPL35Q9NZE8 188 aaKnown RBP8.1□□□□□ -1.11
XRN1-203ENST00000463916 PKIGQ9Y2B9 76 aa8.1□□□□□ -1.11
XRN1-203ENST00000463916 RNF151Q2KHN1 245 aa8.1□□□□□ -1.11
XRN1-203ENST00000463916 C7orf33Q8WU49 177 aa8.1□□□□□ -1.11
XRN1-203ENST00000463916 C6orf48Q9UBA6 75 aa8.1□□□□□ -1.11
XRN1-203ENST00000463916 NDUFA1O15239 70 aa8.09□□□□□ -1.11
XRN1-203ENST00000463916 RPL18AQ02543 176 aaKnown RBP8.09□□□□□ -1.11
XRN1-203ENST00000463916 C2orf82Q6UX34 121 aa8.09□□□□□ -1.11
XRN1-203ENST00000463916 ERASQ7Z444 233 aa8.09□□□□□ -1.11
XRN1-203ENST00000463916 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
XRN1-203ENST00000463916 SCGB3A1Q96QR1 104 aa8.09□□□□□ -1.11
XRN1-203ENST00000463916 G0S2P27469 103 aa8.09□□□□□ -1.11
XRN1-203ENST00000463916 F8WDY8 70 aa8.08□□□□□ -1.12
XRN1-203ENST00000463916 SVBPQ8N300 66 aa8.08□□□□□ -1.12
XRN1-203ENST00000463916 SNAPINO95295 136 aa8.07□□□□□ -1.12
XRN1-203ENST00000463916 OXTP01178 125 aa8.07□□□□□ -1.12
XRN1-203ENST00000463916 PRR3P79522 188 aaKnown RBP8.07□□□□□ -1.12
XRN1-203ENST00000463916 C9orf116Q5BN46 136 aaPredicted RBP8.07□□□□□ -1.12
XRN1-203ENST00000463916 Q6ZRP5 223 aa8.07□□□□□ -1.12
XRN1-203ENST00000463916 URB1-AS1Q96HZ7 61 aa8.07□□□□□ -1.12
XRN1-203ENST00000463916 CDKN2A-AS1Q9UH64 79 aa8.07□□□□□ -1.12
XRN1-203ENST00000463916 PAPPA-AS1Q5QFB9 102 aa8.07□□□□□ -1.12
XRN1-203ENST00000463916 LINC01561Q8N1V8 128 aa8.07□□□□□ -1.12
XRN1-203ENST00000463916 TRAPPC1Q9Y5R8 145 aa8.07□□□□□ -1.12
XRN1-203ENST00000463916 FA2HQ7L5A8 372 aa8.06□□□□□ -1.12
XRN1-203ENST00000463916 TLX1NBP0CAT3 122 aa8.06□□□□□ -1.12
XRN1-203ENST00000463916 NDUFA5Q16718 116 aa8.06□□□□□ -1.12
XRN1-203ENST00000463916 C18orf32Q8TCD1 76 aa8.06□□□□□ -1.12
XRN1-203ENST00000463916 YPEL4Q96NS1 127 aa8.06□□□□□ -1.12
XRN1-203ENST00000463916 A0A096LNJ9 63 aa8.05□□□□□ -1.12
XRN1-203ENST00000463916 FAM168BA1KXE4 195 aa8.05□□□□□ -1.12
XRN1-203ENST00000463916 HERVK_113P63121 156 aa8.05□□□□□ -1.12
XRN1-203ENST00000463916 CST9LQ9H4G1 147 aa8.05□□□□□ -1.12
XRN1-203ENST00000463916 SMCO4Q9NRQ5 59 aa8.05□□□□□ -1.12
XRN1-203ENST00000463916 TOMM7Q9P0U1 55 aa8.05□□□□□ -1.12
XRN1-203ENST00000463916 GEMIN7Q9H840 131 aaKnown RBP8.04□□□□□ -1.12
XRN1-203ENST00000463916 GAGE2EQ4V326 116 aa8.04□□□□□ -1.12
XRN1-203ENST00000463916 GAGE2DQ9UEU5 116 aa8.04□□□□□ -1.12
XRN1-203ENST00000463916 LINC00614P0C842 121 aa8.03□□□□□ -1.12
XRN1-203ENST00000463916 SEC11AP67812 179 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms