RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 IGHV3OR16-9A0A0B4J2B5 98 aa9.19□□□□□ -0.94
PHACTR4-203ENST00000463428 TINCRA0A1B0GVN0 87 aa9.18□□□□□ -0.94
PHACTR4-203ENST00000463428 LRCOL1A6NCL2 159 aa9.18□□□□□ -0.94
PHACTR4-203ENST00000463428 ODF1Q14990 250 aa9.18□□□□□ -0.94
PHACTR4-203ENST00000463428 MAP1LC3CQ9BXW4 147 aa9.18□□□□□ -0.94
PHACTR4-203ENST00000463428 DNAH17Q9UFH2 4485 aa9.18□□□□□ -0.94
PHACTR4-203ENST00000463428 RYR3Q15413 4870 aa9.17□□□□□ -0.94
PHACTR4-203ENST00000463428 SYS1-DBNDD2H3BUS1 97 aa9.17□□□□□ -0.94
PHACTR4-203ENST00000463428 C3orf79P0CE67 100 aa9.17□□□□□ -0.94
PHACTR4-203ENST00000463428 IGLC3P0DOY3 106 aa9.17□□□□□ -0.94
PHACTR4-203ENST00000463428 S100A2P29034 98 aa9.17□□□□□ -0.94
PHACTR4-203ENST00000463428 SPATA12Q7Z6I5 190 aa9.17□□□□□ -0.94
PHACTR4-203ENST00000463428 CHTOPQ9Y3Y2 248 aaKnown RBP9.17□□□□□ -0.94
PHACTR4-203ENST00000463428 IGLV5-45A0A087WSX0 123 aa9.16□□□□□ -0.94
PHACTR4-203ENST00000463428 PSCAO43653 123 aa9.16□□□□□ -0.94
PHACTR4-203ENST00000463428 HERVK_113P63121 156 aa9.16□□□□□ -0.94
PHACTR4-203ENST00000463428 SEC11AP67812 179 aa9.16□□□□□ -0.94
PHACTR4-203ENST00000463428 TNP2Q05952 138 aa9.16□□□□□ -0.94
PHACTR4-203ENST00000463428 WFDC2Q14508 124 aa9.16□□□□□ -0.94
PHACTR4-203ENST00000463428 MRPL35Q9NZE8 188 aaKnown RBP9.16□□□□□ -0.94
PHACTR4-203ENST00000463428 F8VRH5 84 aa9.15□□□□□ -0.94
PHACTR4-203ENST00000463428 H0Y8G0 127 aa9.15□□□□□ -0.94
PHACTR4-203ENST00000463428 C5orf38Q86SI9 138 aa9.15□□□□□ -0.94
PHACTR4-203ENST00000463428 A0A087WZ39 114 aa9.14□□□□□ -0.95
PHACTR4-203ENST00000463428 C11orf86A6NJI1 115 aa9.14□□□□□ -0.95
PHACTR4-203ENST00000463428 PET117Q6UWS5 81 aa9.14□□□□□ -0.95
PHACTR4-203ENST00000463428 GEMIN7Q9H840 131 aaKnown RBP9.14□□□□□ -0.95
PHACTR4-203ENST00000463428 CDKN2A-AS1Q9UH64 79 aa9.14□□□□□ -0.95
PHACTR4-203ENST00000463428 A0A087WTM6 91 aa9.14□□□□□ -0.95
PHACTR4-203ENST00000463428 COX7A2LO14548 114 aa9.14□□□□□ -0.95
PHACTR4-203ENST00000463428 KRTDAPP60985 99 aa9.14□□□□□ -0.95
PHACTR4-203ENST00000463428 LINC01561Q8N1V8 128 aa9.14□□□□□ -0.95
PHACTR4-203ENST00000463428 C15orf56Q8N910 161 aa9.14□□□□□ -0.95
PHACTR4-203ENST00000463428 CHAC1Q9BUX1 264 aa9.14□□□□□ -0.95
PHACTR4-203ENST00000463428 USP17L23D6RBM5 183 aa9.13□□□□□ -0.95
PHACTR4-203ENST00000463428 ZNF22P17026 224 aaPredicted RBP9.13□□□□□ -0.95
PHACTR4-203ENST00000463428 LINC01545Q5VT33 79 aa9.13□□□□□ -0.95
PHACTR4-203ENST00000463428 LINC00336Q6ZUF6 198 aa9.13□□□□□ -0.95
PHACTR4-203ENST00000463428 PMCHL2Q9BQD1 86 aa9.13□□□□□ -0.95
PHACTR4-203ENST00000463428 FAT2Q9NYQ8 4349 aa9.12□□□□□ -0.95
PHACTR4-203ENST00000463428 LECT2O14960 151 aa9.12□□□□□ -0.95
PHACTR4-203ENST00000463428 LINC00469Q8N7U9 141 aa9.12□□□□□ -0.95
PHACTR4-203ENST00000463428 IGHV3-64A0A075B6Q5 118 aa9.11□□□□□ -0.95
PHACTR4-203ENST00000463428 IGHV1-58A0A0C4DH39 117 aa9.1□□□□□ -0.95
PHACTR4-203ENST00000463428 OR10D4PQ8NGN7 298 aa9.1□□□□□ -0.95
PHACTR4-203ENST00000463428 GVQW2A0A096LPI5 108 aaPredicted RBP9.09□□□□□ -0.95
PHACTR4-203ENST00000463428 SMIM1B2RUZ4 78 aa9.09□□□□□ -0.95
PHACTR4-203ENST00000463428 DPM2O94777 84 aa9.09□□□□□ -0.95
PHACTR4-203ENST00000463428 MALP21145 153 aa9.09□□□□□ -0.95
PHACTR4-203ENST00000463428 CFAP161Q6P656 301 aa9.09□□□□□ -0.95
PHACTR4-203ENST00000463428 APOMO95445 188 aa9.08□□□□□ -0.96
PHACTR4-203ENST00000463428 IGKCP01834 107 aa9.08□□□□□ -0.96
PHACTR4-203ENST00000463428 PLNP26678 52 aa9.08□□□□□ -0.96
PHACTR4-203ENST00000463428 KIAA0087Q14695 138 aa9.08□□□□□ -0.96
PHACTR4-203ENST00000463428 TMEM170BQ5T4T1 132 aa9.08□□□□□ -0.96
PHACTR4-203ENST00000463428 Q8N814 137 aa9.08□□□□□ -0.96
PHACTR4-203ENST00000463428 TMEM223A0PJW6 202 aa9.07□□□□□ -0.96
PHACTR4-203ENST00000463428 H3BRM9 83 aa9.07□□□□□ -0.96
PHACTR4-203ENST00000463428 SPINK8P0C7L1 97 aa9.07□□□□□ -0.96
PHACTR4-203ENST00000463428 HIGD2BQ4VC39 106 aa9.07□□□□□ -0.96
PHACTR4-203ENST00000463428 IGLV5-39A0A0G2JS06 123 aa9.06□□□□□ -0.96
PHACTR4-203ENST00000463428 A0A1B0GVY2 172 aa9.06□□□□□ -0.96
PHACTR4-203ENST00000463428 SLPIP03973 132 aa9.06□□□□□ -0.96
PHACTR4-203ENST00000463428 C14orf177Q52M58 125 aa9.06□□□□□ -0.96
PHACTR4-203ENST00000463428 ORAOV1Q8WV07 137 aa9.06□□□□□ -0.96
PHACTR4-203ENST00000463428 DNAH11Q96DT5 4516 aa9.06□□□□□ -0.96
PHACTR4-203ENST00000463428 NTN5Q8WTR8 489 aaPredicted RBP9.05□□□□□ -0.96
PHACTR4-203ENST00000463428 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
PHACTR4-203ENST00000463428 hDV102S1A0JD36 115 aa9.05□□□□□ -0.96
PHACTR4-203ENST00000463428 C20orf202A1L168 122 aa9.05□□□□□ -0.96
PHACTR4-203ENST00000463428 SPAG11BQ08648 103 aa9.05□□□□□ -0.96
PHACTR4-203ENST00000463428 PKD1P98161 4303 aa9.04□□□□□ -0.96
PHACTR4-203ENST00000463428 EREGO14944 169 aa9.04□□□□□ -0.96
PHACTR4-203ENST00000463428 KRTAP10-2P60368 255 aa9.04□□□□□ -0.96
PHACTR4-203ENST00000463428 Q8IZM0 81 aa9.04□□□□□ -0.96
PHACTR4-203ENST00000463428 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.03□□□□□ -0.96
PHACTR4-203ENST00000463428 ZNF561-AS1K7EIQ3 104 aa9.03□□□□□ -0.96
PHACTR4-203ENST00000463428 C2orf48Q96LS8 159 aa9.03□□□□□ -0.96
PHACTR4-203ENST00000463428 CNBPP62633 177 aaKnown RBP9.02□□□□□ -0.97
PHACTR4-203ENST00000463428 ATOH7Q8N100 152 aa9.02□□□□□ -0.97
PHACTR4-203ENST00000463428 COX7B2Q8TF08 81 aa9.02□□□□□ -0.97
PHACTR4-203ENST00000463428 TOMM7Q9P0U1 55 aa9.02□□□□□ -0.97
PHACTR4-203ENST00000463428 HECTD4Q9Y4D8 3996 aa9.01□□□□□ -0.97
PHACTR4-203ENST00000463428 FUSP35637 526 aaKnown RBP eCLIP9.01□□□□□ -0.97
PHACTR4-203ENST00000463428 AKR1D1P51857 326 aa9.01□□□□□ -0.97
PHACTR4-203ENST00000463428 JOSD1Q15040 202 aaPredicted RBP9.01□□□□□ -0.97
PHACTR4-203ENST00000463428 STPG4Q8N801 248 aa9.01□□□□□ -0.97
PHACTR4-203ENST00000463428 F8WDY8 70 aa9□□□□□ -0.97
PHACTR4-203ENST00000463428 SCGB1D1O95968 90 aa9□□□□□ -0.97
PHACTR4-203ENST00000463428 C6orf226Q5I0X4 101 aa9□□□□□ -0.97
PHACTR4-203ENST00000463428 C2orf82Q6UX34 121 aa9□□□□□ -0.97
PHACTR4-203ENST00000463428 PGPEP1Q9NXJ5 209 aa9□□□□□ -0.97
PHACTR4-203ENST00000463428 E9PLD3 99 aa8.99□□□□□ -0.97
PHACTR4-203ENST00000463428 LEPROTO15243 131 aa8.99□□□□□ -0.97
PHACTR4-203ENST00000463428 PRSS2P07478 247 aa8.99□□□□□ -0.97
PHACTR4-203ENST00000463428 SYCNQ0VAF6 134 aa8.99□□□□□ -0.97
PHACTR4-203ENST00000463428 C10orf25Q5T742 122 aa8.99□□□□□ -0.97
PHACTR4-203ENST00000463428 UNQ6190/PRO20217Q6UXQ8 127 aa8.99□□□□□ -0.97
PHACTR4-203ENST00000463428 Q6ZRU5 148 aa8.99□□□□□ -0.97
PHACTR4-203ENST00000463428 CAMK2N2Q96S95 79 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms